RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 ADORA2AP29274 412 aa12.51□□□□□ -0.41
NPHP3-203ENST00000465756 SIPA1L1O43166 1804 aa12.51□□□□□ -0.41
NPHP3-203ENST00000465756 SMARCA1P28370 1054 aa12.51□□□□□ -0.41
NPHP3-203ENST00000465756 RCAN1P53805 252 aa12.51□□□□□ -0.41
NPHP3-203ENST00000465756 KCTD1Q719H9 257 aa12.51□□□□□ -0.41
NPHP3-203ENST00000465756 DHX32Q7L7V1 743 aaKnown RBP12.51□□□□□ -0.41
NPHP3-203ENST00000465756 ZNF467Q7Z7K2 595 aaPredicted RBP12.51□□□□□ -0.41
NPHP3-203ENST00000465756 TRERF1Q96PN7 1200 aa12.51□□□□□ -0.41
NPHP3-203ENST00000465756 NUP88Q99567 741 aaPredicted RBP12.51□□□□□ -0.41
NPHP3-203ENST00000465756 NEDD4P46934 1319 aa12.51□□□□□ -0.41
NPHP3-203ENST00000465756 FARP2O94887 1054 aaPredicted RBP12.5□□□□□ -0.41
NPHP3-203ENST00000465756 ZSWIM5Q9P217 1185 aa12.5□□□□□ -0.41
NPHP3-203ENST00000465756 CYP46A1Q9Y6A2 500 aa12.5□□□□□ -0.41
NPHP3-203ENST00000465756 PDHBP11177 359 aa12.5□□□□□ -0.41
NPHP3-203ENST00000465756 LIFRP42702 1097 aa12.5□□□□□ -0.41
NPHP3-203ENST00000465756 NECAB2Q7Z6G3 386 aa12.5□□□□□ -0.41
NPHP3-203ENST00000465756 ADAMTS5Q9UNA0 930 aa12.5□□□□□ -0.41
NPHP3-203ENST00000465756 hCG_1984214I3L0E3 225 aa12.5□□□□□ -0.41
NPHP3-203ENST00000465756 CYP21A2P08686 494 aa12.5□□□□□ -0.41
NPHP3-203ENST00000465756 NOL8Q76FK4 1167 aaKnown RBP12.5□□□□□ -0.41
NPHP3-203ENST00000465756 ZNF713Q8N859 430 aaPredicted RBP12.5□□□□□ -0.41
NPHP3-203ENST00000465756 ZKSCAN3Q9BRR0 538 aa12.5□□□□□ -0.41
NPHP3-203ENST00000465756 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.5□□□□□ -0.41
NPHP3-203ENST00000465756 ARHGAP39Q9C0H5 1083 aa12.5□□□□□ -0.41
NPHP3-203ENST00000465756 LSG1Q9H089 658 aaKnown RBP12.5□□□□□ -0.41
NPHP3-203ENST00000465756 AP5M1Q9H0R1 490 aa12.5□□□□□ -0.41
NPHP3-203ENST00000465756 BTBD7Q9P203 1132 aa12.5□□□□□ -0.41
NPHP3-203ENST00000465756 FAM184BQ9ULE4 1060 aa12.5□□□□□ -0.41
NPHP3-203ENST00000465756 PTPRFP10586 1907 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 RARBP10826 455 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
NPHP3-203ENST00000465756 SOX10P56693 466 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 MORN1Q5T089 497 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 FBXO28Q9NVF7 368 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 PHIPQ8WWQ0 1821 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 PTPDC1A2A3K4 754 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 GRM4Q14833 912 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 SH3TC2Q8TF17 1288 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 SEZ6LQ9BYH1 1024 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 TCEAL9Q9UHQ7 104 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 FRMPD2Q68DX3 1309 aaPredicted RBP12.49□□□□□ -0.41
NPHP3-203ENST00000465756 KLRF2D3W0D1 207 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 CPLX1O14810 134 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 CDKL5O76039 1030 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 PTH1RQ03431 593 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 TMEM132BQ14DG7 1078 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 SHROOM1Q2M3G4 852 aaPredicted RBP12.49□□□□□ -0.41
NPHP3-203ENST00000465756 TRIM22Q8IYM9 498 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 PORCNQ9H237 461 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 PRKAG2Q9UGJ0 569 aa12.49□□□□□ -0.41
NPHP3-203ENST00000465756 ZBTB43O43298 467 aa12.48□□□□□ -0.41
NPHP3-203ENST00000465756 XBP1P17861 261 aa12.48□□□□□ -0.41
NPHP3-203ENST00000465756 PDE4DQ08499 809 aa12.48□□□□□ -0.41
NPHP3-203ENST00000465756 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.48□□□□□ -0.41
NPHP3-203ENST00000465756 RNF180Q86T96 592 aa12.48□□□□□ -0.41
NPHP3-203ENST00000465756 ENAHQ8N8S7 591 aaPredicted RBP12.48□□□□□ -0.41
NPHP3-203ENST00000465756 RANBP17Q9H2T7 1088 aaKnown RBP12.48□□□□□ -0.41
NPHP3-203ENST00000465756 GABRQQ9UN88 632 aa12.48□□□□□ -0.41
NPHP3-203ENST00000465756 NOVP48745 357 aa12.48□□□□□ -0.41
NPHP3-203ENST00000465756 CDC37Q16543 378 aaPredicted RBP12.48□□□□□ -0.41
NPHP3-203ENST00000465756 SIAH1Q8IUQ4 282 aa12.48□□□□□ -0.41
NPHP3-203ENST00000465756 ZNF654Q8IZM8 581 aa12.48□□□□□ -0.41
NPHP3-203ENST00000465756 JAKMIP1Q96N16 626 aaKnown RBP12.48□□□□□ -0.41
NPHP3-203ENST00000465756 TXNRD2Q9NNW7 524 aa12.48□□□□□ -0.41
NPHP3-203ENST00000465756 HOMER2Q9NSB8 354 aa12.48□□□□□ -0.41
NPHP3-203ENST00000465756 SYNGAP1Q96PV0 1343 aa12.48□□□□□ -0.41
NPHP3-203ENST00000465756 AKR1A1P14550 325 aa12.48□□□□□ -0.41
NPHP3-203ENST00000465756 ANAPC15P60006 121 aa12.48□□□□□ -0.41
NPHP3-203ENST00000465756 RNF207Q6ZRF8 634 aa12.48□□□□□ -0.41
NPHP3-203ENST00000465756 IL17RBQ9NRM6 502 aa12.48□□□□□ -0.41
NPHP3-203ENST00000465756 ZHX1Q9UKY1 873 aaPredicted RBP12.48□□□□□ -0.41
NPHP3-203ENST00000465756 GOLGA8AA7E2F4 631 aa12.47□□□□□ -0.41
NPHP3-203ENST00000465756 GOLGA8BA8MQT2 603 aa12.47□□□□□ -0.41
NPHP3-203ENST00000465756 ELNP15502 786 aa12.47□□□□□ -0.41
NPHP3-203ENST00000465756 RTN1Q16799 776 aa12.47□□□□□ -0.41
NPHP3-203ENST00000465756 RGS22Q8NE09 1264 aa12.47□□□□□ -0.41
NPHP3-203ENST00000465756 ABHD16BQ9H3Z7 469 aa12.47□□□□□ -0.41
NPHP3-203ENST00000465756 VAT1LQ9HCJ6 419 aa12.47□□□□□ -0.41
NPHP3-203ENST00000465756 SGPL1O95470 568 aa12.47□□□□□ -0.41
NPHP3-203ENST00000465756 TSGA10IPQ3SY00 556 aa12.47□□□□□ -0.41
NPHP3-203ENST00000465756 NBPF3Q9H094 633 aa12.47□□□□□ -0.41
NPHP3-203ENST00000465756 U2AF1L4Q8WU68 220 aaKnown RBP12.47□□□□□ -0.41
NPHP3-203ENST00000465756 DEFB118Q96PH6 123 aa12.47□□□□□ -0.41
NPHP3-203ENST00000465756 TINF2Q9BSI4 451 aa12.47□□□□□ -0.41
NPHP3-203ENST00000465756 CNMDO75829 334 aa12.46□□□□□ -0.41
NPHP3-203ENST00000465756 MYCP01106 439 aaPredicted RBP12.46□□□□□ -0.41
NPHP3-203ENST00000465756 GJA8P48165 433 aa12.46□□□□□ -0.41
NPHP3-203ENST00000465756 Q3C1V9 767 aa12.46□□□□□ -0.41
NPHP3-203ENST00000465756 KCNV1Q6PIU1 500 aa12.46□□□□□ -0.41
NPHP3-203ENST00000465756 PCSK9Q8NBP7 692 aaKnown RBP12.46□□□□□ -0.41
NPHP3-203ENST00000465756 VTA1Q9NP79 307 aa12.46□□□□□ -0.41
NPHP3-203ENST00000465756 GJD2Q9UKL4 321 aa12.46□□□□□ -0.41
NPHP3-203ENST00000465756 ZNF214Q9UL59 606 aaPredicted RBP12.46□□□□□ -0.41
NPHP3-203ENST00000465756 KIF3AQ9Y496 699 aa12.46□□□□□ -0.41
NPHP3-203ENST00000465756 MYH4Q9Y623 1939 aa12.46□□□□□ -0.41
NPHP3-203ENST00000465756 NKRFO15226 690 aaKnown RBP eCLIP12.46□□□□□ -0.41
NPHP3-203ENST00000465756 MB21D2Q8IYB1 491 aaPredicted RBP12.46□□□□□ -0.41
NPHP3-203ENST00000465756 DNERQ8NFT8 737 aa12.46□□□□□ -0.41
NPHP3-203ENST00000465756 GPHNQ9NQX3 736 aaPredicted RBP12.46□□□□□ -0.41
NPHP3-203ENST00000465756 ZBTB5O15062 677 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms