RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 RAVER2Q9HCJ3 691 aaKnown RBP15.29■□□□□ 0.04
R3HDM1-213ENST00000463230 REC8O95072 547 aa15.29■□□□□ 0.04
R3HDM1-213ENST00000463230 ICAM1P05362 532 aa15.29■□□□□ 0.04
R3HDM1-213ENST00000463230 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.29■□□□□ 0.04
R3HDM1-213ENST00000463230 PLXNA1Q9UIW2 1896 aa15.29■□□□□ 0.04
R3HDM1-213ENST00000463230 ZNF536O15090 1300 aa15.29■□□□□ 0.04
R3HDM1-213ENST00000463230 WDR19Q8NEZ3 1342 aa15.29■□□□□ 0.04
R3HDM1-213ENST00000463230 IFIT3O14879 490 aaKnown RBP15.28■□□□□ 0.04
R3HDM1-213ENST00000463230 KRT32Q14532 448 aa15.28■□□□□ 0.04
R3HDM1-213ENST00000463230 CPXCR1Q8N123 301 aa15.28■□□□□ 0.04
R3HDM1-213ENST00000463230 NPLOC4Q8TAT6 608 aa15.28■□□□□ 0.04
R3HDM1-213ENST00000463230 TMEM87BQ96K49 555 aa15.28■□□□□ 0.04
R3HDM1-213ENST00000463230 ACAD9Q9H845 621 aa15.28■□□□□ 0.04
R3HDM1-213ENST00000463230 GPCPD1Q9NPB8 672 aa15.28■□□□□ 0.04
R3HDM1-213ENST00000463230 KIAA0100Q14667 2235 aaKnown RBP15.28■□□□□ 0.04
R3HDM1-213ENST00000463230 COBLO75128 1261 aa15.28■□□□□ 0.04
R3HDM1-213ENST00000463230 PARP1P09874 1014 aaKnown RBP15.28■□□□□ 0.04
R3HDM1-213ENST00000463230 PRKAR2AP13861 404 aaKnown RBP15.28■□□□□ 0.04
R3HDM1-213ENST00000463230 MCM5P33992 734 aa15.28■□□□□ 0.04
R3HDM1-213ENST00000463230 WTAPQ15007 396 aa15.28■□□□□ 0.04
R3HDM1-213ENST00000463230 ZNF467Q7Z7K2 595 aaPredicted RBP15.28■□□□□ 0.04
R3HDM1-213ENST00000463230 TMTC2Q8N394 836 aa15.28■□□□□ 0.04
R3HDM1-213ENST00000463230 MTMR7Q9Y216 660 aa15.28■□□□□ 0.04
R3HDM1-213ENST00000463230 FRMPD2Q68DX3 1309 aaPredicted RBP15.27■□□□□ 0.04
R3HDM1-213ENST00000463230 SGPL1O95470 568 aa15.27■□□□□ 0.04
R3HDM1-213ENST00000463230 ZNF792Q3KQV3 632 aa15.27■□□□□ 0.04
R3HDM1-213ENST00000463230 TTBK2Q6IQ55 1244 aa15.27■□□□□ 0.04
R3HDM1-213ENST00000463230 MAP3K14Q99558 947 aa15.27■□□□□ 0.04
R3HDM1-213ENST00000463230 CRISPLD2Q9H0B8 497 aa15.27■□□□□ 0.04
R3HDM1-213ENST00000463230 RIPK3Q9Y572 518 aa15.27■□□□□ 0.04
R3HDM1-213ENST00000463230 TAF6LQ9Y6J9 622 aa15.27■□□□□ 0.04
R3HDM1-213ENST00000463230 PFASO15067 1338 aa15.27■□□□□ 0.03
R3HDM1-213ENST00000463230 DNAJC25-GNG10A0A024R161 153 aa15.27■□□□□ 0.03
R3HDM1-213ENST00000463230 MSCO60682 206 aa15.27■□□□□ 0.03
R3HDM1-213ENST00000463230 EIF5BO60841 1220 aaKnown RBP15.27■□□□□ 0.03
R3HDM1-213ENST00000463230 CACNB2Q08289 660 aaPredicted RBP15.27■□□□□ 0.03
R3HDM1-213ENST00000463230 CCL14Q16627 93 aa15.27■□□□□ 0.03
R3HDM1-213ENST00000463230 ANKLE1Q8NAG6 615 aa15.27■□□□□ 0.03
R3HDM1-213ENST00000463230 KCNB2Q92953 911 aa15.27■□□□□ 0.03
R3HDM1-213ENST00000463230 MAML3Q96JK9 1138 aa15.27■□□□□ 0.03
R3HDM1-213ENST00000463230 ANTXR2P58335 489 aa15.26■□□□□ 0.03
R3HDM1-213ENST00000463230 TMEM67Q5HYA8 995 aa15.26■□□□□ 0.03
R3HDM1-213ENST00000463230 RASGRP2Q7LDG7 609 aa15.26■□□□□ 0.03
R3HDM1-213ENST00000463230 IGDCC4Q8TDY8 1250 aa15.26■□□□□ 0.03
R3HDM1-213ENST00000463230 U2AF1L4Q8WU68 220 aaKnown RBP15.26■□□□□ 0.03
R3HDM1-213ENST00000463230 DDX11Q96FC9 970 aa15.26■□□□□ 0.03
R3HDM1-213ENST00000463230 RNF146Q9NTX7 359 aa15.26■□□□□ 0.03
R3HDM1-213ENST00000463230 CCPG1Q9ULG6 757 aa15.26■□□□□ 0.03
R3HDM1-213ENST00000463230 HTTP42858 3142 aa15.26■□□□□ 0.03
R3HDM1-213ENST00000463230 EN2P19622 333 aaPredicted RBP15.25■□□□□ 0.03
R3HDM1-213ENST00000463230 SLC16A2P36021 539 aa15.25■□□□□ 0.03
R3HDM1-213ENST00000463230 GRM4Q14833 912 aa15.25■□□□□ 0.03
R3HDM1-213ENST00000463230 CATIPQ7Z7H3 387 aa15.25■□□□□ 0.03
R3HDM1-213ENST00000463230 FLRT1Q9NZU1 646 aa15.25■□□□□ 0.03
R3HDM1-213ENST00000463230 PRC1O43663 620 aa15.25■□□□□ 0.03
R3HDM1-213ENST00000463230 DDAH1O94760 285 aa15.25■□□□□ 0.03
R3HDM1-213ENST00000463230 HMGB1P09429 215 aaKnown RBP15.25■□□□□ 0.03
R3HDM1-213ENST00000463230 LIFRP42702 1097 aa15.25■□□□□ 0.03
R3HDM1-213ENST00000463230 TRIM32Q13049 653 aa15.25■□□□□ 0.03
R3HDM1-213ENST00000463230 CCDC174Q6PII3 467 aa15.25■□□□□ 0.03
R3HDM1-213ENST00000463230 ANKRD35Q8N283 1001 aa15.25■□□□□ 0.03
R3HDM1-213ENST00000463230 SHISA4Q96DD7 197 aa15.25■□□□□ 0.03
R3HDM1-213ENST00000463230 AGBL1Q96MI9 1066 aa15.25■□□□□ 0.03
R3HDM1-213ENST00000463230 TRERF1Q96PN7 1200 aa15.25■□□□□ 0.03
R3HDM1-213ENST00000463230 SYNGAP1Q96PV0 1343 aa15.25■□□□□ 0.03
R3HDM1-213ENST00000463230 LOC102724159A0A0B4J2E5 919 aa15.24■□□□□ 0.03
R3HDM1-213ENST00000463230 MYCP01106 439 aaPredicted RBP15.24■□□□□ 0.03
R3HDM1-213ENST00000463230 CYBAP13498 195 aa15.24■□□□□ 0.03
R3HDM1-213ENST00000463230 TRAF1Q13077 416 aa15.24■□□□□ 0.03
R3HDM1-213ENST00000463230 PWP2Q15269 919 aaKnown RBP15.24■□□□□ 0.03
R3HDM1-213ENST00000463230 MAMDC4Q6UXC1 1216 aa15.24■□□□□ 0.03
R3HDM1-213ENST00000463230 DEFB118Q96PH6 123 aa15.24■□□□□ 0.03
R3HDM1-213ENST00000463230 PALM3A6NDB9 673 aaPredicted RBP15.24■□□□□ 0.03
R3HDM1-213ENST00000463230 ALAS1P13196 640 aa15.24■□□□□ 0.03
R3HDM1-213ENST00000463230 NEK1Q96PY6 1258 aa15.24■□□□□ 0.03
R3HDM1-213ENST00000463230 LY9Q9HBG7 655 aa15.24■□□□□ 0.03
R3HDM1-213ENST00000463230 SH2B2O14492 632 aaPredicted RBP15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 CALM1P0DP23 149 aa15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 CALM2P0DP24 149 aa15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 CALM3P0DP25 149 aa15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 HSPA4P34932 840 aa15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 TPRNQ4KMQ1 711 aa15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 TINF2Q9BSI4 451 aa15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 OGDHLQ9ULD0 1010 aa15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 FRMPD3Q5JV73 1810 aa15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 TFRCP02786 760 aaKnown RBP15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 PGK2P07205 417 aa15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 GOLGA8HP0CJ92 632 aa15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 SMARCA1P28370 1054 aa15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 KIF5BP33176 963 aa15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 TROAPQ12815 778 aa15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 ADGRF4Q8IZF3 695 aa15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 RGS22Q8NE09 1264 aa15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 CHMP4CQ96CF2 233 aa15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 A1CFQ9NQ94 594 aaKnown RBP15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 MAD2L2Q9UI95 211 aa15.23■□□□□ 0.03
R3HDM1-213ENST00000463230 ABCB11O95342 1321 aa15.22■□□□□ 0.03
R3HDM1-213ENST00000463230 KLRF2D3W0D1 207 aa15.22■□□□□ 0.03
R3HDM1-213ENST00000463230 POTEB2H3BUK9 544 aa15.22■□□□□ 0.03
R3HDM1-213ENST00000463230 CYP2C19P33261 490 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms