RNA–Protein interactions for RNA: ENST00000466519.5

SEC22A-202, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22A, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-202ENST00000466519 STXBP5LQ9Y2K9 1186 aa7.58□□□□□ -1.2
SEC22A-202ENST00000466519 SLC45A1Q9Y2W3 748 aa7.58□□□□□ -1.2
SEC22A-202ENST00000466519 DAGLAQ9Y4D2 1042 aa7.58□□□□□ -1.2
SEC22A-202ENST00000466519 TRIOBPQ9H2D6 2365 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 PHF20L1A8MW92 1017 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 FGFR2P21802 821 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 PSMA6P60900 246 aaKnown RBP7.57□□□□□ -1.2
SEC22A-202ENST00000466519 KRT76Q01546 638 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 DPYDQ12882 1025 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 PUM3Q15397 648 aaKnown RBP7.57□□□□□ -1.2
SEC22A-202ENST00000466519 TEAD4Q15561 434 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 LRIT3Q3SXY7 679 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 RABL6Q3YEC7 729 aaPredicted RBP7.57□□□□□ -1.2
SEC22A-202ENST00000466519 ANKMY2Q8IV38 441 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 WDR63Q8IWG1 891 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 SCYL3Q8IZE3 742 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 ANKRD44Q8N8A2 993 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 ZSCAN1Q8NBB4 408 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 TSEN2Q8NCE0 465 aaKnown RBP7.57□□□□□ -1.2
SEC22A-202ENST00000466519 KLHDC4Q8TBB5 520 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 GTPBP3Q969Y2 492 aaKnown RBP7.57□□□□□ -1.2
SEC22A-202ENST00000466519 COA7Q96BR5 231 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 CNTNAP3BQ96NU0 1288 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 CNTNAP3Q9BZ76 1288 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.57□□□□□ -1.2
SEC22A-202ENST00000466519 RUBCNLQ9H714 662 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 MTMR10Q9NXD2 777 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 PHF24Q9UPV7 400 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 AFG3L2Q9Y4W6 797 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 GPC6Q9Y625 555 aaPredicted RBP7.57□□□□□ -1.2
SEC22A-202ENST00000466519 COL6A3P12111 3177 aa7.57□□□□□ -1.2
SEC22A-202ENST00000466519 UTYO14607 1347 aa7.56□□□□□ -1.2
SEC22A-202ENST00000466519 KIF16BQ96L93 1317 aa7.56□□□□□ -1.2
SEC22A-202ENST00000466519 FAM181BA6NEQ2 426 aa7.56□□□□□ -1.2
SEC22A-202ENST00000466519 SYN1P17600 705 aa7.56□□□□□ -1.2
SEC22A-202ENST00000466519 PRDX5P30044 214 aa7.56□□□□□ -1.2
SEC22A-202ENST00000466519 MAGEA10P43363 369 aaPredicted RBP7.56□□□□□ -1.2
SEC22A-202ENST00000466519 CCDC184Q52MB2 194 aa7.56□□□□□ -1.2
SEC22A-202ENST00000466519 RNFT1Q5M7Z0 435 aa7.56□□□□□ -1.2
SEC22A-202ENST00000466519 FIGNL1Q6PIW4 674 aa7.56□□□□□ -1.2
SEC22A-202ENST00000466519 NLRP8Q86W28 1048 aa7.56□□□□□ -1.2
SEC22A-202ENST00000466519 ANKRD13CQ8N6S4 541 aa7.56□□□□□ -1.2
SEC22A-202ENST00000466519 TSPAN10Q9H1Z9 355 aaPredicted RBP7.56□□□□□ -1.2
SEC22A-202ENST00000466519 STK17AQ9UEE5 414 aa7.56□□□□□ -1.2
SEC22A-202ENST00000466519 ZNF232Q9UNY5 417 aa7.56□□□□□ -1.2
SEC22A-202ENST00000466519 LRRFIP2Q9Y608 721 aaKnown RBP7.56□□□□□ -1.2
SEC22A-202ENST00000466519 LAMA3Q16787 3333 aa7.55□□□□□ -1.2
SEC22A-202ENST00000466519 SERTM1A2A2V5 107 aa7.55□□□□□ -1.2
SEC22A-202ENST00000466519 TRIM75PA6NK02 468 aa7.55□□□□□ -1.2
SEC22A-202ENST00000466519 CTNND1O60716 968 aaKnown RBP7.55□□□□□ -1.2
SEC22A-202ENST00000466519 ENTPD3O75355 529 aa7.55□□□□□ -1.2
SEC22A-202ENST00000466519 LDHBP07195 334 aaKnown RBP7.55□□□□□ -1.2
SEC22A-202ENST00000466519 SLURP2P0DP57 97 aa7.55□□□□□ -1.2
SEC22A-202ENST00000466519 SLC5A1P13866 664 aa7.55□□□□□ -1.2
SEC22A-202ENST00000466519 RFX1P22670 979 aa7.55□□□□□ -1.2
SEC22A-202ENST00000466519 NOS2P35228 1153 aa7.55□□□□□ -1.2
SEC22A-202ENST00000466519 RGS3P49796 1198 aa7.55□□□□□ -1.2
SEC22A-202ENST00000466519 MAP3K10Q02779 954 aa7.55□□□□□ -1.2
SEC22A-202ENST00000466519 GAS6Q14393 721 aa7.55□□□□□ -1.2
SEC22A-202ENST00000466519 ZSCAN29Q8IWY8 852 aaPredicted RBP7.55□□□□□ -1.2
SEC22A-202ENST00000466519 TDHQ8IZJ6 230 aa7.55□□□□□ -1.2
SEC22A-202ENST00000466519 ZDHHC1Q8WTX9 485 aa7.55□□□□□ -1.2
SEC22A-202ENST00000466519 LPIN2Q92539 896 aa7.55□□□□□ -1.2
SEC22A-202ENST00000466519 IDI2Q9BXS1 227 aa7.55□□□□□ -1.2
SEC22A-202ENST00000466519 UBE2OQ9C0C9 1292 aaKnown RBP7.55□□□□□ -1.2
SEC22A-202ENST00000466519 C11orf49Q9H6J7 331 aa7.55□□□□□ -1.2
SEC22A-202ENST00000466519 AGTPBP1Q9UPW5 1226 aa7.55□□□□□ -1.2
SEC22A-202ENST00000466519 RPTORQ8N122 1335 aa7.54□□□□□ -1.2
SEC22A-202ENST00000466519 LAMB1P07942 1786 aa7.54□□□□□ -1.2
SEC22A-202ENST00000466519 DDTLA6NHG4 134 aaPredicted RBP7.54□□□□□ -1.2
SEC22A-202ENST00000466519 EYA2O00167 538 aa7.54□□□□□ -1.2
SEC22A-202ENST00000466519 HMGCRP04035 888 aa7.54□□□□□ -1.2
SEC22A-202ENST00000466519 THBS1P07996 1170 aa7.54□□□□□ -1.2
SEC22A-202ENST00000466519 FAM110CQ1W6H9 321 aa7.54□□□□□ -1.2
SEC22A-202ENST00000466519 ARSJQ5FYB0 599 aaPredicted RBP7.54□□□□□ -1.2
SEC22A-202ENST00000466519 TBCELQ5QJ74 424 aa7.54□□□□□ -1.2
SEC22A-202ENST00000466519 TREML2Q5T2D2 321 aa7.54□□□□□ -1.2
SEC22A-202ENST00000466519 CCDC84Q86UT8 332 aaPredicted RBP7.54□□□□□ -1.2
SEC22A-202ENST00000466519 STAG2Q8N3U4 1231 aa7.54□□□□□ -1.2
SEC22A-202ENST00000466519 GNL3LQ9NVN8 582 aaKnown RBP7.54□□□□□ -1.2
SEC22A-202ENST00000466519 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.54□□□□□ -1.2
SEC22A-202ENST00000466519 GJD2Q9UKL4 321 aa7.54□□□□□ -1.2
SEC22A-202ENST00000466519 ATRNL1Q5VV63 1379 aa7.54□□□□□ -1.2
SEC22A-202ENST00000466519 SPEF2Q9C093 1822 aa7.53□□□□□ -1.2
SEC22A-202ENST00000466519 EML1O00423 815 aa7.53□□□□□ -1.2
SEC22A-202ENST00000466519 GCLCP48506 637 aaPredicted RBP7.53□□□□□ -1.2
SEC22A-202ENST00000466519 SRSF11Q05519 484 aaKnown RBP7.53□□□□□ -1.2
SEC22A-202ENST00000466519 SPP2Q13103 211 aa7.53□□□□□ -1.2
SEC22A-202ENST00000466519 ELOAQ14241 798 aaKnown RBP7.53□□□□□ -1.2
SEC22A-202ENST00000466519 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.53□□□□□ -1.2
SEC22A-202ENST00000466519 FAM200AQ8TCP9 573 aa7.53□□□□□ -1.2
SEC22A-202ENST00000466519 HINFPQ9BQA5 517 aa7.53□□□□□ -1.2
SEC22A-202ENST00000466519 OGDHLQ9ULD0 1010 aa7.53□□□□□ -1.2
SEC22A-202ENST00000466519 DENND2AQ9ULE3 1009 aa7.53□□□□□ -1.2
SEC22A-202ENST00000466519 ATXN7L1Q9ULK2 861 aaPredicted RBP7.53□□□□□ -1.2
SEC22A-202ENST00000466519 OTOFQ9HC10 1997 aa7.53□□□□□ -1.2
SEC22A-202ENST00000466519 SALL1Q9NSC2 1324 aa7.52□□□□□ -1.2
SEC22A-202ENST00000466519 ZSWIM8A7E2V4 1837 aa7.52□□□□□ -1.2
SEC22A-202ENST00000466519 CEP290O15078 2479 aa7.52□□□□□ -1.21
SEC22A-202ENST00000466519 A0A1W2PNR3 127 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms