RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 JMJD4Q9H9V9 463 aa24.69■■□□□ 1.54
PDLIM2-216ENST00000464275 MAN1B1Q9UKM7 699 aa24.69■■□□□ 1.54
PDLIM2-216ENST00000464275 SPDYE2BA6NHP3 402 aa24.68■■□□□ 1.54
PDLIM2-216ENST00000464275 SPDYE6P0CI01 402 aa24.68■■□□□ 1.54
PDLIM2-216ENST00000464275 EEF2P13639 858 aaKnown RBP24.68■■□□□ 1.54
PDLIM2-216ENST00000464275 SH3RF1Q7Z6J0 888 aa24.68■■□□□ 1.54
PDLIM2-216ENST00000464275 DCAF4Q8WV16 495 aa24.68■■□□□ 1.54
PDLIM2-216ENST00000464275 NCAPHQ15003 741 aa24.67■■□□□ 1.54
PDLIM2-216ENST00000464275 DLGAP5Q15398 846 aa24.67■■□□□ 1.54
PDLIM2-216ENST00000464275 NIM1KQ8IY84 436 aa24.67■■□□□ 1.54
PDLIM2-216ENST00000464275 ZNRF3Q9ULT6 936 aa24.67■■□□□ 1.54
PDLIM2-216ENST00000464275 SMC2O95347 1197 aa24.67■■□□□ 1.54
PDLIM2-216ENST00000464275 ABCB5Q2M3G0 1257 aa24.67■■□□□ 1.54
PDLIM2-216ENST00000464275 REXO1Q8N1G1 1221 aaKnown RBP24.67■■□□□ 1.54
PDLIM2-216ENST00000464275 OGFOD1Q8N543 542 aa24.67■■□□□ 1.54
PDLIM2-216ENST00000464275 SPATA20Q8TB22 786 aa24.67■■□□□ 1.54
PDLIM2-216ENST00000464275 PRPHP41219 470 aa24.66■■□□□ 1.54
PDLIM2-216ENST00000464275 ORC2Q13416 577 aaPredicted RBP24.66■■□□□ 1.54
PDLIM2-216ENST00000464275 TTBK2Q6IQ55 1244 aa24.66■■□□□ 1.54
PDLIM2-216ENST00000464275 DTHD1Q6ZMT9 781 aa24.66■■□□□ 1.54
PDLIM2-216ENST00000464275 GRAMD1CQ8IYS0 662 aa24.66■■□□□ 1.54
PDLIM2-216ENST00000464275 MTMR8Q96EF0 704 aa24.66■■□□□ 1.54
PDLIM2-216ENST00000464275 DACH1Q9UI36 760 aa24.66■■□□□ 1.54
PDLIM2-216ENST00000464275 NEMFO60524 1076 aa24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 ADCY7P51828 1080 aa24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 MORC3Q14149 939 aa24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 SEPT2Q15019 361 aa24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 IQUBQ8NA54 791 aa24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 AGBL3Q8NEM8 1001 aa24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 COA7Q96BR5 231 aa24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 PAGE5Q96GU1 130 aa24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 ZNF70Q9UC06 446 aaPredicted RBP24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 HERC5Q9UII4 1024 aaKnown RBP24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 TXLNAP40222 546 aa24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 ICA1Q05084 483 aa24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 SLFN13Q68D06 897 aa24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 KCTD1Q719H9 257 aa24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 NEK8Q86SG6 692 aa24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 MLKLQ8NB16 471 aa24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 CSRNP1Q96S65 589 aa24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 MYH7BA7E2Y1 1941 aa24.65■■□□□ 1.54
PDLIM2-216ENST00000464275 POLD1P28340 1107 aa24.64■■□□□ 1.54
PDLIM2-216ENST00000464275 MYL5Q02045 173 aa24.64■■□□□ 1.54
PDLIM2-216ENST00000464275 E2F4Q16254 413 aa24.64■■□□□ 1.54
PDLIM2-216ENST00000464275 RBM26Q5T8P6 1007 aaKnown RBP24.64■■□□□ 1.54
PDLIM2-216ENST00000464275 FAM151AQ8WW52 585 aa24.64■■□□□ 1.54
PDLIM2-216ENST00000464275 ZBTB5O15062 677 aa24.63■■□□□ 1.53
PDLIM2-216ENST00000464275 ZBTB7AO95365 584 aa24.63■■□□□ 1.53
PDLIM2-216ENST00000464275 BMP6P22004 513 aa24.63■■□□□ 1.53
PDLIM2-216ENST00000464275 SHROOM1Q2M3G4 852 aaPredicted RBP24.63■■□□□ 1.53
PDLIM2-216ENST00000464275 MTMR14Q8NCE2 650 aa24.63■■□□□ 1.53
PDLIM2-216ENST00000464275 TMEM60Q9H2L4 133 aa24.63■■□□□ 1.53
PDLIM2-216ENST00000464275 BIN2Q9UBW5 565 aaPredicted RBP24.63■■□□□ 1.53
PDLIM2-216ENST00000464275 PYCARDQ9ULZ3 195 aa24.63■■□□□ 1.53
PDLIM2-216ENST00000464275 TCP10L2B9ZVM9 353 aa24.63■■□□□ 1.53
PDLIM2-216ENST00000464275 GDF11O95390 407 aa24.63■■□□□ 1.53
PDLIM2-216ENST00000464275 SPDYE2Q495Y8 402 aa24.63■■□□□ 1.53
PDLIM2-216ENST00000464275 JAKMIP3Q5VZ66 844 aa24.63■■□□□ 1.53
PDLIM2-216ENST00000464275 SIAH1Q8IUQ4 282 aa24.63■■□□□ 1.53
PDLIM2-216ENST00000464275 MYO1BO43795 1136 aa24.62■■□□□ 1.53
PDLIM2-216ENST00000464275 SLC16A2P36021 539 aa24.62■■□□□ 1.53
PDLIM2-216ENST00000464275 SLC1A4P43007 532 aa24.62■■□□□ 1.53
PDLIM2-216ENST00000464275 LETM2Q2VYF4 491 aa24.62■■□□□ 1.53
PDLIM2-216ENST00000464275 DALRD3Q5D0E6 543 aaKnown RBP24.62■■□□□ 1.53
PDLIM2-216ENST00000464275 CCDC186Q7Z3E2 898 aa24.62■■□□□ 1.53
PDLIM2-216ENST00000464275 GMCL1P1Q8NEA9 526 aa24.62■■□□□ 1.53
PDLIM2-216ENST00000464275 MTFR1LQ9H019 292 aa24.62■■□□□ 1.53
PDLIM2-216ENST00000464275 RIC8AQ9NPQ8 531 aa24.62■■□□□ 1.53
PDLIM2-216ENST00000464275 ZBTB12Q9Y330 459 aaPredicted RBP24.62■■□□□ 1.53
PDLIM2-216ENST00000464275 USP17L10C9JJH3 530 aa24.62■■□□□ 1.53
PDLIM2-216ENST00000464275 PTGS1P23219 599 aa24.62■■□□□ 1.53
PDLIM2-216ENST00000464275 AFMP43652 599 aa24.62■■□□□ 1.53
PDLIM2-216ENST00000464275 TBCKQ8TEA7 893 aa24.62■■□□□ 1.53
PDLIM2-216ENST00000464275 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.62■■□□□ 1.53
PDLIM2-216ENST00000464275 CLRN2A0PK11 232 aa24.61■■□□□ 1.53
PDLIM2-216ENST00000464275 CCNT1O60563 726 aaKnown RBP24.61■■□□□ 1.53
PDLIM2-216ENST00000464275 DPYDQ12882 1025 aa24.61■■□□□ 1.53
PDLIM2-216ENST00000464275 FKBP1CQ5VVH2 108 aa24.61■■□□□ 1.53
PDLIM2-216ENST00000464275 TMEM260Q9NX78 707 aa24.61■■□□□ 1.53
PDLIM2-216ENST00000464275 ATF5Q9Y2D1 282 aaPredicted RBP24.61■■□□□ 1.53
PDLIM2-216ENST00000464275 PPP1R11O60927 126 aaPredicted RBP24.6■■□□□ 1.53
PDLIM2-216ENST00000464275 OR52Z1P0C646 297 aa24.6■■□□□ 1.53
PDLIM2-216ENST00000464275 CT47A1Q5JQC4 288 aaPredicted RBP24.6■■□□□ 1.53
PDLIM2-216ENST00000464275 PDXDC2PQ6P474 469 aa24.6■■□□□ 1.53
PDLIM2-216ENST00000464275 GSDMAQ96QA5 445 aa24.6■■□□□ 1.53
PDLIM2-216ENST00000464275 NRBP1Q9UHY1 535 aa24.6■■□□□ 1.53
PDLIM2-216ENST00000464275 SYNPO2Q9UMS6 1093 aa24.6■■□□□ 1.53
PDLIM2-216ENST00000464275 RAD21O60216 631 aa24.6■■□□□ 1.53
PDLIM2-216ENST00000464275 GH2P01242 217 aa24.6■■□□□ 1.53
PDLIM2-216ENST00000464275 GMCL1Q96IK5 515 aa24.6■■□□□ 1.53
PDLIM2-216ENST00000464275 CCSER1Q9C0I3 900 aa24.6■■□□□ 1.53
PDLIM2-216ENST00000464275 CNTNAP1P78357 1384 aa24.59■■□□□ 1.53
PDLIM2-216ENST00000464275 CUL5Q93034 780 aa24.59■■□□□ 1.53
PDLIM2-216ENST00000464275 AK8Q96MA6 479 aa24.59■■□□□ 1.53
PDLIM2-216ENST00000464275 HSD3B7Q9H2F3 369 aa24.59■■□□□ 1.53
PDLIM2-216ENST00000464275 F5H6K3 240 aa24.58■■□□□ 1.53
PDLIM2-216ENST00000464275 LMOD1P29536 600 aaPredicted RBP24.58■■□□□ 1.53
PDLIM2-216ENST00000464275 MRPL12P52815 198 aaKnown RBP24.58■■□□□ 1.53
PDLIM2-216ENST00000464275 CXCL9Q07325 125 aa24.58■■□□□ 1.53
PDLIM2-216ENST00000464275 KLRC3Q07444 240 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms