RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 MMP19Q99542 508 aa17.84■□□□□ 0.45
SDC3-203ENST00000471567 UBA5Q9GZZ9 404 aa17.84■□□□□ 0.45
SDC3-203ENST00000471567 CCDC69A6NI79 296 aa17.83■□□□□ 0.44
SDC3-203ENST00000471567 HMGCRP04035 888 aa17.83■□□□□ 0.44
SDC3-203ENST00000471567 ELNP15502 786 aa17.83■□□□□ 0.44
SDC3-203ENST00000471567 CCDC174Q6PII3 467 aa17.83■□□□□ 0.44
SDC3-203ENST00000471567 NFXL1Q6ZNB6 911 aa17.83■□□□□ 0.44
SDC3-203ENST00000471567 DPP9Q86TI2 863 aa17.83■□□□□ 0.44
SDC3-203ENST00000471567 SGMS1Q86VZ5 419 aa17.83■□□□□ 0.44
SDC3-203ENST00000471567 ZNF654Q8IZM8 581 aa17.83■□□□□ 0.44
SDC3-203ENST00000471567 AGBL1Q96MI9 1066 aa17.83■□□□□ 0.44
SDC3-203ENST00000471567 JAKMIP1Q96N16 626 aaKnown RBP17.83■□□□□ 0.44
SDC3-203ENST00000471567 GPHNQ9NQX3 736 aaPredicted RBP17.83■□□□□ 0.44
SDC3-203ENST00000471567 BIN2Q9UBW5 565 aaPredicted RBP17.83■□□□□ 0.44
SDC3-203ENST00000471567 MAD2L2Q9UI95 211 aa17.83■□□□□ 0.44
SDC3-203ENST00000471567 ZNF236Q9UL36 1845 aa17.83■□□□□ 0.44
SDC3-203ENST00000471567 KLRF2D3W0D1 207 aa17.82■□□□□ 0.44
SDC3-203ENST00000471567 CALM1P0DP23 149 aa17.82■□□□□ 0.44
SDC3-203ENST00000471567 CALM2P0DP24 149 aa17.82■□□□□ 0.44
SDC3-203ENST00000471567 CALM3P0DP25 149 aa17.82■□□□□ 0.44
SDC3-203ENST00000471567 SLC4A3P48751 1232 aa17.82■□□□□ 0.44
SDC3-203ENST00000471567 SNAP25P60880 206 aa17.82■□□□□ 0.44
SDC3-203ENST00000471567 IFFO2Q5TF58 517 aa17.82■□□□□ 0.44
SDC3-203ENST00000471567 BLOC1S2Q6QNY1 142 aa17.82■□□□□ 0.44
SDC3-203ENST00000471567 ADGRF4Q8IZF3 695 aa17.82■□□□□ 0.44
SDC3-203ENST00000471567 STAG2Q8N3U4 1231 aa17.82■□□□□ 0.44
SDC3-203ENST00000471567 CCPG1Q9ULG6 757 aa17.82■□□□□ 0.44
SDC3-203ENST00000471567 COBLO75128 1261 aa17.81■□□□□ 0.44
SDC3-203ENST00000471567 INHAP05111 366 aa17.81■□□□□ 0.44
SDC3-203ENST00000471567 KIF5BP33176 963 aa17.81■□□□□ 0.44
SDC3-203ENST00000471567 NPLOC4Q8TAT6 608 aa17.81■□□□□ 0.44
SDC3-203ENST00000471567 TRIB2Q92519 343 aa17.81■□□□□ 0.44
SDC3-203ENST00000471567 LRRC2Q9BYS8 371 aa17.81■□□□□ 0.44
SDC3-203ENST00000471567 ACAD9Q9H845 621 aa17.81■□□□□ 0.44
SDC3-203ENST00000471567 RNF146Q9NTX7 359 aa17.81■□□□□ 0.44
SDC3-203ENST00000471567 DIS3Q9Y2L1 958 aaKnown RBP17.81■□□□□ 0.44
SDC3-203ENST00000471567 SLC12A7Q9Y666 1083 aa17.81■□□□□ 0.44
SDC3-203ENST00000471567 ALAS1P13196 640 aa17.8■□□□□ 0.44
SDC3-203ENST00000471567 OLFML2BQ68BL8 750 aa17.8■□□□□ 0.44
SDC3-203ENST00000471567 SYNE3Q6ZMZ3 975 aa17.8■□□□□ 0.44
SDC3-203ENST00000471567 FBXL16Q8N461 479 aa17.8■□□□□ 0.44
SDC3-203ENST00000471567 CTCFLQ8NI51 663 aaPredicted RBP17.8■□□□□ 0.44
SDC3-203ENST00000471567 NUP133Q8WUM0 1156 aa17.8■□□□□ 0.44
SDC3-203ENST00000471567 DDX11Q96FC9 970 aa17.8■□□□□ 0.44
SDC3-203ENST00000471567 TRERF1Q96PN7 1200 aa17.8■□□□□ 0.44
SDC3-203ENST00000471567 LZTS2Q9BRK4 669 aa17.8■□□□□ 0.44
SDC3-203ENST00000471567 TMEM106CQ9BVX2 250 aa17.8■□□□□ 0.44
SDC3-203ENST00000471567 TM6SF1Q9BZW5 370 aa17.8■□□□□ 0.44
SDC3-203ENST00000471567 CPVLQ9H3G5 476 aa17.8■□□□□ 0.44
SDC3-203ENST00000471567 JMJD4Q9H9V9 463 aa17.8■□□□□ 0.44
SDC3-203ENST00000471567 HTTP42858 3142 aa17.79■□□□□ 0.44
SDC3-203ENST00000471567 DNAJC25-GNG10A0A024R161 153 aa17.79■□□□□ 0.44
SDC3-203ENST00000471567 DHX16O60231 1041 aaKnown RBP17.79■□□□□ 0.44
SDC3-203ENST00000471567 IGHA2P01877 340 aa17.79■□□□□ 0.44
SDC3-203ENST00000471567 RPS6KB1P23443 525 aa17.79■□□□□ 0.44
SDC3-203ENST00000471567 SMARCA1P28370 1054 aa17.79■□□□□ 0.44
SDC3-203ENST00000471567 GNAQP50148 359 aa17.79■□□□□ 0.44
SDC3-203ENST00000471567 CDC37Q16543 378 aaPredicted RBP17.79■□□□□ 0.44
SDC3-203ENST00000471567 CCL14Q16627 93 aa17.79■□□□□ 0.44
SDC3-203ENST00000471567 ZNF792Q3KQV3 632 aa17.79■□□□□ 0.44
SDC3-203ENST00000471567 MFSD14CQ5VZR4 134 aa17.79■□□□□ 0.44
SDC3-203ENST00000471567 ANKRD35Q8N283 1001 aa17.79■□□□□ 0.44
SDC3-203ENST00000471567 MTMR8Q96EF0 704 aa17.79■□□□□ 0.44
SDC3-203ENST00000471567 TCEANC2Q96MN5 208 aa17.79■□□□□ 0.44
SDC3-203ENST00000471567 RIOX1Q9H6W3 641 aa17.79■□□□□ 0.44
SDC3-203ENST00000471567 ZSWIM6Q9HCJ5 1215 aa17.79■□□□□ 0.44
SDC3-203ENST00000471567 HOMER2Q9NSB8 354 aa17.79■□□□□ 0.44
SDC3-203ENST00000471567 PGK2P07205 417 aa17.78■□□□□ 0.44
SDC3-203ENST00000471567 CCL5P13501 91 aa17.78■□□□□ 0.44
SDC3-203ENST00000471567 CASTP20810 708 aaKnown RBP17.78■□□□□ 0.44
SDC3-203ENST00000471567 ANAPC15P60006 121 aa17.78■□□□□ 0.44
SDC3-203ENST00000471567 FGD1P98174 961 aa17.78■□□□□ 0.44
SDC3-203ENST00000471567 MTFR1Q15390 333 aa17.78■□□□□ 0.44
SDC3-203ENST00000471567 MAP3K21Q5TCX8 1036 aa17.78■□□□□ 0.44
SDC3-203ENST00000471567 MYL10Q9BUA6 226 aa17.78■□□□□ 0.44
SDC3-203ENST00000471567 MAF1Q9H063 256 aa17.78■□□□□ 0.44
SDC3-203ENST00000471567 VAT1LQ9HCJ6 419 aa17.78■□□□□ 0.44
SDC3-203ENST00000471567 FLRT1Q9NZU1 646 aa17.78■□□□□ 0.44
SDC3-203ENST00000471567 GTF3C3Q9Y5Q9 886 aa17.78■□□□□ 0.44
SDC3-203ENST00000471567 ZNFX1Q9P2E3 1918 aaKnown RBP17.78■□□□□ 0.44
SDC3-203ENST00000471567 PFASO15067 1338 aa17.77■□□□□ 0.44
SDC3-203ENST00000471567 RPTORQ8N122 1335 aa17.77■□□□□ 0.44
SDC3-203ENST00000471567 CAPN15O75808 1086 aa17.77■□□□□ 0.44
SDC3-203ENST00000471567 CPA1P15085 419 aa17.77■□□□□ 0.44
SDC3-203ENST00000471567 RCAN1P53805 252 aa17.77■□□□□ 0.44
SDC3-203ENST00000471567 TRAF1Q13077 416 aa17.77■□□□□ 0.44
SDC3-203ENST00000471567 QRICH1Q2TAL8 776 aa17.77■□□□□ 0.44
SDC3-203ENST00000471567 C8orf34Q49A92 452 aa17.77■□□□□ 0.44
SDC3-203ENST00000471567 MUM1L1Q5H9M0 696 aa17.77■□□□□ 0.44
SDC3-203ENST00000471567 APOA5Q6Q788 366 aa17.77■□□□□ 0.44
SDC3-203ENST00000471567 Q6ZUG5 572 aa17.77■□□□□ 0.44
SDC3-203ENST00000471567 RUFY3Q7L099 469 aa17.77■□□□□ 0.44
SDC3-203ENST00000471567 FANCBQ8NB91 859 aa17.77■□□□□ 0.44
SDC3-203ENST00000471567 MAML3Q96JK9 1138 aa17.77■□□□□ 0.44
SDC3-203ENST00000471567 AGXT2Q9BYV1 514 aa17.77■□□□□ 0.44
SDC3-203ENST00000471567 RNF208Q9H0X6 261 aa17.77■□□□□ 0.44
SDC3-203ENST00000471567 A1CFQ9NQ94 594 aaKnown RBP17.77■□□□□ 0.44
SDC3-203ENST00000471567 ZBTB5O15062 677 aa17.76■□□□□ 0.43
SDC3-203ENST00000471567 GJB1P08034 283 aa17.76■□□□□ 0.43
SDC3-203ENST00000471567 CAPN2P17655 700 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms