RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 XRCC5P13010 732 aaKnown RBP12.89□□□□□ -0.35
MSH5-212ENST00000467319 CASTP20810 708 aaKnown RBP12.89□□□□□ -0.35
MSH5-212ENST00000467319 PSMA5P28066 241 aa12.89□□□□□ -0.35
MSH5-212ENST00000467319 RCAN1P53805 252 aa12.89□□□□□ -0.35
MSH5-212ENST00000467319 SNAP25P60880 206 aa12.89□□□□□ -0.35
MSH5-212ENST00000467319 MAP2K5Q13163 448 aa12.89□□□□□ -0.35
MSH5-212ENST00000467319 NCAPG2Q86XI2 1143 aa12.89□□□□□ -0.35
MSH5-212ENST00000467319 SLAIN1Q8ND83 568 aa12.89□□□□□ -0.35
MSH5-212ENST00000467319 PXYLP1Q8TE99 480 aa12.89□□□□□ -0.35
MSH5-212ENST00000467319 NUDT12Q9BQG2 462 aa12.89□□□□□ -0.35
MSH5-212ENST00000467319 MYL10Q9BUA6 226 aa12.89□□□□□ -0.35
MSH5-212ENST00000467319 BRPF3Q9ULD4 1205 aa12.89□□□□□ -0.35
MSH5-212ENST00000467319 CCDC69A6NI79 296 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 CYTH3O43739 400 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 STRNO43815 780 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 TAL1P17542 331 aaPredicted RBP12.88□□□□□ -0.35
MSH5-212ENST00000467319 ADORA2AP29274 412 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 RGS2P41220 211 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 TKFCQ3LXA3 575 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 RUFY3Q7L099 469 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 NBPF11Q86T75 865 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 CCAR1Q8IX12 1150 aaKnown RBP12.88□□□□□ -0.35
MSH5-212ENST00000467319 ADGRF4Q8IZF3 695 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 CPXCR1Q8N123 301 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 CHST13Q8NET6 341 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 RAET1EQ8TD07 263 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 ZNF333Q96JL9 665 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 AGBL1Q96MI9 1066 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 SPZ1Q9BXG8 430 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 UBA5Q9GZZ9 404 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 JMJD4Q9H9V9 463 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 FBXO40Q9UH90 709 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 SLC12A7Q9Y666 1083 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 IVNS1ABPQ9Y6Y0 642 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 PLXNA1Q9UIW2 1896 aa12.88□□□□□ -0.35
MSH5-212ENST00000467319 DNAJC25-GNG10A0A024R161 153 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 ADCY3O60266 1144 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 CALM1P0DP23 149 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 CALM2P0DP24 149 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 CALM3P0DP25 149 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 FCER1AP12319 257 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 ELNP15502 786 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 RXRAP19793 462 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 GRK4P32298 578 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 KIF5BP33176 963 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 EVCP57679 992 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 CDC37Q16543 378 aaPredicted RBP12.87□□□□□ -0.35
MSH5-212ENST00000467319 SLC9C1Q4G0N8 1177 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 WDR78Q5VTH9 848 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 CCDC174Q6PII3 467 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 NFXL1Q6ZNB6 911 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 MICU3Q86XE3 530 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 TRIB2Q92519 343 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 UPF3BQ9BZI7 483 aaKnown RBP12.87□□□□□ -0.35
MSH5-212ENST00000467319 RIOX1Q9H6W3 641 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 RNF146Q9NTX7 359 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 PNMA2Q9UL42 364 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 CCPG1Q9ULG6 757 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 CTDP1Q9Y5B0 961 aaPredicted RBP12.87□□□□□ -0.35
MSH5-212ENST00000467319 SMCHD1A6NHR9 2005 aa12.87□□□□□ -0.35
MSH5-212ENST00000467319 MYH6P13533 1939 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 KLF18A0A0U1RQI7 1052 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 PPP1R11O60927 126 aaPredicted RBP12.86□□□□□ -0.35
MSH5-212ENST00000467319 COBLO75128 1261 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 PLEKHA8P1O95397 391 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 HMGCRP04035 888 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 SMARCA1P28370 1054 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 FUT2Q10981 343 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 TOB2Q14106 344 aaPredicted RBP12.86□□□□□ -0.35
MSH5-212ENST00000467319 QRICH1Q2TAL8 776 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 MUM1L1Q5H9M0 696 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 MAP3K21Q5TCX8 1036 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 Q6ZUG5 572 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 TMTC3Q6ZXV5 915 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 CTCFLQ8NI51 663 aaPredicted RBP12.86□□□□□ -0.35
MSH5-212ENST00000467319 SH3TC2Q8TF17 1288 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 NUP133Q8WUM0 1156 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 CLEC4DQ8WXI8 215 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 BRF1Q92994 677 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 FGD4Q96M96 766 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 MMP19Q99542 508 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 ACAD9Q9H845 621 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 CWC22Q9HCG8 908 aaKnown RBP12.86□□□□□ -0.35
MSH5-212ENST00000467319 CYP46A1Q9Y6A2 500 aa12.86□□□□□ -0.35
MSH5-212ENST00000467319 GOLGA8BA8MQT2 603 aa12.85□□□□□ -0.35
MSH5-212ENST00000467319 ZBTB43O43298 467 aa12.85□□□□□ -0.35
MSH5-212ENST00000467319 INHAP05111 366 aa12.85□□□□□ -0.35
MSH5-212ENST00000467319 KCTD2Q14681 263 aa12.85□□□□□ -0.35
MSH5-212ENST00000467319 CCL14Q16627 93 aa12.85□□□□□ -0.35
MSH5-212ENST00000467319 ZNF792Q3KQV3 632 aa12.85□□□□□ -0.35
MSH5-212ENST00000467319 OLFML2BQ68BL8 750 aa12.85□□□□□ -0.35
MSH5-212ENST00000467319 RAB11FIP4Q86YS3 637 aa12.85□□□□□ -0.35
MSH5-212ENST00000467319 TRMT44Q8IYL2 757 aaKnown RBP12.85□□□□□ -0.35
MSH5-212ENST00000467319 FANCBQ8NB91 859 aa12.85□□□□□ -0.35
MSH5-212ENST00000467319 NPLOC4Q8TAT6 608 aa12.85□□□□□ -0.35
MSH5-212ENST00000467319 LZTS2Q9BRK4 669 aa12.85□□□□□ -0.35
MSH5-212ENST00000467319 A1CFQ9NQ94 594 aaKnown RBP12.85□□□□□ -0.35
MSH5-212ENST00000467319 HOMER2Q9NSB8 354 aa12.85□□□□□ -0.35
MSH5-212ENST00000467319 FAM217BQ9NTX9 383 aaPredicted RBP12.85□□□□□ -0.35
MSH5-212ENST00000467319 FLRT1Q9NZU1 646 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms