RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 CYB5R4Q7L1T6 521 aa10.91□□□□□ -0.66
SHROOM3-203ENST00000469923 CHST3Q7LGC8 479 aa10.91□□□□□ -0.66
SHROOM3-203ENST00000469923 KATNBL1Q9H079 304 aa10.91□□□□□ -0.66
SHROOM3-203ENST00000469923 ZSWIM5Q9P217 1185 aa10.91□□□□□ -0.66
SHROOM3-203ENST00000469923 COL6A3P12111 3177 aa10.91□□□□□ -0.66
SHROOM3-203ENST00000469923 PLIN4Q96Q06 1357 aa10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 A0A0G2JMZ2 1700 aa10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 TRIM43BA6NCK2 446 aa10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 KDM4AO75164 1064 aa10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 CHMLP26374 656 aa10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 KCTD2Q14681 263 aa10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 STOX1Q6ZVD7 989 aa10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 EEPD1Q7L9B9 569 aa10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 TRMT44Q8IYL2 757 aaKnown RBP10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 ABRAQ8N0Z2 381 aa10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 TRIM43Q96BQ3 446 aaPredicted RBP10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 DDX11Q96FC9 970 aa10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 GMCL1Q96IK5 515 aa10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 TRERF1Q96PN7 1200 aa10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 GDF15Q99988 308 aa10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 HTATIP2Q9BUP3 242 aa10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 TEX13BQ9BXU2 312 aa10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 A1CFQ9NQ94 594 aaKnown RBP10.9□□□□□ -0.66
SHROOM3-203ENST00000469923 MYH4Q9Y623 1939 aa10.9□□□□□ -0.67
SHROOM3-203ENST00000469923 NFIBO00712 420 aa10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 CTAGE5O15320 804 aa10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 SEPT4O43236 478 aa10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 SLC3A2P08195 630 aaKnown RBP10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 EPHB4P54760 987 aa10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 RTP1P59025 263 aa10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 BEX3Q00994 111 aa10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 IKQ13123 557 aaPredicted RBP10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 CCDC96Q2M329 555 aa10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 LRRFIP1Q32MZ4 808 aaKnown RBP10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 SLC39A5Q6ZMH5 540 aa10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 MFSD6Q6ZSS7 791 aa10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 CCDC144CPQ8IYA2 1237 aa10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 FAM133AQ8N9E0 248 aa10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 ANKLE1Q8NAG6 615 aa10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 CLEC4DQ8WXI8 215 aa10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 VAT1LQ9HCJ6 419 aa10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 RNF146Q9NTX7 359 aa10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 NR2E3Q9Y5X4 410 aa10.89□□□□□ -0.67
SHROOM3-203ENST00000469923 ZNF213O14771 459 aa10.88□□□□□ -0.67
SHROOM3-203ENST00000469923 ATP2A1O14983 1001 aa10.88□□□□□ -0.67
SHROOM3-203ENST00000469923 PDHBP11177 359 aa10.88□□□□□ -0.67
SHROOM3-203ENST00000469923 TOP1P11387 765 aaKnown RBP10.88□□□□□ -0.67
SHROOM3-203ENST00000469923 ACVR2BQ13705 512 aa10.88□□□□□ -0.67
SHROOM3-203ENST00000469923 BAATQ14032 418 aaPredicted RBP10.88□□□□□ -0.67
SHROOM3-203ENST00000469923 TRIM60Q495X7 471 aa10.88□□□□□ -0.67
SHROOM3-203ENST00000469923 Q7L0L9 218 aa10.88□□□□□ -0.67
SHROOM3-203ENST00000469923 ANKRD35Q8N283 1001 aa10.88□□□□□ -0.67
SHROOM3-203ENST00000469923 STAG2Q8N3U4 1231 aa10.88□□□□□ -0.67
SHROOM3-203ENST00000469923 ZFP91Q96JP5 570 aaPredicted RBP10.88□□□□□ -0.67
SHROOM3-203ENST00000469923 DIAPH3Q9NSV4 1193 aa10.88□□□□□ -0.67
SHROOM3-203ENST00000469923 TCP11L1Q9NUJ3 509 aa10.88□□□□□ -0.67
SHROOM3-203ENST00000469923 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.88□□□□□ -0.67
SHROOM3-203ENST00000469923 ZHX1Q9UKY1 873 aaPredicted RBP10.88□□□□□ -0.67
SHROOM3-203ENST00000469923 ATP11BQ9Y2G3 1177 aa10.88□□□□□ -0.67
SHROOM3-203ENST00000469923 MCM3APO60318 1980 aa10.87□□□□□ -0.67
SHROOM3-203ENST00000469923 ADAMTS4O75173 837 aa10.87□□□□□ -0.67
SHROOM3-203ENST00000469923 TLE2Q04725 743 aa10.87□□□□□ -0.67
SHROOM3-203ENST00000469923 ZNF543Q08ER8 600 aa10.87□□□□□ -0.67
SHROOM3-203ENST00000469923 AAMPQ13685 434 aa10.87□□□□□ -0.67
SHROOM3-203ENST00000469923 KCNA10Q16322 511 aa10.87□□□□□ -0.67
SHROOM3-203ENST00000469923 CCDC144BQ3MJ40 725 aa10.87□□□□□ -0.67
SHROOM3-203ENST00000469923 SYDE2Q5VT97 1194 aa10.87□□□□□ -0.67
SHROOM3-203ENST00000469923 CCSAPQ6IQ19 270 aaPredicted RBP10.87□□□□□ -0.67
SHROOM3-203ENST00000469923 MAMDC4Q6UXC1 1216 aa10.87□□□□□ -0.67
SHROOM3-203ENST00000469923 BTNL9Q6UXG8 535 aa10.87□□□□□ -0.67
SHROOM3-203ENST00000469923 NSMFQ6X4W1 530 aa10.87□□□□□ -0.67
SHROOM3-203ENST00000469923 ENAHQ8N8S7 591 aaPredicted RBP10.87□□□□□ -0.67
SHROOM3-203ENST00000469923 CHURC1Q8WUH1 139 aa10.87□□□□□ -0.67
SHROOM3-203ENST00000469923 ZNF287Q9HBT7 754 aa10.87□□□□□ -0.67
SHROOM3-203ENST00000469923 XPNPEP3Q9NQH7 507 aa10.87□□□□□ -0.67
SHROOM3-203ENST00000469923 CYP39A1Q9NYL5 469 aa10.87□□□□□ -0.67
SHROOM3-203ENST00000469923 POTEB2H3BUK9 544 aa10.86□□□□□ -0.67
SHROOM3-203ENST00000469923 PPP1R11O60927 126 aaPredicted RBP10.86□□□□□ -0.67
SHROOM3-203ENST00000469923 CYP21A2P08686 494 aa10.86□□□□□ -0.67
SHROOM3-203ENST00000469923 STAT2P52630 851 aa10.86□□□□□ -0.67
SHROOM3-203ENST00000469923 C9orf50Q5SZB4 431 aa10.86□□□□□ -0.67
SHROOM3-203ENST00000469923 TAPT1Q6NXT6 567 aa10.86□□□□□ -0.67
SHROOM3-203ENST00000469923 SLC30A10Q6XR72 485 aa10.86□□□□□ -0.67
SHROOM3-203ENST00000469923 ARMCX2Q7L311 632 aa10.86□□□□□ -0.67
SHROOM3-203ENST00000469923 FBXO16Q8IX29 292 aaPredicted RBP10.86□□□□□ -0.67
SHROOM3-203ENST00000469923 KLHDC9Q8NEP7 349 aa10.86□□□□□ -0.67
SHROOM3-203ENST00000469923 DCAF4Q8WV16 495 aa10.86□□□□□ -0.67
SHROOM3-203ENST00000469923 COPS5Q92905 334 aa10.86□□□□□ -0.67
SHROOM3-203ENST00000469923 RANBP17Q9H2T7 1088 aaKnown RBP10.86□□□□□ -0.67
SHROOM3-203ENST00000469923 CCPG1Q9ULG6 757 aa10.86□□□□□ -0.67
SHROOM3-203ENST00000469923 CTDP1Q9Y5B0 961 aaPredicted RBP10.86□□□□□ -0.67
SHROOM3-203ENST00000469923 BAZ2BQ9UIF8 2168 aaKnown RBP10.86□□□□□ -0.67
SHROOM3-203ENST00000469923 GRIN2DO15399 1336 aa10.85□□□□□ -0.67
SHROOM3-203ENST00000469923 DNM1LO00429 736 aa10.85□□□□□ -0.67
SHROOM3-203ENST00000469923 SNHG28P0DPA3 235 aa10.85□□□□□ -0.67
SHROOM3-203ENST00000469923 SMPD1P17405 629 aa10.85□□□□□ -0.67
SHROOM3-203ENST00000469923 ANTXR2P58335 489 aa10.85□□□□□ -0.67
SHROOM3-203ENST00000469923 SEC23AQ15436 765 aa10.85□□□□□ -0.67
SHROOM3-203ENST00000469923 FAM160B2Q86V87 743 aa10.85□□□□□ -0.67
SHROOM3-203ENST00000469923 RAB11FIP4Q86YS3 637 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms