RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 ORC3Q9UBD5 711 aaPredicted RBP10.24□□□□□ -0.77
UBA3-208ENST00000465627 NAP1L2Q9ULW6 460 aaPredicted RBP10.24□□□□□ -0.77
UBA3-208ENST00000465627 SYNPO2Q9UMS6 1093 aa10.24□□□□□ -0.77
UBA3-208ENST00000465627 STX8Q9UNK0 236 aa10.24□□□□□ -0.77
UBA3-208ENST00000465627 PPP2R3BQ9Y5P8 575 aa10.24□□□□□ -0.77
UBA3-208ENST00000465627 BDP1A6H8Y1 2624 aa10.23□□□□□ -0.77
UBA3-208ENST00000465627 A0A1W2PRG0 241 aa10.23□□□□□ -0.77
UBA3-208ENST00000465627 CPLX1O14810 134 aa10.23□□□□□ -0.77
UBA3-208ENST00000465627 PRPF3O43395 683 aaKnown RBP10.23□□□□□ -0.77
UBA3-208ENST00000465627 PPFIA3O75145 1194 aa10.23□□□□□ -0.77
UBA3-208ENST00000465627 GDF11O95390 407 aa10.23□□□□□ -0.77
UBA3-208ENST00000465627 BAG4O95429 457 aaKnown RBP10.23□□□□□ -0.77
UBA3-208ENST00000465627 GH2P01242 217 aa10.23□□□□□ -0.77
UBA3-208ENST00000465627 EEF2P13639 858 aaKnown RBP10.23□□□□□ -0.77
UBA3-208ENST00000465627 SMARCA1P28370 1054 aa10.23□□□□□ -0.77
UBA3-208ENST00000465627 CAP2P40123 477 aa10.23□□□□□ -0.77
UBA3-208ENST00000465627 RESTQ13127 1097 aa10.23□□□□□ -0.77
UBA3-208ENST00000465627 ABCB5Q2M3G0 1257 aa10.23□□□□□ -0.77
UBA3-208ENST00000465627 NBPF12Q5TAG4 269 aaPredicted RBP10.23□□□□□ -0.77
UBA3-208ENST00000465627 RASAL3Q86YV0 1011 aa10.23□□□□□ -0.77
UBA3-208ENST00000465627 CMTR1Q8N1G2 835 aaKnown RBP10.23□□□□□ -0.77
UBA3-208ENST00000465627 NUP133Q8WUM0 1156 aa10.23□□□□□ -0.77
UBA3-208ENST00000465627 CHAMP1Q96JM3 812 aa10.23□□□□□ -0.77
UBA3-208ENST00000465627 GJB4Q9NTQ9 266 aa10.23□□□□□ -0.77
UBA3-208ENST00000465627 ZBTB21Q9ULJ3 1066 aa10.23□□□□□ -0.77
UBA3-208ENST00000465627 BAZ2BQ9UIF8 2168 aaKnown RBP10.22□□□□□ -0.77
UBA3-208ENST00000465627 USP17L5A8MUK1 530 aa10.22□□□□□ -0.77
UBA3-208ENST00000465627 MCM4P33991 863 aa10.22□□□□□ -0.77
UBA3-208ENST00000465627 NPY5RQ15761 445 aa10.22□□□□□ -0.77
UBA3-208ENST00000465627 PPP4R3BQ5MIZ7 849 aa10.22□□□□□ -0.77
UBA3-208ENST00000465627 CPLX2Q6PUV4 134 aaKnown RBP10.22□□□□□ -0.77
UBA3-208ENST00000465627 MIGA2Q7L4E1 593 aa10.22□□□□□ -0.77
UBA3-208ENST00000465627 CTCFLQ8NI51 663 aaPredicted RBP10.22□□□□□ -0.77
UBA3-208ENST00000465627 SPZ1Q9BXG8 430 aa10.22□□□□□ -0.77
UBA3-208ENST00000465627 GINM1Q9NU53 330 aa10.22□□□□□ -0.77
UBA3-208ENST00000465627 HCSTQ9UBK5 93 aa10.22□□□□□ -0.77
UBA3-208ENST00000465627 CLIP2Q9UDT6 1046 aa10.22□□□□□ -0.77
UBA3-208ENST00000465627 OTOFQ9HC10 1997 aa10.22□□□□□ -0.77
UBA3-208ENST00000465627 CACNA1GO43497 2377 aa10.21□□□□□ -0.77
UBA3-208ENST00000465627 A0A1W2PPC1 479 aa10.21□□□□□ -0.78
UBA3-208ENST00000465627 DEXIO95424 95 aa10.21□□□□□ -0.78
UBA3-208ENST00000465627 KIF5BP33176 963 aa10.21□□□□□ -0.78
UBA3-208ENST00000465627 GNAQP50148 359 aa10.21□□□□□ -0.78
UBA3-208ENST00000465627 SSRP1Q08945 709 aaKnown RBP10.21□□□□□ -0.78
UBA3-208ENST00000465627 ZNF543Q08ER8 600 aa10.21□□□□□ -0.78
UBA3-208ENST00000465627 USP17L2Q6R6M4 530 aa10.21□□□□□ -0.78
UBA3-208ENST00000465627 LRRC47Q8N1G4 583 aaKnown RBP10.21□□□□□ -0.78
UBA3-208ENST00000465627 GMCL1P1Q8NEA9 526 aa10.21□□□□□ -0.78
UBA3-208ENST00000465627 ZC3H15Q8WU90 426 aaKnown RBP10.21□□□□□ -0.78
UBA3-208ENST00000465627 MTMR8Q96EF0 704 aa10.21□□□□□ -0.78
UBA3-208ENST00000465627 SLC26A6Q9BXS9 759 aa10.21□□□□□ -0.78
UBA3-208ENST00000465627 RIOX1Q9H6W3 641 aa10.21□□□□□ -0.78
UBA3-208ENST00000465627 KIF3AQ9Y496 699 aa10.21□□□□□ -0.78
UBA3-208ENST00000465627 NCOR1O75376 2440 aa10.21□□□□□ -0.78
UBA3-208ENST00000465627 KLRF2D3W0D1 207 aa10.2□□□□□ -0.78
UBA3-208ENST00000465627 TK2O00142 265 aa10.2□□□□□ -0.78
UBA3-208ENST00000465627 MPHOSPH10O00566 681 aaKnown RBP10.2□□□□□ -0.78
UBA3-208ENST00000465627 MYCP01106 439 aaPredicted RBP10.2□□□□□ -0.78
UBA3-208ENST00000465627 ICA1Q05084 483 aa10.2□□□□□ -0.78
UBA3-208ENST00000465627 ASPRV1Q53RT3 343 aa10.2□□□□□ -0.78
UBA3-208ENST00000465627 NOM1Q5C9Z4 860 aaKnown RBP10.2□□□□□ -0.78
UBA3-208ENST00000465627 KIAA1755Q5JYT7 1200 aa10.2□□□□□ -0.78
UBA3-208ENST00000465627 OTUD7BQ6GQQ9 843 aa10.2□□□□□ -0.78
UBA3-208ENST00000465627 C2orf69Q8N8R5 385 aa10.2□□□□□ -0.78
UBA3-208ENST00000465627 FAM184AQ8NB25 1140 aa10.2□□□□□ -0.78
UBA3-208ENST00000465627 TMEM87AQ8NBN3 555 aa10.2□□□□□ -0.78
UBA3-208ENST00000465627 ACER1Q8TDN7 264 aa10.2□□□□□ -0.78
UBA3-208ENST00000465627 GMCL1Q96IK5 515 aa10.2□□□□□ -0.78
UBA3-208ENST00000465627 LZTS2Q9BRK4 669 aa10.2□□□□□ -0.78
UBA3-208ENST00000465627 ALG1Q9BT22 464 aa10.2□□□□□ -0.78
UBA3-208ENST00000465627 TMX2Q9Y320 296 aa10.2□□□□□ -0.78
UBA3-208ENST00000465627 V9GY48 417 aaPredicted RBP10.2□□□□□ -0.78
UBA3-208ENST00000465627 RPTORQ8N122 1335 aa10.2□□□□□ -0.78
UBA3-208ENST00000465627 MUC6Q6W4X9 2439 aa10.19□□□□□ -0.78
UBA3-208ENST00000465627 VPS37CA5D8V6 355 aaPredicted RBP10.19□□□□□ -0.78
UBA3-208ENST00000465627 KIF28PB7ZC32 967 aa10.19□□□□□ -0.78
UBA3-208ENST00000465627 F5H6K3 240 aa10.19□□□□□ -0.78
UBA3-208ENST00000465627 TNFRSF10AO00220 468 aa10.19□□□□□ -0.78
UBA3-208ENST00000465627 CTNND1O60716 968 aaKnown RBP10.19□□□□□ -0.78
UBA3-208ENST00000465627 NDUFB10O96000 172 aa10.19□□□□□ -0.78
UBA3-208ENST00000465627 ASNSP08243 561 aa10.19□□□□□ -0.78
UBA3-208ENST00000465627 PARP1P09874 1014 aaKnown RBP10.19□□□□□ -0.78
UBA3-208ENST00000465627 U2AF2P26368 475 aaKnown RBP eCLIP10.19□□□□□ -0.782e-6■■□□□ 12.6
UBA3-208ENST00000465627 KLRC3Q07444 240 aa10.19□□□□□ -0.78
UBA3-208ENST00000465627 PFKFB3Q16875 520 aaPredicted RBP10.19□□□□□ -0.78
UBA3-208ENST00000465627 NOL9Q5SY16 702 aaKnown RBP10.19□□□□□ -0.78
UBA3-208ENST00000465627 FOXD4L5Q5VV16 416 aaPredicted RBP10.19□□□□□ -0.78
UBA3-208ENST00000465627 PRAMEF18Q5VWM3 479 aa10.19□□□□□ -0.78
UBA3-208ENST00000465627 KRT40Q6A162 431 aa10.19□□□□□ -0.78
UBA3-208ENST00000465627 TYW1BQ6NUM6 668 aa10.19□□□□□ -0.78
UBA3-208ENST00000465627 BTNL9Q6UXG8 535 aa10.19□□□□□ -0.78
UBA3-208ENST00000465627 TRIM22Q8IYM9 498 aa10.19□□□□□ -0.78
UBA3-208ENST00000465627 CCDC82Q8N4S0 544 aa10.19□□□□□ -0.78
UBA3-208ENST00000465627 DCAF4Q8WV16 495 aa10.19□□□□□ -0.78
UBA3-208ENST00000465627 FOXD4L4Q8WXT5 416 aaPredicted RBP10.19□□□□□ -0.78
UBA3-208ENST00000465627 C8orf76Q96K31 380 aa10.19□□□□□ -0.78
UBA3-208ENST00000465627 TRIM34Q9BYJ4 488 aa10.19□□□□□ -0.78
UBA3-208ENST00000465627 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.19□□□□□ -0.78
UBA3-208ENST00000465627 PTPN22Q9Y2R2 807 aa10.19□□□□□ -0.78
UBA3-208ENST00000465627 PARP14Q460N5 1801 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms