RNA–Protein interactions for RNA: ENST00000470535.2

ABCA2-215, Transcript of ATP binding cassette subfamily A member 2, human

TSL 2

Gene ABCA2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-215	ENST00000470535	COL9A3	Q14050	684 aa	Predicted RBP	13.92	□□□□□ -0.18
ABCA2-215	ENST00000470535	TRMT44	Q8IYL2	757 aa	Known RBP	13.92	□□□□□ -0.18
ABCA2-215	ENST00000470535	CHST13	Q8NET6	341 aa		13.92	□□□□□ -0.18
ABCA2-215	ENST00000470535	NUP133	Q8WUM0	1156 aa		13.92	□□□□□ -0.18
ABCA2-215	ENST00000470535	ZNF333	Q96JL9	665 aa		13.92	□□□□□ -0.18
ABCA2-215	ENST00000470535	AGBL1	Q96MI9	1066 aa		13.92	□□□□□ -0.18
ABCA2-215	ENST00000470535	MMP19	Q99542	508 aa		13.92	□□□□□ -0.18
ABCA2-215	ENST00000470535	LRRC2	Q9BYS8	371 aa		13.92	□□□□□ -0.18
ABCA2-215	ENST00000470535	CPVL	Q9H3G5	476 aa		13.92	□□□□□ -0.18
ABCA2-215	ENST00000470535	GPHN	Q9NQX3	736 aa	Predicted RBP	13.92	□□□□□ -0.18
ABCA2-215	ENST00000470535	HOMER2	Q9NSB8	354 aa		13.92	□□□□□ -0.18
ABCA2-215	ENST00000470535	FBXO40	Q9UH90	709 aa		13.92	□□□□□ -0.18
ABCA2-215	ENST00000470535	CCPG1	Q9ULG6	757 aa		13.92	□□□□□ -0.18
ABCA2-215	ENST00000470535	RIPK3	Q9Y572	518 aa		13.92	□□□□□ -0.18
ABCA2-215	ENST00000470535	ZNF536	O15090	1300 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	DDAH1	O94760	285 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	MYC	P01106	439 aa	Predicted RBP	13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	HMGCR	P04035	888 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	ICAM1	P05362	532 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	ALAS1	P13196	640 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	FGD1	P98174	961 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	EXOSC10	Q01780	885 aa	Known RBP	13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	TROAP	Q12815	778 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	GRM4	Q14833	912 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	TKFC	Q3LXA3	575 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	BLOC1S2	Q6QNY1	142 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	ADGRF4	Q8IZF3	695 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	ZNF654	Q8IZM8	581 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	STAG2	Q8N3U4	1231 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	DDX11	Q96FC9	970 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	TCEANC2	Q96MN5	208 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	MAD2L2	Q9UI95	211 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	PNMA2	Q9UL42	364 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	GTF3C3	Q9Y5Q9	886 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	SLC12A7	Q9Y666	1083 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	HTT	P42858	3142 aa		13.91	□□□□□ -0.18
ABCA2-215	ENST00000470535	COL11A1	P12107	1806 aa	Predicted RBP	13.9	□□□□□ -0.18
ABCA2-215	ENST00000470535	PALM3	A6NDB9	673 aa	Predicted RBP	13.9	□□□□□ -0.18
ABCA2-215	ENST00000470535	SLC34A2	O95436	690 aa		13.9	□□□□□ -0.18
ABCA2-215	ENST00000470535	INHA	P05111	366 aa		13.9	□□□□□ -0.18
ABCA2-215	ENST00000470535	HOXC6	P09630	235 aa		13.9	□□□□□ -0.18
ABCA2-215	ENST00000470535	KIF5B	P33176	963 aa		13.9	□□□□□ -0.18
ABCA2-215	ENST00000470535	SYNE3	Q6ZMZ3	975 aa		13.9	□□□□□ -0.18
ABCA2-215	ENST00000470535	ANKRD35	Q8N283	1001 aa		13.9	□□□□□ -0.18
ABCA2-215	ENST00000470535	CTCFL	Q8NI51	663 aa	Predicted RBP	13.9	□□□□□ -0.18
ABCA2-215	ENST00000470535	TRIB2	Q92519	343 aa		13.9	□□□□□ -0.18
ABCA2-215	ENST00000470535	TRERF1	Q96PN7	1200 aa		13.9	□□□□□ -0.18
ABCA2-215	ENST00000470535	MAP3K14	Q99558	947 aa		13.9	□□□□□ -0.18
ABCA2-215	ENST00000470535	MYL10	Q9BUA6	226 aa		13.9	□□□□□ -0.18
ABCA2-215	ENST00000470535	TMEM106C	Q9BVX2	250 aa		13.9	□□□□□ -0.18
ABCA2-215	ENST00000470535	ACAD9	Q9H845	621 aa		13.9	□□□□□ -0.18
ABCA2-215	ENST00000470535	VAT1L	Q9HCJ6	419 aa		13.9	□□□□□ -0.18
ABCA2-215	ENST00000470535	RNF146	Q9NTX7	359 aa		13.9	□□□□□ -0.18
ABCA2-215	ENST00000470535	COBL	O75128	1261 aa		13.89	□□□□□ -0.19
ABCA2-215	ENST00000470535	PGK2	P07205	417 aa		13.89	□□□□□ -0.19
ABCA2-215	ENST00000470535	CALM1	P0DP23	149 aa		13.89	□□□□□ -0.19
ABCA2-215	ENST00000470535	CALM2	P0DP24	149 aa		13.89	□□□□□ -0.19
ABCA2-215	ENST00000470535	CALM3	P0DP25	149 aa		13.89	□□□□□ -0.19
ABCA2-215	ENST00000470535	CPA1	P15085	419 aa		13.89	□□□□□ -0.19
ABCA2-215	ENST00000470535	CAST	P20810	708 aa	Known RBP	13.89	□□□□□ -0.19
ABCA2-215	ENST00000470535	CDC37	Q16543	378 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCA2-215	ENST00000470535	CCL14	Q16627	93 aa		13.89	□□□□□ -0.19
ABCA2-215	ENST00000470535	SGMS1	Q86VZ5	419 aa		13.89	□□□□□ -0.19
ABCA2-215	ENST00000470535	NPLOC4	Q8TAT6	608 aa		13.89	□□□□□ -0.19
ABCA2-215	ENST00000470535	PLXNB2	O15031	1838 aa		13.88	□□□□□ -0.19
ABCA2-215	ENST00000470535	CCL5	P13501	91 aa		13.88	□□□□□ -0.19
ABCA2-215	ENST00000470535	RPS6KB1	P23443	525 aa		13.88	□□□□□ -0.19
ABCA2-215	ENST00000470535	MTFR1	Q15390	333 aa		13.88	□□□□□ -0.19
ABCA2-215	ENST00000470535	MFSD14C	Q5VZR4	134 aa		13.88	□□□□□ -0.19
ABCA2-215	ENST00000470535	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
ABCA2-215	ENST00000470535	RNF208	Q9H0X6	261 aa		13.88	□□□□□ -0.19
ABCA2-215	ENST00000470535	JMJD4	Q9H9V9	463 aa		13.88	□□□□□ -0.19
ABCA2-215	ENST00000470535	RXRA	P19793	462 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	GNAQ	P50148	359 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	TRIM32	Q13049	653 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	QRICH1	Q2TAL8	776 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	USH1G	Q495M9	461 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	MUM1L1	Q5H9M0	696 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	OLFML2B	Q68BL8	750 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	APOA5	Q6Q788	366 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	NSMF	Q6X4W1	530 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535		Q6ZUG5	572 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	RUFY3	Q7L099	469 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	MICU3	Q86XE3	530 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	RAB11FIP4	Q86YS3	637 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	CCDC144CP	Q8IYA2	1237 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	MAML3	Q96JK9	1138 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	LZTS2	Q9BRK4	669 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	FLRT1	Q9NZU1	646 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	DIS3	Q9Y2L1	958 aa	Known RBP	13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	CYP46A1	Q9Y6A2	500 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	ZNF236	Q9UL36	1845 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	PFAS	O15067	1338 aa		13.87	□□□□□ -0.19
ABCA2-215	ENST00000470535	DOCK3	Q8IZD9	2030 aa		13.86	□□□□□ -0.19
ABCA2-215	ENST00000470535	KLF18	A0A0U1RQI7	1052 aa		13.86	□□□□□ -0.19
ABCA2-215	ENST00000470535	ZBTB5	O15062	677 aa		13.86	□□□□□ -0.19
ABCA2-215	ENST00000470535	PRKAR2A	P13861	404 aa	Known RBP	13.86	□□□□□ -0.19
ABCA2-215	ENST00000470535	TAL1	P17542	331 aa	Predicted RBP	13.86	□□□□□ -0.19
ABCA2-215	ENST00000470535	ANAPC15	P60006	121 aa		13.86	□□□□□ -0.19

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