RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SMCHD1A6NHR9 2005 aa23.71■■□□□ 1.39
SKA3-205ENST00000465471 ICAM1P05362 532 aa23.71■■□□□ 1.39
SKA3-205ENST00000465471 RPS6KB1P23443 525 aa23.71■■□□□ 1.39
SKA3-205ENST00000465471 GRK4P32298 578 aa23.71■■□□□ 1.39
SKA3-205ENST00000465471 RGS2P41220 211 aa23.71■■□□□ 1.39
SKA3-205ENST00000465471 MAP2K5Q13163 448 aa23.71■■□□□ 1.39
SKA3-205ENST00000465471 AGBL1Q96MI9 1066 aa23.71■■□□□ 1.39
SKA3-205ENST00000465471 AGXT2Q9BYV1 514 aa23.71■■□□□ 1.39
SKA3-205ENST00000465471 CWC22Q9HCG8 908 aaKnown RBP23.71■■□□□ 1.39
SKA3-205ENST00000465471 ZSWIM6Q9HCJ5 1215 aa23.71■■□□□ 1.39
SKA3-205ENST00000465471 CCDC69A6NI79 296 aa23.7■■□□□ 1.38
SKA3-205ENST00000465471 KLRF2D3W0D1 207 aa23.7■■□□□ 1.38
SKA3-205ENST00000465471 ADCY3O60266 1144 aa23.7■■□□□ 1.38
SKA3-205ENST00000465471 CASTP20810 708 aaKnown RBP23.7■■□□□ 1.38
SKA3-205ENST00000465471 ADORA2AP29274 412 aa23.7■■□□□ 1.38
SKA3-205ENST00000465471 ANAPC15P60006 121 aa23.7■■□□□ 1.38
SKA3-205ENST00000465471 SLC35G1Q2M3R5 365 aa23.7■■□□□ 1.38
SKA3-205ENST00000465471 SLC9C1Q4G0N8 1177 aa23.7■■□□□ 1.38
SKA3-205ENST00000465471 CCDC174Q6PII3 467 aa23.7■■□□□ 1.38
SKA3-205ENST00000465471 ADGRF4Q8IZF3 695 aa23.7■■□□□ 1.38
SKA3-205ENST00000465471 CHST13Q8NET6 341 aa23.7■■□□□ 1.38
SKA3-205ENST00000465471 MTMR8Q96EF0 704 aa23.7■■□□□ 1.38
SKA3-205ENST00000465471 APBA2Q99767 749 aa23.7■■□□□ 1.38
SKA3-205ENST00000465471 MYL10Q9BUA6 226 aa23.7■■□□□ 1.38
SKA3-205ENST00000465471 TKFCQ3LXA3 575 aa23.69■■□□□ 1.38
SKA3-205ENST00000465471 NFXL1Q6ZNB6 911 aa23.69■■□□□ 1.38
SKA3-205ENST00000465471 ZNF333Q96JL9 665 aa23.69■■□□□ 1.38
SKA3-205ENST00000465471 JMJD4Q9H9V9 463 aa23.69■■□□□ 1.38
SKA3-205ENST00000465471 FBXO40Q9UH90 709 aa23.69■■□□□ 1.38
SKA3-205ENST00000465471 IGHA2P01877 340 aa23.68■■□□□ 1.38
SKA3-205ENST00000465471 CALM1P0DP23 149 aa23.68■■□□□ 1.38
SKA3-205ENST00000465471 CALM2P0DP24 149 aa23.68■■□□□ 1.38
SKA3-205ENST00000465471 CALM3P0DP25 149 aa23.68■■□□□ 1.38
SKA3-205ENST00000465471 FCER1AP12319 257 aa23.68■■□□□ 1.38
SKA3-205ENST00000465471 CYP2B6P20813 491 aa23.68■■□□□ 1.38
SKA3-205ENST00000465471 APOA5Q6Q788 366 aa23.68■■□□□ 1.38
SKA3-205ENST00000465471 RUFY3Q7L099 469 aa23.68■■□□□ 1.38
SKA3-205ENST00000465471 SH3TC2Q8TF17 1288 aa23.68■■□□□ 1.38
SKA3-205ENST00000465471 BRPF3Q9ULD4 1205 aa23.68■■□□□ 1.38
SKA3-205ENST00000465471 CCPG1Q9ULG6 757 aa23.68■■□□□ 1.38
SKA3-205ENST00000465471 SLC12A7Q9Y666 1083 aa23.68■■□□□ 1.38
SKA3-205ENST00000465471 PLXNA1Q9UIW2 1896 aa23.68■■□□□ 1.38
SKA3-205ENST00000465471 MYH6P13533 1939 aa23.67■■□□□ 1.38
SKA3-205ENST00000465471 COBLO75128 1261 aa23.67■■□□□ 1.38
SKA3-205ENST00000465471 ELNP15502 786 aa23.67■■□□□ 1.38
SKA3-205ENST00000465471 CDC37Q16543 378 aaPredicted RBP23.67■■□□□ 1.38
SKA3-205ENST00000465471 Q6ZUG5 572 aa23.67■■□□□ 1.38
SKA3-205ENST00000465471 NBPF11Q86T75 865 aa23.67■■□□□ 1.38
SKA3-205ENST00000465471 NUP133Q8WUM0 1156 aa23.67■■□□□ 1.38
SKA3-205ENST00000465471 TRIB2Q92519 343 aa23.67■■□□□ 1.38
SKA3-205ENST00000465471 MMP19Q99542 508 aa23.67■■□□□ 1.38
SKA3-205ENST00000465471 RIOX1Q9H6W3 641 aa23.67■■□□□ 1.38
SKA3-205ENST00000465471 RNF146Q9NTX7 359 aa23.67■■□□□ 1.38
SKA3-205ENST00000465471 PNMA2Q9UL42 364 aa23.67■■□□□ 1.38
SKA3-205ENST00000465471 RBBP6Q7Z6E9 1792 aaKnown RBP23.67■■□□□ 1.38
SKA3-205ENST00000465471 CYTH3O43739 400 aa23.66■■□□□ 1.38
SKA3-205ENST00000465471 KIF5BP33176 963 aa23.66■■□□□ 1.38
SKA3-205ENST00000465471 RCAN1P53805 252 aa23.66■■□□□ 1.38
SKA3-205ENST00000465471 KCTD2Q14681 263 aa23.66■■□□□ 1.38
SKA3-205ENST00000465471 TRMT44Q8IYL2 757 aaKnown RBP23.66■■□□□ 1.38
SKA3-205ENST00000465471 CTCFLQ8NI51 663 aaPredicted RBP23.66■■□□□ 1.38
SKA3-205ENST00000465471 NPLOC4Q8TAT6 608 aa23.66■■□□□ 1.38
SKA3-205ENST00000465471 ACAD9Q9H845 621 aa23.66■■□□□ 1.38
SKA3-205ENST00000465471 DNAJC25-GNG10A0A024R161 153 aa23.65■■□□□ 1.38
SKA3-205ENST00000465471 HMGCRP04035 888 aa23.65■■□□□ 1.38
SKA3-205ENST00000465471 ALAS1P13196 640 aa23.65■■□□□ 1.38
SKA3-205ENST00000465471 TAL1P17542 331 aaPredicted RBP23.65■■□□□ 1.38
SKA3-205ENST00000465471 SMARCA1P28370 1054 aa23.65■■□□□ 1.38
SKA3-205ENST00000465471 CCL14Q16627 93 aa23.65■■□□□ 1.38
SKA3-205ENST00000465471 QRICH1Q2TAL8 776 aa23.65■■□□□ 1.38
SKA3-205ENST00000465471 TRERF1Q96PN7 1200 aa23.65■■□□□ 1.38
SKA3-205ENST00000465471 HOMER2Q9NSB8 354 aa23.65■■□□□ 1.38
SKA3-205ENST00000465471 FLRT1Q9NZU1 646 aa23.65■■□□□ 1.38
SKA3-205ENST00000465471 LCTP09848 1927 aa23.65■■□□□ 1.38
SKA3-205ENST00000465471 NID2Q14112 1375 aa23.65■■□□□ 1.38
SKA3-205ENST00000465471 BRCA2P51587 3418 aa23.64■■□□□ 1.38
SKA3-205ENST00000465471 BAZ2BQ9UIF8 2168 aaKnown RBP23.64■■□□□ 1.38
SKA3-205ENST00000465471 INHAP05111 366 aa23.64■■□□□ 1.37
SKA3-205ENST00000465471 RXRAP19793 462 aa23.64■■□□□ 1.37
SKA3-205ENST00000465471 SLC4A3P48751 1232 aa23.64■■□□□ 1.37
SKA3-205ENST00000465471 EVCP57679 992 aa23.64■■□□□ 1.37
SKA3-205ENST00000465471 ZNF792Q3KQV3 632 aa23.64■■□□□ 1.37
SKA3-205ENST00000465471 MUM1L1Q5H9M0 696 aa23.64■■□□□ 1.37
SKA3-205ENST00000465471 MICU3Q86XE3 530 aa23.64■■□□□ 1.37
SKA3-205ENST00000465471 FANCBQ8NB91 859 aa23.64■■□□□ 1.37
SKA3-205ENST00000465471 BRF1Q92994 677 aa23.64■■□□□ 1.37
SKA3-205ENST00000465471 SPZ1Q9BXG8 430 aa23.64■■□□□ 1.37
SKA3-205ENST00000465471 CYP46A1Q9Y6A2 500 aa23.64■■□□□ 1.37
SKA3-205ENST00000465471 KLF18A0A0U1RQI7 1052 aa23.63■■□□□ 1.37
SKA3-205ENST00000465471 PGK2P07205 417 aa23.63■■□□□ 1.37
SKA3-205ENST00000465471 MAP3K21Q5TCX8 1036 aa23.63■■□□□ 1.37
SKA3-205ENST00000465471 OLFML2BQ68BL8 750 aa23.63■■□□□ 1.37
SKA3-205ENST00000465471 DPP9Q86TI2 863 aa23.63■■□□□ 1.37
SKA3-205ENST00000465471 LZTS2Q9BRK4 669 aa23.63■■□□□ 1.37
SKA3-205ENST00000465471 UPF3BQ9BZI7 483 aaKnown RBP23.63■■□□□ 1.37
SKA3-205ENST00000465471 A1CFQ9NQ94 594 aaKnown RBP23.63■■□□□ 1.37
SKA3-205ENST00000465471 DIS3Q9Y2L1 958 aaKnown RBP23.63■■□□□ 1.37
SKA3-205ENST00000465471 ZBTB5O15062 677 aa23.62■■□□□ 1.37
SKA3-205ENST00000465471 ZBTB43O43298 467 aa23.62■■□□□ 1.37
SKA3-205ENST00000465471 PLEKHA8P1O95397 391 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms