RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 TULP2O00295 520 aa11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 PES1O00541 588 aaKnown RBP11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 SLURP2P0DP57 97 aa11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 IBSPP21815 317 aaPredicted RBP11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 NDUFA8P51970 172 aa11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 CTDSPL2Q05D32 466 aa11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 PPARAQ07869 468 aa11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 CDCA5Q96FF9 252 aa11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 LLPHQ9BRT6 129 aaKnown RBP11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 RABEP2Q9H5N1 569 aa11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 GPHNQ9NQX3 736 aaPredicted RBP11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 ZNF213O14771 459 aa11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 HNRNPH2P55795 449 aaKnown RBP11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 IMMTQ16891 758 aaKnown RBP11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 MIGA2Q7L4E1 593 aa11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 DYNLL2Q96FJ2 89 aa11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 TNNT3P45378 269 aaPredicted RBP11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 FMR1Q06787 632 aaKnown RBP eCLIP11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 NCAPHQ15003 741 aa11.31□□□□□ -0.6
SEMA4D-215ENST00000469653 FAM196BA6NMK8 535 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 MARCKSP29966 332 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 SUPT20HL1Q3ZLR7 823 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 CRACR2BQ8N4Y2 399 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 NEK11Q8NG66 645 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 TRIM34Q9BYJ4 488 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 CALCOCO1Q9P1Z2 691 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 KIAA1468Q9P260 1216 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 SERPINB13Q9UIV8 391 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 URI1O94763 535 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 TOMM70O94826 608 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 SFPQP23246 707 aaKnown RBP eCLIP11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 SPECC1Q5M775 1068 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 RALYLQ86SE5 291 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 ACRBPQ8NEB7 543 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 SRRTQ9BXP5 876 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 NAT10Q9H0A0 1025 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 FRMD4BQ9Y2L6 1034 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 SEC31AO94979 1220 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 ITGBL1O95965 494 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 TRIM65Q6PJ69 517 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 FOXP4Q8IVH2 680 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 CCDC150Q8NCX0 1101 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 SMC1BQ8NDV3 1235 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 CPLX3Q8WVH0 158 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 MRPS27Q92552 414 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 NBPF3Q9H094 633 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 EHD4Q9H223 541 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 INCENPQ9NQS7 918 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 ORC3Q9UBD5 711 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 ANAPC4Q9UJX5 808 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 FZD1Q9UP38 647 aa11.3□□□□□ -0.6
SEMA4D-215ENST00000469653 TRPM7Q96QT4 1865 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 SSC5DA1L4H1 1573 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 COBLO75128 1261 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 SLC3A2P08195 630 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 ETF1P62495 437 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 PRKG1Q13976 671 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 TTC30BQ8N4P2 665 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 SLC44A5Q8NCS7 719 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 ZNF396Q96N95 335 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 SPOCK3Q9BQ16 436 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 HSD3B7Q9H2F3 369 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 ZNF408Q9H9D4 720 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 DNAI1Q9UI46 699 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 PHACTR2O75167 634 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 STK10O94804 968 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 FDPSP14324 419 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 FKBP15Q5T1M5 1219 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 DHX32Q7L7V1 743 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 RBM46Q8TBY0 533 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 HOOK2Q96ED9 719 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 ROBO3Q96MS0 1386 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 ATP1A3P13637 1013 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 NF2P35240 595 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 KCNJ6P48051 423 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 EXOSC10Q01780 885 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 GABPAQ06546 454 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 ADALQ6DHV7 355 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 NFXL1Q6ZNB6 911 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 C16orf86Q6ZW13 317 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 METTL16Q86W50 562 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 TBC1D10CQ8IV04 446 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 CEP120Q8N960 986 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 DNAJC18Q9H819 358 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 HERC5Q9UII4 1024 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 CLIC4Q9Y696 253 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 TACC3Q9Y6A5 838 aa11.29□□□□□ -0.6
SEMA4D-215ENST00000469653 CPLX1O14810 134 aa11.28□□□□□ -0.6
SEMA4D-215ENST00000469653 CDK8P49336 464 aa11.28□□□□□ -0.6
SEMA4D-215ENST00000469653 CXorf38Q8TB03 319 aa11.28□□□□□ -0.6
SEMA4D-215ENST00000469653 BPIFA3Q9BQP9 254 aa11.28□□□□□ -0.6
SEMA4D-215ENST00000469653 AGXT2Q9BYV1 514 aa11.28□□□□□ -0.6
SEMA4D-215ENST00000469653 CREB3O43889 395 aa11.28□□□□□ -0.6
SEMA4D-215ENST00000469653 TBC1D12O60347 775 aa11.28□□□□□ -0.6
SEMA4D-215ENST00000469653 PRDM1O75626 825 aa11.28□□□□□ -0.6
SEMA4D-215ENST00000469653 SASH3O75995 380 aa11.28□□□□□ -0.6
SEMA4D-215ENST00000469653 PDE4BQ07343 736 aa11.28□□□□□ -0.6
SEMA4D-215ENST00000469653 LONRF3Q496Y0 759 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms