RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 LRRIQ3A6PVS8 624 aaPredicted RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 NUTM2EB1AL46 878 aaPredicted RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 B4DLN1 442 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 GOLGA8KD6RF30 607 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 OPA1O60313 960 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 N4BP1O75113 896 aaKnown RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 COBLO75128 1261 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 PHACTR2O75167 634 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 RHOBTB3O94955 611 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 FGFR1OPO95684 399 aaKnown RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 ATP1A1P05023 1023 aaKnown RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 FGRP09769 529 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 SRGNP10124 158 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 TRIM21P19474 475 aaKnown RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 CCNE1P24864 410 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 CDC25AP30304 524 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 HOXA7P31268 230 aaPredicted RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 UBA7P41226 1012 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 PRCPP42785 496 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 MTIF2P46199 727 aaKnown RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 VAV2P52735 878 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 ZBED6P86452 979 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 CDK17Q00537 523 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 AMPD3Q01432 767 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 CHRNDQ07001 517 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 TROAPQ12815 778 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 KIF5AQ12840 1032 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 NPY5RQ15761 445 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 CCDC96Q2M329 555 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 DNAJC21Q5F1R6 531 aaKnown RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 EARS2Q5JPH6 523 aaKnown RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 CCDC181Q5TID7 509 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 SUSD4Q5VX71 490 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 GALNT17Q6IS24 598 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 LRRC31Q6UY01 552 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 GBP6Q6ZN66 633 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 BRINP3Q76B58 766 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 ANKRD18AQ8IVF6 992 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 AMOTL1Q8IY63 956 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 MMGT1Q8N4V1 131 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 SRBD1Q8N5C6 995 aaKnown RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 CSGALNACT2Q8N6G5 542 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 CCDC155Q8N6L0 562 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 DAGLBQ8NCG7 672 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 TRIM58Q8NG06 486 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 IPO4Q8TEX9 1081 aaKnown RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 STAMQ92783 540 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 P2RX5Q93086 422 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 SHISA4Q96DD7 197 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 CAPZA3Q96KX2 299 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 CNOT6LQ96LI5 555 aaKnown RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 CCDC42Q96M95 316 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 AK8Q96MA6 479 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 ALS2CR12Q96Q35 445 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 MMS19Q96T76 1030 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 CHP1Q99653 195 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 RIOK1Q9BRS2 568 aaKnown RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 SELENOOQ9BVL4 669 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 NHEJ1Q9H9Q4 299 aaPredicted RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 SUGCTQ9HAC7 445 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 JADE2Q9NQC1 790 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 TCP11L1Q9NUJ3 509 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 CCDC87Q9NVE4 849 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 ARPP21Q9UBL0 812 aaPredicted RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 RSPH14Q9UHP6 348 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 PCDHA4Q9UN74 947 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 ZNF652Q9Y2D9 606 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 REXO2Q9Y3B8 237 aaKnown RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 JRKLQ9Y4A0 524 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 HYOU1Q9Y4L1 999 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 COL18A1P39060 1754 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 BCL9O00512 1426 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 AFDNP55196 1824 aaKnown RBP3.93□□□□□ -1.78
COL8A1-204ENST00000462604 CYP2D7A0A087X1C5 515 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 MACROD2A1Z1Q3 448 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 TRIM49BA6NDI0 452 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 GOLGA6CA6NDK9 693 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 A6NNZ2 444 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 VGLL3A8MV65 326 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 SNAP23O00161 211 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 WNT7AO00755 349 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 ENC1O14682 589 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 SHOX2O60902 331 aaPredicted RBP3.92□□□□□ -1.78
COL8A1-204ENST00000462604 HSF2BPO75031 334 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 KIAA0754O94854 1291 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 CLSTN1O94985 981 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 NTSR2O95665 410 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 SYF2O95926 243 aaKnown RBP3.92□□□□□ -1.78
COL8A1-204ENST00000462604 GOLGA6DP0CG33 693 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 IDEP14735 1019 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 TCP1P17987 556 aaKnown RBP3.92□□□□□ -1.78
COL8A1-204ENST00000462604 PRPHP41219 470 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 PAFAH1B1P43034 410 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 EPHB4P54760 987 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 CORO7P57737 925 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 DYNLL1P63167 89 aaKnown RBP3.92□□□□□ -1.78
COL8A1-204ENST00000462604 ASIC1P78348 528 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 APBA1Q02410 837 aa3.92□□□□□ -1.78
COL8A1-204ENST00000462604 ITIH3Q06033 890 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms