RNA–Protein interactions for RNA: ENST00000462998.1

PTPN23-203, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 3

Gene PTPN23, Length 260 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-203ENST00000462998 MSCO60682 206 aa12.93□□□□□ -0.34
PTPN23-203ENST00000462998 ALAS1P13196 640 aa12.93□□□□□ -0.34
PTPN23-203ENST00000462998 ZNF543Q08ER8 600 aa12.93□□□□□ -0.34
PTPN23-203ENST00000462998 TRDNQ13061 729 aa12.93□□□□□ -0.34
PTPN23-203ENST00000462998 PRAMEF19Q5SWL8 479 aa12.93□□□□□ -0.34
PTPN23-203ENST00000462998 DGKHQ86XP1 1220 aa12.93□□□□□ -0.34
PTPN23-203ENST00000462998 ENAHQ8N8S7 591 aaPredicted RBP12.93□□□□□ -0.34
PTPN23-203ENST00000462998 PNMA1Q8ND90 353 aa12.93□□□□□ -0.34
PTPN23-203ENST00000462998 ACAD9Q9H845 621 aa12.93□□□□□ -0.34
PTPN23-203ENST00000462998 RNF146Q9NTX7 359 aa12.93□□□□□ -0.34
PTPN23-203ENST00000462998 CCPG1Q9ULG6 757 aa12.93□□□□□ -0.34
PTPN23-203ENST00000462998 DIS3Q9Y2L1 958 aaKnown RBP12.93□□□□□ -0.34
PTPN23-203ENST00000462998 CYP21A2P08686 494 aa12.92□□□□□ -0.34
PTPN23-203ENST00000462998 TAL1P17542 331 aaPredicted RBP12.92□□□□□ -0.34
PTPN23-203ENST00000462998 TKFCQ3LXA3 575 aa12.92□□□□□ -0.34
PTPN23-203ENST00000462998 ANO1Q5XXA6 986 aa12.92□□□□□ -0.34
PTPN23-203ENST00000462998 BTNL9Q6UXG8 535 aa12.92□□□□□ -0.34
PTPN23-203ENST00000462998 DNAH12Q6ZR08 3092 aa12.92□□□□□ -0.34
PTPN23-203ENST00000462998 KIAA1211Q6ZU35 1233 aa12.92□□□□□ -0.34
PTPN23-203ENST00000462998 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTPN23-203ENST00000462998 TRERF1Q96PN7 1200 aa12.92□□□□□ -0.34
PTPN23-203ENST00000462998 TINF2Q9BSI4 451 aa12.92□□□□□ -0.34
PTPN23-203ENST00000462998 RANBP17Q9H2T7 1088 aaKnown RBP12.92□□□□□ -0.34
PTPN23-203ENST00000462998 C11orf49Q9H6J7 331 aa12.92□□□□□ -0.34
PTPN23-203ENST00000462998 DNAJC25-GNG10A0A024R161 153 aa12.91□□□□□ -0.34
PTPN23-203ENST00000462998 H0YGN5 161 aa12.91□□□□□ -0.34
PTPN23-203ENST00000462998 SEPT4O43236 478 aa12.91□□□□□ -0.34
PTPN23-203ENST00000462998 ICAM1P05362 532 aa12.91□□□□□ -0.34
PTPN23-203ENST00000462998 GOLGA8HP0CJ92 632 aa12.91□□□□□ -0.34
PTPN23-203ENST00000462998 SNHG28P0DPA3 235 aa12.91□□□□□ -0.34
PTPN23-203ENST00000462998 MNX1P50219 401 aaPredicted RBP12.91□□□□□ -0.34
PTPN23-203ENST00000462998 BMP2KLQ5H9B9 411 aa12.91□□□□□ -0.34
PTPN23-203ENST00000462998 IFIT1BQ5T764 474 aaKnown RBP12.91□□□□□ -0.34
PTPN23-203ENST00000462998 CYB5R4Q7L1T6 521 aa12.91□□□□□ -0.34
PTPN23-203ENST00000462998 RALYLQ86SE5 291 aaKnown RBP12.91□□□□□ -0.34
PTPN23-203ENST00000462998 ESYT1Q9BSJ8 1104 aa12.91□□□□□ -0.34
PTPN23-203ENST00000462998 CNPY2Q9Y2B0 182 aa12.91□□□□□ -0.34
PTPN23-203ENST00000462998 RBM8AQ9Y5S9 174 aaKnown RBP12.91□□□□□ -0.34
PTPN23-203ENST00000462998 TAF6LQ9Y6J9 622 aa12.91□□□□□ -0.34
PTPN23-203ENST00000462998 POTEB2H3BUK9 544 aa12.9□□□□□ -0.34
PTPN23-203ENST00000462998 EVI5O60447 810 aa12.9□□□□□ -0.34
PTPN23-203ENST00000462998 MYCNP04198 464 aaPredicted RBP12.9□□□□□ -0.34
PTPN23-203ENST00000462998 MUM1L1Q5H9M0 696 aa12.9□□□□□ -0.34
PTPN23-203ENST00000462998 GPATCH4Q5T3I0 446 aaKnown RBP12.9□□□□□ -0.34
PTPN23-203ENST00000462998 ANKS1AQ92625 1134 aa12.9□□□□□ -0.34
PTPN23-203ENST00000462998 MAP4K1Q92918 833 aa12.9□□□□□ -0.34
PTPN23-203ENST00000462998 A1CFQ9NQ94 594 aaKnown RBP12.9□□□□□ -0.34
PTPN23-203ENST00000462998 NRBP1Q9UHY1 535 aa12.9□□□□□ -0.34
PTPN23-203ENST00000462998 NR2E3Q9Y5X4 410 aa12.9□□□□□ -0.34
PTPN23-203ENST00000462998 PFASO15067 1338 aa12.89□□□□□ -0.35
PTPN23-203ENST00000462998 SYNGAP1Q96PV0 1343 aa12.89□□□□□ -0.35
PTPN23-203ENST00000462998 E7EWF7 191 aa12.89□□□□□ -0.35
PTPN23-203ENST00000462998 CNTN2Q02246 1040 aa12.89□□□□□ -0.35
PTPN23-203ENST00000462998 ASPRV1Q53RT3 343 aa12.89□□□□□ -0.35
PTPN23-203ENST00000462998 NSMFQ6X4W1 530 aa12.89□□□□□ -0.35
PTPN23-203ENST00000462998 ZNF467Q7Z7K2 595 aaPredicted RBP12.89□□□□□ -0.35
PTPN23-203ENST00000462998 MSL3Q8N5Y2 521 aaKnown RBP12.89□□□□□ -0.35
PTPN23-203ENST00000462998 UBA5Q9GZZ9 404 aa12.89□□□□□ -0.35
PTPN23-203ENST00000462998 LSG1Q9H089 658 aaKnown RBP12.89□□□□□ -0.35
PTPN23-203ENST00000462998 CPVLQ9H3G5 476 aa12.89□□□□□ -0.35
PTPN23-203ENST00000462998 ANO2Q9NQ90 1003 aa12.89□□□□□ -0.35
PTPN23-203ENST00000462998 ZHX1Q9UKY1 873 aaPredicted RBP12.89□□□□□ -0.35
PTPN23-203ENST00000462998 ALPK3Q96L96 1907 aa12.89□□□□□ -0.35
PTPN23-203ENST00000462998 ERICH2A1L162 156 aa12.88□□□□□ -0.35
PTPN23-203ENST00000462998 DNM1LO00429 736 aa12.88□□□□□ -0.35
PTPN23-203ENST00000462998 IFIT3O14879 490 aaKnown RBP12.88□□□□□ -0.35
PTPN23-203ENST00000462998 PARP1P09874 1014 aaKnown RBP12.88□□□□□ -0.35
PTPN23-203ENST00000462998 ZNF865P0CJ78 1059 aaPredicted RBP12.88□□□□□ -0.35
PTPN23-203ENST00000462998 RARBP10826 455 aa12.88□□□□□ -0.35
PTPN23-203ENST00000462998 SEC23AQ15436 765 aa12.88□□□□□ -0.35
PTPN23-203ENST00000462998 GJC2Q5T442 439 aaPredicted RBP12.88□□□□□ -0.35
PTPN23-203ENST00000462998 CASC1Q6TDU7 716 aa12.88□□□□□ -0.35
PTPN23-203ENST00000462998 MAMDC4Q6UXC1 1216 aa12.88□□□□□ -0.35
PTPN23-203ENST00000462998 STOX1Q6ZVD7 989 aa12.88□□□□□ -0.35
PTPN23-203ENST00000462998 C7orf61Q8IZ16 206 aa12.88□□□□□ -0.35
PTPN23-203ENST00000462998 ARRDC4Q8NCT1 418 aa12.88□□□□□ -0.35
PTPN23-203ENST00000462998 NCOA7Q8NI08 942 aa12.88□□□□□ -0.35
PTPN23-203ENST00000462998 FGD4Q96M96 766 aa12.88□□□□□ -0.35
PTPN23-203ENST00000462998 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.88□□□□□ -0.35
PTPN23-203ENST00000462998 KBTBD13C9JR72 458 aa12.87□□□□□ -0.35
PTPN23-203ENST00000462998 NFIBO00712 420 aa12.87□□□□□ -0.35
PTPN23-203ENST00000462998 DHX16O60231 1041 aaKnown RBP12.87□□□□□ -0.35
PTPN23-203ENST00000462998 SNAI1O95863 264 aaPredicted RBP12.87□□□□□ -0.35
PTPN23-203ENST00000462998 COL6A1P12109 1028 aa12.87□□□□□ -0.35
PTPN23-203ENST00000462998 AKR1A1P14550 325 aa12.87□□□□□ -0.35
PTPN23-203ENST00000462998 SART3Q15020 963 aaKnown RBP12.87□□□□□ -0.35
PTPN23-203ENST00000462998 CDC37Q16543 378 aaPredicted RBP12.87□□□□□ -0.35
PTPN23-203ENST00000462998 USH1GQ495M9 461 aa12.87□□□□□ -0.35
PTPN23-203ENST00000462998 ARMCX2Q7L311 632 aa12.87□□□□□ -0.35
PTPN23-203ENST00000462998 CHST3Q7LGC8 479 aa12.87□□□□□ -0.35
PTPN23-203ENST00000462998 CCDC144CPQ8IYA2 1237 aa12.87□□□□□ -0.35
PTPN23-203ENST00000462998 FAM133AQ8N9E0 248 aa12.87□□□□□ -0.35
PTPN23-203ENST00000462998 LENG1Q96BZ8 264 aaPredicted RBP12.87□□□□□ -0.35
PTPN23-203ENST00000462998 SENP6Q9GZR1 1112 aaPredicted RBP12.87□□□□□ -0.35
PTPN23-203ENST00000462998 XPNPEP3Q9NQH7 507 aa12.87□□□□□ -0.35
PTPN23-203ENST00000462998 CYP39A1Q9NYL5 469 aa12.87□□□□□ -0.35
PTPN23-203ENST00000462998 PNMA2Q9UL42 364 aa12.87□□□□□ -0.35
PTPN23-203ENST00000462998 MCM3APO60318 1980 aa12.87□□□□□ -0.35
PTPN23-203ENST00000462998 WDR19Q8NEZ3 1342 aa12.87□□□□□ -0.35
PTPN23-203ENST00000462998 SMCHD1A6NHR9 2005 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms