RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 PRR12Q9ULL5 1215 aa8.46□□□□□ -1.06
SNRPD3-205ENST00000468770 A0A1W2PPC1 479 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 POTEB2H3BUK9 544 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 SNAI1O95863 264 aaPredicted RBP8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 ZNF865P0CJ78 1059 aaPredicted RBP8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 ALAS1P13196 640 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 PDE4AP27815 886 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 SLC16A2P36021 539 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 ADCYAP1R1P41586 468 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 NT5C2P49902 561 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 SNAP25P60880 206 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 LRRC41Q15345 812 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 IMMTQ16891 758 aaKnown RBP8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 TTC22Q5TAA0 569 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 TTBK2Q6IQ55 1244 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 ZNF467Q7Z7K2 595 aaPredicted RBP8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 RNF180Q86T96 592 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 IQCA1Q86XH1 822 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 TBC1D10CQ8IV04 446 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 DSCC1Q9BVC3 393 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 PRO3102Q9H379 93 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 GPCPD1Q9NPB8 672 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 RNF146Q9NTX7 359 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 PRKAG2Q9UGJ0 569 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 ZHX1Q9UKY1 873 aaPredicted RBP8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 FAM184BQ9ULE4 1060 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 ZNF536O15090 1300 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 FRMPD2Q68DX3 1309 aaPredicted RBP8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 SYNGAP1Q96PV0 1343 aa8.45□□□□□ -1.06
SNRPD3-205ENST00000468770 KDM4AO75164 1064 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 PGK1P00558 417 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 ICAM1P05362 532 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 PDHBP11177 359 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 BMP8BP34820 402 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 MAGEA10P43363 369 aaPredicted RBP8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 RTP1P59025 263 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 CNTN2Q02246 1040 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 ACVR2BQ13705 512 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 CCDC178Q5BJE1 867 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 SYDE2Q5VT97 1194 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 BTNL9Q6UXG8 535 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 SLC39A5Q6ZMH5 540 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 RASGRP2Q7LDG7 609 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 DGKHQ86XP1 1220 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 CCDC144CPQ8IYA2 1237 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 RUFY2Q8WXA3 655 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 FERMT2Q96AC1 680 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 GDF15Q99988 308 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 ZKSCAN3Q9BRR0 538 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 ABHD16BQ9H3Z7 469 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 A1CFQ9NQ94 594 aaKnown RBP8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 CCPG1Q9ULG6 757 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 ATP11BQ9Y2G3 1177 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 SMCHD1A6NHR9 2005 aa8.44□□□□□ -1.06
SNRPD3-205ENST00000468770 ASB14A6NK59 587 aa8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 B4E1Z4 1266 aa8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 GSPT1P15170 499 aaKnown RBP8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 MDM2Q00987 491 aaPredicted RBP8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 ZNF543Q08ER8 600 aa8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 NSMFQ6X4W1 530 aa8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 NOL8Q76FK4 1167 aaKnown RBP8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 ARMCX2Q7L311 632 aa8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 FAM133AQ8N9E0 248 aa8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 ZSCAN10Q96SZ4 725 aaPredicted RBP8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 LBHD1Q9BQE6 289 aaPredicted RBP8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 KRT23Q9C075 422 aa8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 UBE2OQ9C0C9 1292 aaKnown RBP8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 RANBP17Q9H2T7 1088 aaKnown RBP8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 KAT14Q9H8E8 782 aa8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 CNNM2Q9H8M5 875 aa8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 SPC25Q9HBM1 224 aa8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 ZSWIM5Q9P217 1185 aa8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 PCDH10Q9P2E7 1040 aa8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 PNMA2Q9UL42 364 aa8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 PHF24Q9UPV7 400 aa8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 NEDD4P46934 1319 aa8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 PLXNA1Q9UIW2 1896 aa8.43□□□□□ -1.06
SNRPD3-205ENST00000468770 ALPK3Q96L96 1907 aa8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 RANBP2P49792 3224 aaKnown RBP8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 SOWAHBA6NEL2 793 aa8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 DUSP11O75319 330 aaKnown RBP8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 C6orf222P0C671 652 aaPredicted RBP8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 SNHG28P0DPA3 235 aa8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 CHMLP26374 656 aa8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 TRDNQ13061 729 aa8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 KCNA10Q16322 511 aa8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 CCDC144BQ3MJ40 725 aa8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 TRIM60Q495X7 471 aa8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 MUM1L1Q5H9M0 696 aa8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 GPATCH4Q5T3I0 446 aaKnown RBP8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 C1orf53Q5VUE5 145 aa8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 PNMA1Q8ND90 353 aa8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 NUP133Q8WUM0 1156 aa8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 LENG1Q96BZ8 264 aaPredicted RBP8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 FGD4Q96M96 766 aa8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 UBAC1Q9BSL1 405 aa8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 TSEN34Q9BSV6 310 aaKnown RBP8.42□□□□□ -1.06
SNRPD3-205ENST00000468770 PRDM5Q9NQX1 630 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms