RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 DNM1LO00429 736 aa19.3■□□□□ 0.68
GTF3C2-209ENST00000470115 MYCNP04198 464 aaPredicted RBP19.3■□□□□ 0.68
GTF3C2-209ENST00000470115 SLC16A2P36021 539 aa19.3■□□□□ 0.68
GTF3C2-209ENST00000470115 CCDC174Q6PII3 467 aa19.3■□□□□ 0.68
GTF3C2-209ENST00000470115 TTC14Q96N46 770 aa19.3■□□□□ 0.68
GTF3C2-209ENST00000470115 ZKSCAN3Q9BRR0 538 aa19.3■□□□□ 0.68
GTF3C2-209ENST00000470115 GPCPD1Q9NPB8 672 aa19.3■□□□□ 0.68
GTF3C2-209ENST00000470115 CNPY2Q9Y2B0 182 aa19.3■□□□□ 0.68
GTF3C2-209ENST00000470115 KDM4AO75164 1064 aa19.29■□□□□ 0.68
GTF3C2-209ENST00000470115 ZNF865P0CJ78 1059 aaPredicted RBP19.29■□□□□ 0.68
GTF3C2-209ENST00000470115 ALAS1P13196 640 aa19.29■□□□□ 0.68
GTF3C2-209ENST00000470115 TRERF1Q96PN7 1200 aa19.29■□□□□ 0.68
GTF3C2-209ENST00000470115 PRO3102Q9H379 93 aa19.29■□□□□ 0.68
GTF3C2-209ENST00000470115 ACAD9Q9H845 621 aa19.29■□□□□ 0.68
GTF3C2-209ENST00000470115 RNF146Q9NTX7 359 aa19.29■□□□□ 0.68
GTF3C2-209ENST00000470115 CTNNA3Q9UI47 895 aa19.29■□□□□ 0.68
GTF3C2-209ENST00000470115 SMCHD1A6NHR9 2005 aa19.29■□□□□ 0.68
GTF3C2-209ENST00000470115 FRMPD2Q68DX3 1309 aaPredicted RBP19.28■□□□□ 0.68
GTF3C2-209ENST00000470115 KBTBD13C9JR72 458 aa19.28■□□□□ 0.68
GTF3C2-209ENST00000470115 SNAI1O95863 264 aaPredicted RBP19.28■□□□□ 0.68
GTF3C2-209ENST00000470115 SYN1P17600 705 aa19.28■□□□□ 0.68
GTF3C2-209ENST00000470115 CNTN2Q02246 1040 aa19.28■□□□□ 0.68
GTF3C2-209ENST00000470115 IMMTQ16891 758 aaKnown RBP19.28■□□□□ 0.68
GTF3C2-209ENST00000470115 TKFCQ3LXA3 575 aa19.28■□□□□ 0.68
GTF3C2-209ENST00000470115 MAMDC4Q6UXC1 1216 aa19.28■□□□□ 0.68
GTF3C2-209ENST00000470115 BTNL9Q6UXG8 535 aa19.28■□□□□ 0.68
GTF3C2-209ENST00000470115 MSL3Q8N5Y2 521 aaKnown RBP19.28■□□□□ 0.68
GTF3C2-209ENST00000470115 FGD4Q96M96 766 aa19.28■□□□□ 0.68
GTF3C2-209ENST00000470115 SYNGAP1Q96PV0 1343 aa19.27■□□□□ 0.68
GTF3C2-209ENST00000470115 B4E1Z4 1266 aa19.27■□□□□ 0.68
GTF3C2-209ENST00000470115 RARBP10826 455 aa19.27■□□□□ 0.68
GTF3C2-209ENST00000470115 PDHBP11177 359 aa19.27■□□□□ 0.68
GTF3C2-209ENST00000470115 CHMLP26374 656 aa19.27■□□□□ 0.68
GTF3C2-209ENST00000470115 FXR1P51114 621 aaKnown RBP eCLIP19.27■□□□□ 0.68
GTF3C2-209ENST00000470115 ATN1P54259 1190 aaPredicted RBP19.27■□□□□ 0.68
GTF3C2-209ENST00000470115 LRRC41Q15345 812 aa19.27■□□□□ 0.68
GTF3C2-209ENST00000470115 SYDE2Q5VT97 1194 aa19.27■□□□□ 0.68
GTF3C2-209ENST00000470115 ZNF467Q7Z7K2 595 aaPredicted RBP19.27■□□□□ 0.68
GTF3C2-209ENST00000470115 XPNPEP3Q9NQH7 507 aa19.27■□□□□ 0.68
GTF3C2-209ENST00000470115 POTEB2H3BUK9 544 aa19.26■□□□□ 0.67
GTF3C2-209ENST00000470115 MUM1L1Q5H9M0 696 aa19.26■□□□□ 0.67
GTF3C2-209ENST00000470115 DGKHQ86XP1 1220 aa19.26■□□□□ 0.67
GTF3C2-209ENST00000470115 RANBP17Q9H2T7 1088 aaKnown RBP19.26■□□□□ 0.67
GTF3C2-209ENST00000470115 A1CFQ9NQ94 594 aaKnown RBP19.26■□□□□ 0.67
GTF3C2-209ENST00000470115 ZSWIM5Q9P217 1185 aa19.26■□□□□ 0.67
GTF3C2-209ENST00000470115 CCPG1Q9ULG6 757 aa19.26■□□□□ 0.67
GTF3C2-209ENST00000470115 LAMA4Q16363 1823 aa19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 PGK1P00558 417 aa19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 ICAM1P05362 532 aa19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 SNHG28P0DPA3 235 aa19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 AKR1A1P14550 325 aa19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 ADCYAP1R1P41586 468 aa19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 ZNF543Q08ER8 600 aa19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 CCDC178Q5BJE1 867 aa19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 IQCA1Q86XH1 822 aa19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 FAM133AQ8N9E0 248 aa19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 RUFY2Q8WXA3 655 aa19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 FERMT2Q96AC1 680 aa19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 LENG1Q96BZ8 264 aaPredicted RBP19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 PCDH10Q9P2E7 1040 aa19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 ZHX1Q9UKY1 873 aaPredicted RBP19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 FAM184BQ9ULE4 1060 aa19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 RAD50Q92878 1312 aa19.25■□□□□ 0.67
GTF3C2-209ENST00000470115 NT5C2P49902 561 aa19.24■□□□□ 0.67
GTF3C2-209ENST00000470115 PTH1RQ03431 593 aa19.24■□□□□ 0.67
GTF3C2-209ENST00000470115 ACVR2BQ13705 512 aa19.24■□□□□ 0.67
GTF3C2-209ENST00000470115 ARMCX2Q7L311 632 aa19.24■□□□□ 0.67
GTF3C2-209ENST00000470115 CCDC144CPQ8IYA2 1237 aa19.24■□□□□ 0.67
GTF3C2-209ENST00000470115 ZSCAN10Q96SZ4 725 aaPredicted RBP19.24■□□□□ 0.67
GTF3C2-209ENST00000470115 GDF15Q99988 308 aa19.24■□□□□ 0.67
GTF3C2-209ENST00000470115 KRT23Q9C075 422 aa19.24■□□□□ 0.67
GTF3C2-209ENST00000470115 SOWAHBA6NEL2 793 aa19.23■□□□□ 0.67
GTF3C2-209ENST00000470115 GOLGA8HP0CJ92 632 aa19.23■□□□□ 0.67
GTF3C2-209ENST00000470115 RTP1P59025 263 aa19.23■□□□□ 0.67
GTF3C2-209ENST00000470115 NSMFQ6X4W1 530 aa19.23■□□□□ 0.67
GTF3C2-209ENST00000470115 SLC39A5Q6ZMH5 540 aa19.23■□□□□ 0.67
GTF3C2-209ENST00000470115 ENAHQ8N8S7 591 aaPredicted RBP19.23■□□□□ 0.67
GTF3C2-209ENST00000470115 PNMA1Q8ND90 353 aa19.23■□□□□ 0.67
GTF3C2-209ENST00000470115 ANKS1AQ92625 1134 aa19.23■□□□□ 0.67
GTF3C2-209ENST00000470115 ABHD16BQ9H3Z7 469 aa19.23■□□□□ 0.67
GTF3C2-209ENST00000470115 KAT14Q9H8E8 782 aa19.23■□□□□ 0.67
GTF3C2-209ENST00000470115 CNNM2Q9H8M5 875 aa19.23■□□□□ 0.67
GTF3C2-209ENST00000470115 CYP39A1Q9NYL5 469 aa19.23■□□□□ 0.67
GTF3C2-209ENST00000470115 NEFLP07196 543 aa19.22■□□□□ 0.67
GTF3C2-209ENST00000470115 MAGEA10P43363 369 aaPredicted RBP19.22■□□□□ 0.67
GTF3C2-209ENST00000470115 RNF180Q86T96 592 aa19.22■□□□□ 0.67
GTF3C2-209ENST00000470115 ATP11BQ9Y2G3 1177 aa19.22■□□□□ 0.67
GTF3C2-209ENST00000470115 SGSM2O43147 1006 aa19.21■□□□□ 0.67
GTF3C2-209ENST00000470115 CCDC144BQ3MJ40 725 aa19.21■□□□□ 0.67
GTF3C2-209ENST00000470115 GPATCH4Q5T3I0 446 aaKnown RBP19.21■□□□□ 0.67
GTF3C2-209ENST00000470115 UBA5Q9GZZ9 404 aa19.21■□□□□ 0.67
GTF3C2-209ENST00000470115 CPVLQ9H3G5 476 aa19.21■□□□□ 0.67
GTF3C2-209ENST00000470115 PHF24Q9UPV7 400 aa19.21■□□□□ 0.67
GTF3C2-209ENST00000470115 DDX49Q9Y6V7 483 aaKnown RBP19.21■□□□□ 0.67
GTF3C2-209ENST00000470115 TNKSO95271 1327 aa19.21■□□□□ 0.67
GTF3C2-209ENST00000470115 MCM3APO60318 1980 aa19.21■□□□□ 0.67
GTF3C2-209ENST00000470115 ASB14A6NK59 587 aa19.2■□□□□ 0.66
GTF3C2-209ENST00000470115 NFIBO00712 420 aa19.2■□□□□ 0.66
GTF3C2-209ENST00000470115 ADCY6O43306 1168 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms