RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 HSPD1P10809 573 aaKnown RBP17.52■□□□□ 0.4
SDCCAG3-209ENST00000468963 TLE2Q04725 743 aa17.52■□□□□ 0.4
SDCCAG3-209ENST00000468963 ACVR2BQ13705 512 aa17.52■□□□□ 0.4
SDCCAG3-209ENST00000468963 CCSAPQ6IQ19 270 aaPredicted RBP17.52■□□□□ 0.4
SDCCAG3-209ENST00000468963 KCTD1Q719H9 257 aa17.52■□□□□ 0.4
SDCCAG3-209ENST00000468963 SH3RF1Q7Z6J0 888 aa17.52■□□□□ 0.4
SDCCAG3-209ENST00000468963 LENG1Q96BZ8 264 aaPredicted RBP17.52■□□□□ 0.4
SDCCAG3-209ENST00000468963 CHMP4CQ96CF2 233 aa17.52■□□□□ 0.4
SDCCAG3-209ENST00000468963 AGBL1Q96MI9 1066 aa17.52■□□□□ 0.4
SDCCAG3-209ENST00000468963 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.52■□□□□ 0.4
SDCCAG3-209ENST00000468963 TRIM43BA6NCK2 446 aa17.51■□□□□ 0.39
SDCCAG3-209ENST00000468963 DUSP11O75319 330 aaKnown RBP17.51■□□□□ 0.39
SDCCAG3-209ENST00000468963 CNTN2Q02246 1040 aa17.51■□□□□ 0.39
SDCCAG3-209ENST00000468963 NMIQ13287 307 aaPredicted RBP17.51■□□□□ 0.39
SDCCAG3-209ENST00000468963 ZNF589Q86UQ0 364 aaPredicted RBP17.51■□□□□ 0.39
SDCCAG3-209ENST00000468963 FAM133AQ8N9E0 248 aa17.51■□□□□ 0.39
SDCCAG3-209ENST00000468963 TRIM43Q96BQ3 446 aaPredicted RBP17.51■□□□□ 0.39
SDCCAG3-209ENST00000468963 KATNBL1Q9H079 304 aa17.51■□□□□ 0.39
SDCCAG3-209ENST00000468963 ABHD16BQ9H3Z7 469 aa17.51■□□□□ 0.39
SDCCAG3-209ENST00000468963 PDLIM7Q9NR12 457 aa17.51■□□□□ 0.39
SDCCAG3-209ENST00000468963 TCP11L1Q9NUJ3 509 aa17.51■□□□□ 0.39
SDCCAG3-209ENST00000468963 PRR12Q9ULL5 1215 aa17.51■□□□□ 0.39
SDCCAG3-209ENST00000468963 A0A1W2PQ45 241 aaPredicted RBP17.5■□□□□ 0.39
SDCCAG3-209ENST00000468963 A0A1W2PQY0 241 aa17.5■□□□□ 0.39
SDCCAG3-209ENST00000468963 TKFCQ3LXA3 575 aa17.5■□□□□ 0.39
SDCCAG3-209ENST00000468963 B4GALNT3Q6L9W6 998 aa17.5■□□□□ 0.39
SDCCAG3-209ENST00000468963 Q7L0L9 218 aa17.5■□□□□ 0.39
SDCCAG3-209ENST00000468963 PLEKHM2Q8IWE5 1019 aa17.5■□□□□ 0.39
SDCCAG3-209ENST00000468963 DEFB123Q8N688 67 aa17.5■□□□□ 0.39
SDCCAG3-209ENST00000468963 OSBPL3Q9H4L5 887 aa17.5■□□□□ 0.39
SDCCAG3-209ENST00000468963 ACAD9Q9H845 621 aa17.5■□□□□ 0.39
SDCCAG3-209ENST00000468963 A1CFQ9NQ94 594 aaKnown RBP17.5■□□□□ 0.39
SDCCAG3-209ENST00000468963 HOMER2Q9NSB8 354 aa17.5■□□□□ 0.39
SDCCAG3-209ENST00000468963 ZHX1Q9UKY1 873 aaPredicted RBP17.5■□□□□ 0.39
SDCCAG3-209ENST00000468963 SYNRGQ9UMZ2 1314 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 SOWAHBA6NEL2 793 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 TRIM6-TRIM34B2RNG4 842 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 POTEB2H3BUK9 544 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 ADCY6O43306 1168 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 ACLYP53396 1101 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 SNAP25P60880 206 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 NUCB1Q02818 461 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 IKQ13123 557 aaPredicted RBP17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 KCNA10Q16322 511 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 CCDC144BQ3MJ40 725 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 BTNL9Q6UXG8 535 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 ARMCX2Q7L311 632 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 RASGRP2Q7LDG7 609 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 CHD1LQ86WJ1 897 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 DCAF4Q8WV16 495 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 BADQ92934 168 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 YTHDC1Q96MU7 727 aaKnown RBP17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 TRERF1Q96PN7 1200 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 TMEM47Q9BQJ4 181 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 PRDM5Q9NQX1 630 aaPredicted RBP17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 RNF146Q9NTX7 359 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 MTMR10Q9NXD2 777 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 ISY1Q9ULR0 285 aaKnown RBP17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 MCM3APO60318 1980 aa17.49■□□□□ 0.39
SDCCAG3-209ENST00000468963 ZMYM6O95789 1325 aa17.48■□□□□ 0.39
SDCCAG3-209ENST00000468963 MYADML2A6NDP7 307 aa17.48■□□□□ 0.39
SDCCAG3-209ENST00000468963 SDSP20132 328 aa17.48■□□□□ 0.39
SDCCAG3-209ENST00000468963 ITGB8P26012 769 aa17.48■□□□□ 0.39
SDCCAG3-209ENST00000468963 CST5P28325 142 aaPredicted RBP17.48■□□□□ 0.39
SDCCAG3-209ENST00000468963 GJA9P57773 515 aa17.48■□□□□ 0.39
SDCCAG3-209ENST00000468963 IRX5P78411 483 aaPredicted RBP17.48■□□□□ 0.39
SDCCAG3-209ENST00000468963 SHHQ15465 462 aa17.48■□□□□ 0.39
SDCCAG3-209ENST00000468963 TTBK2Q6IQ55 1244 aa17.48■□□□□ 0.39
SDCCAG3-209ENST00000468963 CCDC144CPQ8IYA2 1237 aa17.48■□□□□ 0.39
SDCCAG3-209ENST00000468963 EXOC6Q8TAG9 804 aa17.48■□□□□ 0.39
SDCCAG3-209ENST00000468963 RILPL2Q969X0 211 aa17.48■□□□□ 0.39
SDCCAG3-209ENST00000468963 UPF3AQ9H1J1 476 aaKnown RBP17.48■□□□□ 0.39
SDCCAG3-209ENST00000468963 CCDC171Q6TFL3 1326 aa17.47■□□□□ 0.39
SDCCAG3-209ENST00000468963 MOXD2PA6NHM9 499 aa17.47■□□□□ 0.39
SDCCAG3-209ENST00000468963 KIAA0355O15063 1070 aa17.47■□□□□ 0.39
SDCCAG3-209ENST00000468963 TOP1P11387 765 aaKnown RBP17.47■□□□□ 0.39
SDCCAG3-209ENST00000468963 ALAS1P13196 640 aa17.47■□□□□ 0.39
SDCCAG3-209ENST00000468963 NKX3-2P78367 333 aa17.47■□□□□ 0.39
SDCCAG3-209ENST00000468963 MUM1L1Q5H9M0 696 aa17.47■□□□□ 0.39
SDCCAG3-209ENST00000468963 RRP12Q5JTH9 1297 aaKnown RBP17.47■□□□□ 0.39
SDCCAG3-209ENST00000468963 CCDC174Q6PII3 467 aa17.47■□□□□ 0.39
SDCCAG3-209ENST00000468963 ANKRD33Q7Z3H0 272 aa17.47■□□□□ 0.39
SDCCAG3-209ENST00000468963 NUP133Q8WUM0 1156 aa17.47■□□□□ 0.39
SDCCAG3-209ENST00000468963 TOX2Q96NM4 488 aa17.47■□□□□ 0.39
SDCCAG3-209ENST00000468963 LTBP2Q14767 1821 aa17.47■□□□□ 0.39
SDCCAG3-209ENST00000468963 CTAGE5O15320 804 aa17.46■□□□□ 0.39
SDCCAG3-209ENST00000468963 CLTBP09497 229 aa17.46■□□□□ 0.39
SDCCAG3-209ENST00000468963 PCP11498 1178 aaKnown RBP17.46■□□□□ 0.39
SDCCAG3-209ENST00000468963 CDK7P50613 346 aa17.46■□□□□ 0.39
SDCCAG3-209ENST00000468963 HAND2P61296 217 aa17.46■□□□□ 0.39
SDCCAG3-209ENST00000468963 C9orf50Q5SZB4 431 aa17.46■□□□□ 0.39
SDCCAG3-209ENST00000468963 AKNAD1Q5T1N1 836 aa17.46■□□□□ 0.39
SDCCAG3-209ENST00000468963 FAM109BQ6ICB4 259 aaPredicted RBP17.46■□□□□ 0.39
SDCCAG3-209ENST00000468963 TTC14Q96N46 770 aa17.46■□□□□ 0.39
SDCCAG3-209ENST00000468963 RANBP17Q9H2T7 1088 aaKnown RBP17.46■□□□□ 0.39
SDCCAG3-209ENST00000468963 STARD7Q9NQZ5 370 aa17.46■□□□□ 0.39
SDCCAG3-209ENST00000468963 TOMM22Q9NS69 142 aa17.46■□□□□ 0.39
SDCCAG3-209ENST00000468963 CYP39A1Q9NYL5 469 aa17.46■□□□□ 0.39
SDCCAG3-209ENST00000468963 MTMR7Q9Y216 660 aa17.46■□□□□ 0.39
SDCCAG3-209ENST00000468963 ASTN1O14525 1302 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms