RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 PDRG1Q9NUG6 133 aa14.1□□□□□ -0.15
CTNS-205ENST00000467663 EVI5O60447 810 aa14.09□□□□□ -0.15
CTNS-205ENST00000467663 MSCO60682 206 aa14.09□□□□□ -0.15
CTNS-205ENST00000467663 COL6A1P12109 1028 aa14.09□□□□□ -0.15
CTNS-205ENST00000467663 MCM5P33992 734 aa14.09□□□□□ -0.15
CTNS-205ENST00000467663 NOVP48745 357 aa14.09□□□□□ -0.15
CTNS-205ENST00000467663 KCTD2Q14681 263 aa14.09□□□□□ -0.15
CTNS-205ENST00000467663 ADCK5Q3MIX3 580 aa14.09□□□□□ -0.15
CTNS-205ENST00000467663 MFSD6Q6ZSS7 791 aa14.09□□□□□ -0.15
CTNS-205ENST00000467663 GMCL1Q96IK5 515 aa14.09□□□□□ -0.15
CTNS-205ENST00000467663 MAML3Q96JK9 1138 aa14.09□□□□□ -0.15
CTNS-205ENST00000467663 MMP19Q99542 508 aa14.09□□□□□ -0.15
CTNS-205ENST00000467663 SH2B1Q9NRF2 756 aaPredicted RBP14.09□□□□□ -0.15
CTNS-205ENST00000467663 DDX20Q9UHI6 824 aaKnown RBP14.09□□□□□ -0.15
CTNS-205ENST00000467663 COLQQ9Y215 455 aaPredicted RBP14.09□□□□□ -0.15
CTNS-205ENST00000467663 DIS3Q9Y2L1 958 aaKnown RBP14.09□□□□□ -0.15
CTNS-205ENST00000467663 RANBP6O60518 1105 aaKnown RBP14.08□□□□□ -0.16
CTNS-205ENST00000467663 ZBED4O75132 1171 aa14.08□□□□□ -0.16
CTNS-205ENST00000467663 BMP3P12645 472 aa14.08□□□□□ -0.16
CTNS-205ENST00000467663 ZNF792Q3KQV3 632 aa14.08□□□□□ -0.16
CTNS-205ENST00000467663 SNRNP48Q6IEG0 339 aaKnown RBP14.08□□□□□ -0.16
CTNS-205ENST00000467663 KIFC2Q96AC6 838 aa14.08□□□□□ -0.16
CTNS-205ENST00000467663 TMEM87BQ96K49 555 aa14.08□□□□□ -0.16
CTNS-205ENST00000467663 AGXT2Q9BYV1 514 aa14.08□□□□□ -0.16
CTNS-205ENST00000467663 UPF3BQ9BZI7 483 aaKnown RBP14.08□□□□□ -0.16
CTNS-205ENST00000467663 SLC38A10Q9HBR0 1119 aa14.08□□□□□ -0.16
CTNS-205ENST00000467663 LIMCH1Q9UPQ0 1083 aa14.08□□□□□ -0.16
CTNS-205ENST00000467663 PFASO15067 1338 aa14.08□□□□□ -0.16
CTNS-205ENST00000467663 NMT2O60551 498 aa14.07□□□□□ -0.16
CTNS-205ENST00000467663 PLA2G6O60733 806 aa14.07□□□□□ -0.16
CTNS-205ENST00000467663 PGK2P07205 417 aa14.07□□□□□ -0.16
CTNS-205ENST00000467663 FDX1P10109 184 aa14.07□□□□□ -0.16
CTNS-205ENST00000467663 CNGA1P29973 690 aa14.07□□□□□ -0.16
CTNS-205ENST00000467663 OAZ1P54368 228 aa14.07□□□□□ -0.16
CTNS-205ENST00000467663 EXOSC10Q01780 885 aaKnown RBP14.07□□□□□ -0.16
CTNS-205ENST00000467663 CCDC178Q5BJE1 867 aa14.07□□□□□ -0.16
CTNS-205ENST00000467663 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.07□□□□□ -0.16
CTNS-205ENST00000467663 TMTC2Q8N394 836 aa14.07□□□□□ -0.16
CTNS-205ENST00000467663 TCP11L1Q9NUJ3 509 aa14.07□□□□□ -0.16
CTNS-205ENST00000467663 NRBP1Q9UHY1 535 aa14.07□□□□□ -0.16
CTNS-205ENST00000467663 STX8Q9UNK0 236 aa14.07□□□□□ -0.16
CTNS-205ENST00000467663 RIPK3Q9Y572 518 aa14.07□□□□□ -0.16
CTNS-205ENST00000467663 COL11A1P12107 1806 aaPredicted RBP14.06□□□□□ -0.16
CTNS-205ENST00000467663 MYH4Q9Y623 1939 aa14.06□□□□□ -0.16
CTNS-205ENST00000467663 TMEM232C9JQI7 657 aa14.06□□□□□ -0.16
CTNS-205ENST00000467663 SEPT4O43236 478 aa14.06□□□□□ -0.16
CTNS-205ENST00000467663 SLC1A4P43007 532 aa14.06□□□□□ -0.16
CTNS-205ENST00000467663 STAT2P52630 851 aa14.06□□□□□ -0.16
CTNS-205ENST00000467663 HAND2P61296 217 aa14.06□□□□□ -0.16
CTNS-205ENST00000467663 SART3Q15020 963 aaKnown RBP14.06□□□□□ -0.16
CTNS-205ENST00000467663 RCSD1Q6JBY9 416 aa14.06□□□□□ -0.16
CTNS-205ENST00000467663 CHRDL2Q6WN34 429 aa14.06□□□□□ -0.16
CTNS-205ENST00000467663 STOX1Q6ZVD7 989 aa14.06□□□□□ -0.16
CTNS-205ENST00000467663 FAM160B2Q86V87 743 aa14.06□□□□□ -0.16
CTNS-205ENST00000467663 MB21D2Q8IYB1 491 aaPredicted RBP14.06□□□□□ -0.16
CTNS-205ENST00000467663 CPXCR1Q8N123 301 aa14.06□□□□□ -0.16
CTNS-205ENST00000467663 CHURC1Q8WUH1 139 aa14.06□□□□□ -0.16
CTNS-205ENST00000467663 ESR2Q92731 530 aa14.06□□□□□ -0.16
CTNS-205ENST00000467663 INTS4Q96HW7 963 aaKnown RBP14.06□□□□□ -0.16
CTNS-205ENST00000467663 PRO3102Q9H379 93 aa14.06□□□□□ -0.16
CTNS-205ENST00000467663 RAVER2Q9HCJ3 691 aaKnown RBP14.06□□□□□ -0.16
CTNS-205ENST00000467663 CTDP1Q9Y5B0 961 aaPredicted RBP14.06□□□□□ -0.16
CTNS-205ENST00000467663 CEP290O15078 2479 aa14.06□□□□□ -0.16
CTNS-205ENST00000467663 DNAJC25-GNG10A0A024R161 153 aa14.05□□□□□ -0.16
CTNS-205ENST00000467663 HSP90AA1P07900 732 aaKnown RBP14.05□□□□□ -0.16
CTNS-205ENST00000467663 PDIA4P13667 645 aaKnown RBP14.05□□□□□ -0.16
CTNS-205ENST00000467663 AK2P54819 239 aa14.05□□□□□ -0.16
CTNS-205ENST00000467663 FGD1P98174 961 aa14.05□□□□□ -0.16
CTNS-205ENST00000467663 PRAMEF19Q5SWL8 479 aa14.05□□□□□ -0.16
CTNS-205ENST00000467663 MSL3Q8N5Y2 521 aaKnown RBP14.05□□□□□ -0.16
CTNS-205ENST00000467663 CHST13Q8NET6 341 aa14.05□□□□□ -0.16
CTNS-205ENST00000467663 TINF2Q9BSI4 451 aa14.05□□□□□ -0.16
CTNS-205ENST00000467663 TOMM22Q9NS69 142 aa14.05□□□□□ -0.16
CTNS-205ENST00000467663 FBXO40Q9UH90 709 aa14.05□□□□□ -0.16
CTNS-205ENST00000467663 DNM1LO00429 736 aa14.04□□□□□ -0.16
CTNS-205ENST00000467663 TOP1P11387 765 aaKnown RBP14.04□□□□□ -0.16
CTNS-205ENST00000467663 EVCP57679 992 aa14.04□□□□□ -0.16
CTNS-205ENST00000467663 CUL4AQ13619 759 aa14.04□□□□□ -0.16
CTNS-205ENST00000467663 RRP12Q5JTH9 1297 aaKnown RBP14.04□□□□□ -0.16
CTNS-205ENST00000467663 TBC1D10CQ8IV04 446 aa14.04□□□□□ -0.16
CTNS-205ENST00000467663 ARRDC4Q8NCT1 418 aa14.04□□□□□ -0.16
CTNS-205ENST00000467663 DDX11Q96FC9 970 aa14.04□□□□□ -0.16
CTNS-205ENST00000467663 ERICH2A1L162 156 aa14.03□□□□□ -0.16
CTNS-205ENST00000467663 LIFRP42702 1097 aa14.03□□□□□ -0.16
CTNS-205ENST00000467663 RCAN1P53805 252 aa14.03□□□□□ -0.16
CTNS-205ENST00000467663 MAMDC4Q6UXC1 1216 aa14.03□□□□□ -0.16
CTNS-205ENST00000467663 KCTD1Q719H9 257 aa14.03□□□□□ -0.16
CTNS-205ENST00000467663 ZNF467Q7Z7K2 595 aaPredicted RBP14.03□□□□□ -0.16
CTNS-205ENST00000467663 IQCA1Q86XH1 822 aa14.03□□□□□ -0.16
CTNS-205ENST00000467663 C7orf61Q8IZ16 206 aa14.03□□□□□ -0.16
CTNS-205ENST00000467663 DCAF4Q8WV16 495 aa14.03□□□□□ -0.16
CTNS-205ENST00000467663 ZNF274Q96GC6 653 aaPredicted RBP14.03□□□□□ -0.16
CTNS-205ENST00000467663 TMX3Q96JJ7 454 aa14.03□□□□□ -0.16
CTNS-205ENST00000467663 TMEM47Q9BQJ4 181 aa14.03□□□□□ -0.16
CTNS-205ENST00000467663 RBM27Q9P2N5 1060 aaKnown RBP14.03□□□□□ -0.16
CTNS-205ENST00000467663 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.03□□□□□ -0.16
CTNS-205ENST00000467663 ZNF536O15090 1300 aa14.03□□□□□ -0.16
CTNS-205ENST00000467663 ALPK3Q96L96 1907 aa14.02□□□□□ -0.16
CTNS-205ENST00000467663 ZNFX1Q9P2E3 1918 aaKnown RBP14.02□□□□□ -0.16
CTNS-205ENST00000467663 PRC1O43663 620 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms