RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 KLRC4O43908 158 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 RNF40O75150 1001 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 BMP15O95972 392 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 TFAP4Q01664 338 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 LEKR1Q6ZMV7 388 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 ANKRD18AQ8IVF6 992 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 CCDC148Q8NFR7 591 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 ZNF507Q8TCN5 953 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 HDAC7Q8WUI4 952 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 NSUN4Q96CB9 384 aaKnown RBP13.55□□□□□ -0.24
VARS2-205ENST00000469358 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.55□□□□□ -0.24
VARS2-205ENST00000469358 SAR1BQ9Y6B6 198 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 BCL9LQ86UU0 1499 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 EIF3JO75822 258 aaKnown RBP13.55□□□□□ -0.24
VARS2-205ENST00000469358 DDAH1O94760 285 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 SYF2O95926 243 aaKnown RBP13.55□□□□□ -0.24
VARS2-205ENST00000469358 CXCR5P32302 372 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 STK4Q13043 487 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 CAVIN4Q5BKX8 364 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 CSGALNACT2Q8N6G5 542 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 CAGE1Q8TC20 777 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 JAKMIP2Q96AA8 810 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 MTA3Q9BTC8 594 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 BRIP1Q9BX63 1249 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 POLD4Q9HCU8 107 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 JADE2Q9NQC1 790 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 IL17RBQ9NRM6 502 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 DOCK2Q92608 1830 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 BCORQ6W2J9 1755 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 ZNF804BA4D1E1 1349 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 UBA7P41226 1012 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 USP14P54578 494 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 SPAG1Q07617 926 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 CT47A1Q5JQC4 288 aaPredicted RBP13.55□□□□□ -0.24
VARS2-205ENST00000469358 DTHD1Q6ZMT9 781 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 ANKRD13CQ8N6S4 541 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 UIMC1Q96RL1 719 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 DUSP9Q99956 384 aaKnown RBP13.55□□□□□ -0.24
VARS2-205ENST00000469358 DUOX1Q9NRD9 1551 aa13.55□□□□□ -0.24
VARS2-205ENST00000469358 POTEB2H3BUK9 544 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 EPHB6O15197 1021 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 PPP2R5BQ15173 497 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 ANKRD40Q6AI12 368 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 TUBGCP2Q9BSJ2 902 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 EHD4Q9H223 541 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 NHEJ1Q9H9Q4 299 aaPredicted RBP13.54□□□□□ -0.24
VARS2-205ENST00000469358 ITGB4P16144 1822 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 LRP5O75197 1615 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 CCDC194A0A1B0GVG4 234 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 H7C1D1 291 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 ZNF263O14978 683 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 CYTH3O43739 400 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 CALM1P0DP23 149 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 CALM2P0DP24 149 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 CALM3P0DP25 149 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 TBC1D8BQ0IIM8 1120 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 LRRC31Q6UY01 552 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 SRLQ86TD4 932 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 MYH13Q9UKX3 1938 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 TTC19Q6DKK2 380 aaPredicted RBP13.54□□□□□ -0.24
VARS2-205ENST00000469358 TTI2Q6NXR4 508 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 DNAJC7Q99615 494 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 MLXIPQ9HAP2 919 aa13.54□□□□□ -0.24
VARS2-205ENST00000469358 LOC102724428A0A0B4J2F2 783 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 PLCG1P19174 1290 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 GGCXP38435 758 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 DNA2P51530 1060 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 SIK1P57059 783 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 SLC7A5Q01650 507 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 PPARDQ03181 441 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 TSR1Q2NL82 804 aaKnown RBP13.53□□□□□ -0.24
VARS2-205ENST00000469358 PNMA1Q8ND90 353 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 KAT14Q9H8E8 782 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 VAT1LQ9HCJ6 419 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 RMND1Q9NWS8 449 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 LRWD1Q9UFC0 647 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 CAPN11Q9UMQ6 739 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 PCDHA6Q9UN73 950 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 PCDHA8Q9Y5H6 950 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 PSMD14O00487 310 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 KCNQ2O43526 872 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 IDEP14735 1019 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 FAM207AQ9NSI2 230 aaPredicted RBP13.53□□□□□ -0.24
VARS2-205ENST00000469358 MAGEC2Q9UBF1 373 aaPredicted RBP13.53□□□□□ -0.24
VARS2-205ENST00000469358 STX8Q9UNK0 236 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 DISP2A7MBM2 1401 aa13.53□□□□□ -0.24
VARS2-205ENST00000469358 ZPR1O75312 459 aa13.52□□□□□ -0.24
VARS2-205ENST00000469358 LONP1P36776 959 aaKnown RBP13.52□□□□□ -0.24
VARS2-205ENST00000469358 PDE4DQ08499 809 aa13.52□□□□□ -0.24
VARS2-205ENST00000469358 TXNRD1Q16881 649 aa13.52□□□□□ -0.24
VARS2-205ENST00000469358 LETM2Q2VYF4 491 aa13.52□□□□□ -0.24
VARS2-205ENST00000469358 COG1Q8WTW3 980 aa13.52□□□□□ -0.24
VARS2-205ENST00000469358 RRP36Q96EU6 259 aaKnown RBP13.52□□□□□ -0.24
VARS2-205ENST00000469358 HAUS4Q9H6D7 363 aa13.52□□□□□ -0.24
VARS2-205ENST00000469358 PSD3Q9NYI0 1048 aa13.52□□□□□ -0.24
VARS2-205ENST00000469358 SAP30BPQ9UHR5 308 aaKnown RBP13.52□□□□□ -0.24
VARS2-205ENST00000469358 HPCAL4Q9UM19 191 aa13.52□□□□□ -0.24
VARS2-205ENST00000469358 PCDHA4Q9UN74 947 aa13.52□□□□□ -0.24
VARS2-205ENST00000469358 FGRP09769 529 aa13.52□□□□□ -0.25
VARS2-205ENST00000469358 MTIF2P46199 727 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms