RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 AGBL1Q96MI9 1066 aa26.04■■□□□ 1.76
UBA3-206ENST00000464605 LSG1Q9H089 658 aaKnown RBP26.04■■□□□ 1.76
UBA3-206ENST00000464605 SLC5A4Q9NY91 659 aa26.04■■□□□ 1.76
UBA3-206ENST00000464605 DIS3Q9Y2L1 958 aaKnown RBP26.04■■□□□ 1.76
UBA3-206ENST00000464605 CTDP1Q9Y5B0 961 aaPredicted RBP26.04■■□□□ 1.76
UBA3-206ENST00000464605 FRMPD2Q68DX3 1309 aaPredicted RBP26.04■■□□□ 1.76
UBA3-206ENST00000464605 MYH6P13533 1939 aa26.04■■□□□ 1.76
UBA3-206ENST00000464605 CYBAP13498 195 aa26.03■■□□□ 1.76
UBA3-206ENST00000464605 SLC4A3P48751 1232 aa26.03■■□□□ 1.76
UBA3-206ENST00000464605 STOX1Q6ZVD7 989 aa26.03■■□□□ 1.76
UBA3-206ENST00000464605 GPCPD1Q9NPB8 672 aa26.03■■□□□ 1.76
UBA3-206ENST00000464605 RBM8AQ9Y5S9 174 aaKnown RBP26.03■■□□□ 1.76
UBA3-206ENST00000464605 LCTP09848 1927 aa26.03■■□□□ 1.76
UBA3-206ENST00000464605 TNKSO95271 1327 aa26.03■■□□□ 1.76
UBA3-206ENST00000464605 SEC23AQ15436 765 aa26.02■■□□□ 1.76
UBA3-206ENST00000464605 CHST13Q8NET6 341 aa26.02■■□□□ 1.76
UBA3-206ENST00000464605 RANBP17Q9H2T7 1088 aaKnown RBP26.02■■□□□ 1.76
UBA3-206ENST00000464605 E7EWF7 191 aa26.01■■□□□ 1.75
UBA3-206ENST00000464605 SYDE2Q5VT97 1194 aa26.01■■□□□ 1.75
UBA3-206ENST00000464605 PNMA1Q8ND90 353 aa26.01■■□□□ 1.75
UBA3-206ENST00000464605 DIS3LQ8TF46 1054 aaKnown RBP26.01■■□□□ 1.75
UBA3-206ENST00000464605 PRAMEF19Q5SWL8 479 aa26■■□□□ 1.75
UBA3-206ENST00000464605 CCDC174Q6PII3 467 aa26■■□□□ 1.75
UBA3-206ENST00000464605 ANKLE1Q8NAG6 615 aa26■■□□□ 1.75
UBA3-206ENST00000464605 FGD4Q96M96 766 aa26■■□□□ 1.75
UBA3-206ENST00000464605 FBXO40Q9UH90 709 aa26■■□□□ 1.75
UBA3-206ENST00000464605 BAZ2BQ9UIF8 2168 aaKnown RBP25.99■■□□□ 1.75
UBA3-206ENST00000464605 NEFLP07196 543 aa25.99■■□□□ 1.75
UBA3-206ENST00000464605 TAL1P17542 331 aaPredicted RBP25.99■■□□□ 1.75
UBA3-206ENST00000464605 FXR1P51114 621 aaKnown RBP eCLIP25.99■■□□□ 1.75
UBA3-206ENST00000464605 PAWRQ96IZ0 340 aaKnown RBP25.99■■□□□ 1.75
UBA3-206ENST00000464605 TINF2Q9BSI4 451 aa25.99■■□□□ 1.75
UBA3-206ENST00000464605 HOMER2Q9NSB8 354 aa25.99■■□□□ 1.75
UBA3-206ENST00000464605 GOLGA8HP0CJ92 632 aa25.98■■□□□ 1.75
UBA3-206ENST00000464605 TKFCQ3LXA3 575 aa25.98■■□□□ 1.75
UBA3-206ENST00000464605 DDX11Q96FC9 970 aa25.98■■□□□ 1.75
UBA3-206ENST00000464605 UBAC1Q9BSL1 405 aa25.98■■□□□ 1.75
UBA3-206ENST00000464605 ACAD9Q9H845 621 aa25.98■■□□□ 1.75
UBA3-206ENST00000464605 KAT14Q9H8E8 782 aa25.98■■□□□ 1.75
UBA3-206ENST00000464605 RNF146Q9NTX7 359 aa25.98■■□□□ 1.75
UBA3-206ENST00000464605 DDX20Q9UHI6 824 aaKnown RBP25.98■■□□□ 1.75
UBA3-206ENST00000464605 ICAM1P05362 532 aa25.97■■□□□ 1.75
UBA3-206ENST00000464605 TRDNQ13061 729 aa25.97■■□□□ 1.75
UBA3-206ENST00000464605 MUM1L1Q5H9M0 696 aa25.97■■□□□ 1.75
UBA3-206ENST00000464605 KIAA1211Q6ZU35 1233 aa25.97■■□□□ 1.75
UBA3-206ENST00000464605 ANKRD35Q8N283 1001 aa25.97■■□□□ 1.75
UBA3-206ENST00000464605 TRERF1Q96PN7 1200 aa25.97■■□□□ 1.75
UBA3-206ENST00000464605 CPVLQ9H3G5 476 aa25.97■■□□□ 1.75
UBA3-206ENST00000464605 A1CFQ9NQ94 594 aaKnown RBP25.97■■□□□ 1.75
UBA3-206ENST00000464605 NR2E3Q9Y5X4 410 aa25.97■■□□□ 1.75
UBA3-206ENST00000464605 ALAS1P13196 640 aa25.96■■□□□ 1.75
UBA3-206ENST00000464605 CNGA1P29973 690 aa25.96■■□□□ 1.75
UBA3-206ENST00000464605 NECTIN1Q15223 517 aa25.96■■□□□ 1.75
UBA3-206ENST00000464605 GPATCH4Q5T3I0 446 aaKnown RBP25.96■■□□□ 1.75
UBA3-206ENST00000464605 MAMDC4Q6UXC1 1216 aa25.96■■□□□ 1.75
UBA3-206ENST00000464605 CHRDL2Q6WN34 429 aa25.96■■□□□ 1.75
UBA3-206ENST00000464605 NCOA7Q8NI08 942 aa25.96■■□□□ 1.75
UBA3-206ENST00000464605 SENP2Q9HC62 589 aa25.96■■□□□ 1.75
UBA3-206ENST00000464605 ANTXR2P58335 489 aa25.95■■□□□ 1.74
UBA3-206ENST00000464605 COL9A3Q14050 684 aaPredicted RBP25.95■■□□□ 1.74
UBA3-206ENST00000464605 IFIT1BQ5T764 474 aaKnown RBP25.95■■□□□ 1.74
UBA3-206ENST00000464605 ZNF467Q7Z7K2 595 aaPredicted RBP25.95■■□□□ 1.74
UBA3-206ENST00000464605 MB21D2Q8IYB1 491 aaPredicted RBP25.95■■□□□ 1.74
UBA3-206ENST00000464605 UBA5Q9GZZ9 404 aa25.95■■□□□ 1.74
UBA3-206ENST00000464605 NRBP1Q9UHY1 535 aa25.95■■□□□ 1.74
UBA3-206ENST00000464605 CCPG1Q9ULG6 757 aa25.95■■□□□ 1.74
UBA3-206ENST00000464605 SLC27A2O14975 620 aa25.94■■□□□ 1.74
UBA3-206ENST00000464605 SEPT4O43236 478 aa25.94■■□□□ 1.74
UBA3-206ENST00000464605 SNAI1O95863 264 aaPredicted RBP25.94■■□□□ 1.74
UBA3-206ENST00000464605 CHST3Q7LGC8 479 aa25.94■■□□□ 1.74
UBA3-206ENST00000464605 NECAB2Q7Z6G3 386 aa25.94■■□□□ 1.74
UBA3-206ENST00000464605 MSL3Q8N5Y2 521 aaKnown RBP25.94■■□□□ 1.74
UBA3-206ENST00000464605 FAM133AQ8N9E0 248 aa25.94■■□□□ 1.74
UBA3-206ENST00000464605 MSCO60682 206 aa25.93■■□□□ 1.74
UBA3-206ENST00000464605 CDC45O75419 566 aa25.93■■□□□ 1.74
UBA3-206ENST00000464605 ZNF865P0CJ78 1059 aaPredicted RBP25.93■■□□□ 1.74
UBA3-206ENST00000464605 COL6A1P12109 1028 aa25.93■■□□□ 1.74
UBA3-206ENST00000464605 CNTN2Q02246 1040 aa25.93■■□□□ 1.74
UBA3-206ENST00000464605 PRO3102Q9H379 93 aa25.93■■□□□ 1.74
UBA3-206ENST00000464605 ANO2Q9NQ90 1003 aa25.93■■□□□ 1.74
UBA3-206ENST00000464605 SYNGAP1Q96PV0 1343 aa25.92■■□□□ 1.74
UBA3-206ENST00000464605 EVI5O60447 810 aa25.92■■□□□ 1.74
UBA3-206ENST00000464605 ASPRV1Q53RT3 343 aa25.92■■□□□ 1.74
UBA3-206ENST00000464605 CREB3L3Q68CJ9 461 aa25.92■■□□□ 1.74
UBA3-206ENST00000464605 RALYLQ86SE5 291 aaKnown RBP25.92■■□□□ 1.74
UBA3-206ENST00000464605 IGDCC4Q8TDY8 1250 aa25.92■■□□□ 1.74
UBA3-206ENST00000464605 CYP39A1Q9NYL5 469 aa25.92■■□□□ 1.74
UBA3-206ENST00000464605 RBM27Q9P2N5 1060 aaKnown RBP25.92■■□□□ 1.74
UBA3-206ENST00000464605 ASTN1O14525 1302 aa25.91■■□□□ 1.74
UBA3-206ENST00000464605 PFASO15067 1338 aa25.91■■□□□ 1.74
UBA3-206ENST00000464605 SOWAHBA6NEL2 793 aa25.91■■□□□ 1.74
UBA3-206ENST00000464605 IFIT3O14879 490 aaKnown RBP25.91■■□□□ 1.74
UBA3-206ENST00000464605 ANO1Q5XXA6 986 aa25.91■■□□□ 1.74
UBA3-206ENST00000464605 STAG2Q8N3U4 1231 aa25.91■■□□□ 1.74
UBA3-206ENST00000464605 CLEC4DQ8WXI8 215 aa25.91■■□□□ 1.74
UBA3-206ENST00000464605 RANBP2P49792 3224 aaKnown RBP25.91■■□□□ 1.74
UBA3-206ENST00000464605 WDR19Q8NEZ3 1342 aa25.9■■□□□ 1.74
UBA3-206ENST00000464605 PARP1P09874 1014 aaKnown RBP25.9■■□□□ 1.74
UBA3-206ENST00000464605 ERICH6BQ5W0A0 696 aa25.9■■□□□ 1.74
UBA3-206ENST00000464605 ADGRF4Q8IZF3 695 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms