RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 GRB14Q14449 540 aa11.66□□□□□ -0.54
CTNNB1-211ENST00000465552 MORN1Q5T089 497 aa11.66□□□□□ -0.54
CTNNB1-211ENST00000465552 ERICH6BQ5W0A0 696 aa11.66□□□□□ -0.54
CTNNB1-211ENST00000465552 RIOX2Q8IUF8 465 aa11.66□□□□□ -0.54
CTNNB1-211ENST00000465552 PNMA1Q8ND90 353 aa11.66□□□□□ -0.54
CTNNB1-211ENST00000465552 NCOA7Q8NI08 942 aa11.66□□□□□ -0.54
CTNNB1-211ENST00000465552 NPLOC4Q8TAT6 608 aa11.66□□□□□ -0.54
CTNNB1-211ENST00000465552 DCAF4Q8WV16 495 aa11.66□□□□□ -0.54
CTNNB1-211ENST00000465552 RNF208Q9H0X6 261 aa11.66□□□□□ -0.54
CTNNB1-211ENST00000465552 CPVLQ9H3G5 476 aa11.66□□□□□ -0.54
CTNNB1-211ENST00000465552 KAT14Q9H8E8 782 aa11.66□□□□□ -0.54
CTNNB1-211ENST00000465552 COLQQ9Y215 455 aaPredicted RBP11.66□□□□□ -0.54
CTNNB1-211ENST00000465552 RIPK3Q9Y572 518 aa11.66□□□□□ -0.54
CTNNB1-211ENST00000465552 SLC15A5A6NIM6 579 aa11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 SLC27A2O14975 620 aa11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 HMGCRP04035 888 aa11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 PGK2P07205 417 aa11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 EN2P19622 333 aaPredicted RBP11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 COL9A3Q14050 684 aaPredicted RBP11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 IFIT1BQ5T764 474 aaKnown RBP11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 CREB3L3Q68CJ9 461 aa11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 FAM160B2Q86V87 743 aa11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 SHCBP1Q8NEM2 672 aa11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 PXYLP1Q8TE99 480 aa11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 USP6NLQ92738 828 aa11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 MMP19Q99542 508 aa11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 TEX13BQ9BXU2 312 aa11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 SLC38A10Q9HBR0 1119 aa11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 SENP2Q9HC62 589 aa11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 FLRT1Q9NZU1 646 aa11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 PRR12Q9ULL5 1215 aa11.65□□□□□ -0.54
CTNNB1-211ENST00000465552 TNRC18O15417 2968 aaPredicted RBP11.64□□□□□ -0.55
CTNNB1-211ENST00000465552 IFIT3O14879 490 aaKnown RBP11.64□□□□□ -0.55
CTNNB1-211ENST00000465552 SLC25A27O95847 323 aa11.64□□□□□ -0.55
CTNNB1-211ENST00000465552 ALAS1P13196 640 aa11.64□□□□□ -0.55
CTNNB1-211ENST00000465552 ANTXR2P58335 489 aa11.64□□□□□ -0.55
CTNNB1-211ENST00000465552 ZNF543Q08ER8 600 aa11.64□□□□□ -0.55
CTNNB1-211ENST00000465552 SYDE2Q5VT97 1194 aa11.64□□□□□ -0.55
CTNNB1-211ENST00000465552 DPP9Q86TI2 863 aa11.64□□□□□ -0.55
CTNNB1-211ENST00000465552 DGKHQ86XP1 1220 aa11.64□□□□□ -0.55
CTNNB1-211ENST00000465552 MB21D2Q8IYB1 491 aaPredicted RBP11.64□□□□□ -0.55
CTNNB1-211ENST00000465552 CHURC1Q8WUH1 139 aa11.64□□□□□ -0.55
CTNNB1-211ENST00000465552 AGBL1Q96MI9 1066 aa11.64□□□□□ -0.55
CTNNB1-211ENST00000465552 TTC14Q96N46 770 aa11.64□□□□□ -0.55
CTNNB1-211ENST00000465552 MROH8Q9H579 483 aa11.64□□□□□ -0.55
CTNNB1-211ENST00000465552 ZNF536O15090 1300 aa11.63□□□□□ -0.55
CTNNB1-211ENST00000465552 ERICH2A1L162 156 aa11.63□□□□□ -0.55
CTNNB1-211ENST00000465552 POTEMA6NI47 508 aa11.63□□□□□ -0.55
CTNNB1-211ENST00000465552 DHX16O60231 1041 aaKnown RBP11.63□□□□□ -0.55
CTNNB1-211ENST00000465552 COBLO75128 1261 aa11.63□□□□□ -0.55
CTNNB1-211ENST00000465552 SEC24BO95487 1268 aa11.63□□□□□ -0.55
CTNNB1-211ENST00000465552 FCER1AP12319 257 aa11.63□□□□□ -0.55
CTNNB1-211ENST00000465552 KCTD2Q14681 263 aa11.63□□□□□ -0.55
CTNNB1-211ENST00000465552 SEC23AQ15436 765 aa11.63□□□□□ -0.55
CTNNB1-211ENST00000465552 CCDC178Q5BJE1 867 aa11.63□□□□□ -0.55
CTNNB1-211ENST00000465552 SHISA4Q96DD7 197 aa11.63□□□□□ -0.55
CTNNB1-211ENST00000465552 DEFB118Q96PH6 123 aa11.63□□□□□ -0.55
CTNNB1-211ENST00000465552 LRRC2Q9BYS8 371 aa11.63□□□□□ -0.55
CTNNB1-211ENST00000465552 UBA5Q9GZZ9 404 aa11.63□□□□□ -0.55
CTNNB1-211ENST00000465552 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.63□□□□□ -0.55
CTNNB1-211ENST00000465552 GPHNQ9NQX3 736 aaPredicted RBP11.63□□□□□ -0.55
CTNNB1-211ENST00000465552 MKI67P46013 3256 aaKnown RBP11.63□□□□□ -0.55
CTNNB1-211ENST00000465552 SNHG28P0DPA3 235 aa11.62□□□□□ -0.55
CTNNB1-211ENST00000465552 XRCC5P13010 732 aaKnown RBP11.62□□□□□ -0.55
CTNNB1-211ENST00000465552 CCND3P30281 292 aaPredicted RBP11.62□□□□□ -0.55
CTNNB1-211ENST00000465552 CYP2C19P33261 490 aa11.62□□□□□ -0.55
CTNNB1-211ENST00000465552 VASPP50552 380 aaPredicted RBP11.62□□□□□ -0.55
CTNNB1-211ENST00000465552 MLLT1Q03111 559 aaPredicted RBP11.62□□□□□ -0.55
CTNNB1-211ENST00000465552 CACNB2Q08289 660 aaPredicted RBP11.62□□□□□ -0.55
CTNNB1-211ENST00000465552 WTAPQ15007 396 aa11.62□□□□□ -0.55
CTNNB1-211ENST00000465552 NECTIN1Q15223 517 aa11.62□□□□□ -0.55
CTNNB1-211ENST00000465552 TMEM67Q5HYA8 995 aa11.62□□□□□ -0.55
CTNNB1-211ENST00000465552 TCEANC2Q96MN5 208 aa11.62□□□□□ -0.55
CTNNB1-211ENST00000465552 MYL10Q9BUA6 226 aa11.62□□□□□ -0.55
CTNNB1-211ENST00000465552 RNF146Q9NTX7 359 aa11.62□□□□□ -0.55
CTNNB1-211ENST00000465552 CCPG1Q9ULG6 757 aa11.62□□□□□ -0.55
CTNNB1-211ENST00000465552 PDE4DIPQ5VU43 2346 aa11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 PRC1O43663 620 aa11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 STRNO43815 780 aa11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 PARP1P09874 1014 aaKnown RBP11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 CNGA1P29973 690 aa11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 COPB2P35606 906 aa11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 SART3Q15020 963 aaKnown RBP11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 USH1GQ495M9 461 aa11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 MUM1L1Q5H9M0 696 aa11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 RNF20Q5VTR2 975 aa11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 POTEGQ6S5H5 508 aa11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 RAB11FIP4Q86YS3 637 aa11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 STAG2Q8N3U4 1231 aa11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 U2AF1L4Q8WU68 220 aaKnown RBP11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 DDX11Q96FC9 970 aa11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 MAML3Q96JK9 1138 aa11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 TRERF1Q96PN7 1200 aa11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 RANBP17Q9H2T7 1088 aaKnown RBP11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 ACAD9Q9H845 621 aa11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 HMX1Q9NP08 348 aaPredicted RBP11.61□□□□□ -0.55
CTNNB1-211ENST00000465552 RPTORQ8N122 1335 aa11.6□□□□□ -0.55
CTNNB1-211ENST00000465552 ATP2A1O14983 1001 aa11.6□□□□□ -0.55
CTNNB1-211ENST00000465552 PLA2G6O60733 806 aa11.6□□□□□ -0.55
CTNNB1-211ENST00000465552 GJB1P08034 283 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms