RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 LCTP09848 1927 aa30.37■■■□□ 2.45
PDCD4-205ENST00000467574 COBLO75128 1261 aa30.36■■■□□ 2.45
PDCD4-205ENST00000467574 IGHA2P01877 340 aa30.36■■■□□ 2.45
PDCD4-205ENST00000467574 HMGCRP04035 888 aa30.36■■■□□ 2.45
PDCD4-205ENST00000467574 FCER1AP12319 257 aa30.36■■■□□ 2.45
PDCD4-205ENST00000467574 EXOSC10Q01780 885 aaKnown RBP30.36■■■□□ 2.45
PDCD4-205ENST00000467574 CCDC174Q6PII3 467 aa30.36■■■□□ 2.45
PDCD4-205ENST00000467574 STAG2Q8N3U4 1231 aa30.36■■■□□ 2.45
PDCD4-205ENST00000467574 LRRC2Q9BYS8 371 aa30.36■■■□□ 2.45
PDCD4-205ENST00000467574 UBA5Q9GZZ9 404 aa30.36■■■□□ 2.45
PDCD4-205ENST00000467574 MAD2L2Q9UI95 211 aa30.36■■■□□ 2.45
PDCD4-205ENST00000467574 WDR19Q8NEZ3 1342 aa30.36■■■□□ 2.45
PDCD4-205ENST00000467574 MKI67P46013 3256 aaKnown RBP30.36■■■□□ 2.45
PDCD4-205ENST00000467574 TAL1P17542 331 aaPredicted RBP30.35■■■□□ 2.45
PDCD4-205ENST00000467574 SOX10P56693 466 aa30.35■■■□□ 2.45
PDCD4-205ENST00000467574 TRIM32Q13049 653 aa30.35■■■□□ 2.45
PDCD4-205ENST00000467574 GRM4Q14833 912 aa30.35■■■□□ 2.45
PDCD4-205ENST00000467574 MMP19Q99542 508 aa30.35■■■□□ 2.45
PDCD4-205ENST00000467574 FLRT1Q9NZU1 646 aa30.35■■■□□ 2.45
PDCD4-205ENST00000467574 PALM3A6NDB9 673 aaPredicted RBP30.34■■■□□ 2.45
PDCD4-205ENST00000467574 ICAM1P05362 532 aa30.34■■■□□ 2.45
PDCD4-205ENST00000467574 LIFRP42702 1097 aa30.34■■■□□ 2.45
PDCD4-205ENST00000467574 MYCP01106 439 aaPredicted RBP30.33■■■□□ 2.45
PDCD4-205ENST00000467574 SLC4A3P48751 1232 aa30.33■■■□□ 2.45
PDCD4-205ENST00000467574 DHX32Q7L7V1 743 aaKnown RBP30.33■■■□□ 2.45
PDCD4-205ENST00000467574 TRMT44Q8IYL2 757 aaKnown RBP30.33■■■□□ 2.45
PDCD4-205ENST00000467574 ZNF654Q8IZM8 581 aa30.33■■■□□ 2.45
PDCD4-205ENST00000467574 CHST13Q8NET6 341 aa30.33■■■□□ 2.45
PDCD4-205ENST00000467574 TCEANC2Q96MN5 208 aa30.33■■■□□ 2.45
PDCD4-205ENST00000467574 BIN2Q9UBW5 565 aaPredicted RBP30.33■■■□□ 2.45
PDCD4-205ENST00000467574 UBXN2AP68543 259 aa30.32■■■□□ 2.44
PDCD4-205ENST00000467574 SLC35G1Q2M3R5 365 aa30.32■■■□□ 2.44
PDCD4-205ENST00000467574 MAP3K21Q5TCX8 1036 aa30.32■■■□□ 2.44
PDCD4-205ENST00000467574 CATIPQ7Z7H3 387 aa30.32■■■□□ 2.44
PDCD4-205ENST00000467574 HOMER2Q9NSB8 354 aa30.32■■■□□ 2.44
PDCD4-205ENST00000467574 RNF146Q9NTX7 359 aa30.32■■■□□ 2.44
PDCD4-205ENST00000467574 CCPG1Q9ULG6 757 aa30.32■■■□□ 2.44
PDCD4-205ENST00000467574 POTEFA5A3E0 1075 aa30.31■■■□□ 2.44
PDCD4-205ENST00000467574 DDAH1O94760 285 aa30.31■■■□□ 2.44
PDCD4-205ENST00000467574 PGK2P07205 417 aa30.31■■■□□ 2.44
PDCD4-205ENST00000467574 CCL5P13501 91 aa30.31■■■□□ 2.44
PDCD4-205ENST00000467574 KCTD2Q14681 263 aa30.31■■■□□ 2.44
PDCD4-205ENST00000467574 TKFCQ3LXA3 575 aa30.31■■■□□ 2.44
PDCD4-205ENST00000467574 DPP9Q86TI2 863 aa30.31■■■□□ 2.44
PDCD4-205ENST00000467574 SGMS1Q86VZ5 419 aa30.31■■■□□ 2.44
PDCD4-205ENST00000467574 ADGRF4Q8IZF3 695 aa30.31■■■□□ 2.44
PDCD4-205ENST00000467574 JAKMIP1Q96N16 626 aaKnown RBP30.31■■■□□ 2.44
PDCD4-205ENST00000467574 MYL10Q9BUA6 226 aa30.31■■■□□ 2.44
PDCD4-205ENST00000467574 UNC93B1Q9H1C4 597 aa30.31■■■□□ 2.44
PDCD4-205ENST00000467574 FBXO40Q9UH90 709 aa30.31■■■□□ 2.44
PDCD4-205ENST00000467574 MCM3APO60318 1980 aa30.31■■■□□ 2.44
PDCD4-205ENST00000467574 DNAJC25-GNG10A0A024R161 153 aa30.3■■■□□ 2.44
PDCD4-205ENST00000467574 ALAS1P13196 640 aa30.3■■■□□ 2.44
PDCD4-205ENST00000467574 CPA1P15085 419 aa30.3■■■□□ 2.44
PDCD4-205ENST00000467574 ACAD9Q9H845 621 aa30.3■■■□□ 2.44
PDCD4-205ENST00000467574 FRMPD3Q5JV73 1810 aa30.29■■■□□ 2.44
PDCD4-205ENST00000467574 KLRF2D3W0D1 207 aa30.29■■■□□ 2.44
PDCD4-205ENST00000467574 HMGB1P09429 215 aaKnown RBP30.29■■■□□ 2.44
PDCD4-205ENST00000467574 CDC37Q16543 378 aaPredicted RBP30.29■■■□□ 2.44
PDCD4-205ENST00000467574 ZNF792Q3KQV3 632 aa30.29■■■□□ 2.44
PDCD4-205ENST00000467574 MUM1L1Q5H9M0 696 aa30.29■■■□□ 2.44
PDCD4-205ENST00000467574 TMTC2Q8N394 836 aa30.29■■■□□ 2.44
PDCD4-205ENST00000467574 TRERF1Q96PN7 1200 aa30.29■■■□□ 2.44
PDCD4-205ENST00000467574 MAP3K14Q99558 947 aa30.29■■■□□ 2.44
PDCD4-205ENST00000467574 JMJD4Q9H9V9 463 aa30.29■■■□□ 2.44
PDCD4-205ENST00000467574 OLFML2BQ68BL8 750 aa30.28■■■□□ 2.44
PDCD4-205ENST00000467574 MTMR8Q96EF0 704 aa30.28■■■□□ 2.44
PDCD4-205ENST00000467574 MAML3Q96JK9 1138 aa30.28■■■□□ 2.44
PDCD4-205ENST00000467574 PRKAR2AP13861 404 aaKnown RBP30.27■■■□□ 2.44
PDCD4-205ENST00000467574 NFXL1Q6ZNB6 911 aa30.27■■■□□ 2.44
PDCD4-205ENST00000467574 A1CFQ9NQ94 594 aaKnown RBP30.27■■■□□ 2.44
PDCD4-205ENST00000467574 PAK6Q9NQU5 681 aaPredicted RBP30.27■■■□□ 2.44
PDCD4-205ENST00000467574 CCDC69A6NI79 296 aa30.26■■■□□ 2.43
PDCD4-205ENST00000467574 CACNB2Q08289 660 aaPredicted RBP30.26■■■□□ 2.43
PDCD4-205ENST00000467574 NUP133Q8WUM0 1156 aa30.26■■■□□ 2.43
PDCD4-205ENST00000467574 FGD4Q96M96 766 aa30.26■■■□□ 2.43
PDCD4-205ENST00000467574 RNF208Q9H0X6 261 aa30.26■■■□□ 2.43
PDCD4-205ENST00000467574 SLC5A4Q9NY91 659 aa30.26■■■□□ 2.43
PDCD4-205ENST00000467574 DIS3Q9Y2L1 958 aaKnown RBP30.26■■■□□ 2.43
PDCD4-205ENST00000467574 CYTH3O43739 400 aa30.25■■■□□ 2.43
PDCD4-205ENST00000467574 QRICH1Q2TAL8 776 aa30.25■■■□□ 2.43
PDCD4-205ENST00000467574 BLOC1S2Q6QNY1 142 aa30.25■■■□□ 2.43
PDCD4-205ENST00000467574 ANKRD35Q8N283 1001 aa30.25■■■□□ 2.43
PDCD4-205ENST00000467574 CLEC4DQ8WXI8 215 aa30.25■■■□□ 2.43
PDCD4-205ENST00000467574 TMEM106CQ9BVX2 250 aa30.25■■■□□ 2.43
PDCD4-205ENST00000467574 RIOX1Q9H6W3 641 aa30.25■■■□□ 2.43
PDCD4-205ENST00000467574 TNRC18O15417 2968 aaPredicted RBP30.25■■■□□ 2.43
PDCD4-205ENST00000467574 RPTORQ8N122 1335 aa30.24■■■□□ 2.43
PDCD4-205ENST00000467574 NFIBO00712 420 aa30.24■■■□□ 2.43
PDCD4-205ENST00000467574 SEC24BO95487 1268 aa30.24■■■□□ 2.43
PDCD4-205ENST00000467574 RXRAP19793 462 aa30.24■■■□□ 2.43
PDCD4-205ENST00000467574 RPS6KB1P23443 525 aa30.24■■■□□ 2.43
PDCD4-205ENST00000467574 CYP2C19P33261 490 aa30.24■■■□□ 2.43
PDCD4-205ENST00000467574 C8orf34Q49A92 452 aa30.24■■■□□ 2.43
PDCD4-205ENST00000467574 APOA5Q6Q788 366 aa30.24■■■□□ 2.43
PDCD4-205ENST00000467574 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.24■■■□□ 2.434e-6■■■■□ 22.2
PDCD4-205ENST00000467574 PNMA2Q9UL42 364 aa30.24■■■□□ 2.43
PDCD4-205ENST00000467574 BRPF3Q9ULD4 1205 aa30.24■■■□□ 2.43
PDCD4-205ENST00000467574 SLC12A7Q9Y666 1083 aa30.24■■■□□ 2.43
PDCD4-205ENST00000467574 LRRC37A2A6NM11 1700 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms