RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 EN2P19622 333 aaPredicted RBP18.54■□□□□ 0.56
ERCC3-206ENST00000462306 MCM5P33992 734 aa18.54■□□□□ 0.56
ERCC3-206ENST00000462306 WTAPQ15007 396 aa18.54■□□□□ 0.56
ERCC3-206ENST00000462306 ASPRV1Q53RT3 343 aa18.54■□□□□ 0.56
ERCC3-206ENST00000462306 TMEM67Q5HYA8 995 aa18.54■□□□□ 0.56
ERCC3-206ENST00000462306 UBA5Q9GZZ9 404 aa18.54■□□□□ 0.56
ERCC3-206ENST00000462306 CPVLQ9H3G5 476 aa18.54■□□□□ 0.56
ERCC3-206ENST00000462306 GPHNQ9NQX3 736 aaPredicted RBP18.54■□□□□ 0.56
ERCC3-206ENST00000462306 RPTORQ8N122 1335 aa18.53■□□□□ 0.56
ERCC3-206ENST00000462306 REC8O95072 547 aa18.53■□□□□ 0.56
ERCC3-206ENST00000462306 ICAM1P05362 532 aa18.53■□□□□ 0.56
ERCC3-206ENST00000462306 PGK2P07205 417 aa18.53■□□□□ 0.56
ERCC3-206ENST00000462306 PARP1P09874 1014 aaKnown RBP18.53■□□□□ 0.56
ERCC3-206ENST00000462306 PRKAR2AP13861 404 aaKnown RBP18.53■□□□□ 0.56
ERCC3-206ENST00000462306 CACNB2Q08289 660 aaPredicted RBP18.53■□□□□ 0.56
ERCC3-206ENST00000462306 TKFCQ3LXA3 575 aa18.53■□□□□ 0.56
ERCC3-206ENST00000462306 OLFML2BQ68BL8 750 aa18.53■□□□□ 0.56
ERCC3-206ENST00000462306 STAG2Q8N3U4 1231 aa18.53■□□□□ 0.56
ERCC3-206ENST00000462306 LY9Q9HBG7 655 aa18.53■□□□□ 0.56
ERCC3-206ENST00000462306 PAK6Q9NQU5 681 aaPredicted RBP18.53■□□□□ 0.56
ERCC3-206ENST00000462306 HOMER2Q9NSB8 354 aa18.53■□□□□ 0.56
ERCC3-206ENST00000462306 SLC5A4Q9NY91 659 aa18.53■□□□□ 0.56
ERCC3-206ENST00000462306 FBXO40Q9UH90 709 aa18.53■□□□□ 0.56
ERCC3-206ENST00000462306 ZNFX1Q9P2E3 1918 aaKnown RBP18.53■□□□□ 0.56
ERCC3-206ENST00000462306 DNAJC25-GNG10A0A024R161 153 aa18.52■□□□□ 0.56
ERCC3-206ENST00000462306 TAL1P17542 331 aaPredicted RBP18.52■□□□□ 0.56
ERCC3-206ENST00000462306 HSPA4P34932 840 aa18.52■□□□□ 0.56
ERCC3-206ENST00000462306 TROAPQ12815 778 aa18.52■□□□□ 0.56
ERCC3-206ENST00000462306 ZNF792Q3KQV3 632 aa18.52■□□□□ 0.56
ERCC3-206ENST00000462306 ADCK5Q3MIX3 580 aa18.52■□□□□ 0.56
ERCC3-206ENST00000462306 MAML3Q96JK9 1138 aa18.52■□□□□ 0.56
ERCC3-206ENST00000462306 TMEM87BQ96K49 555 aa18.52■□□□□ 0.56
ERCC3-206ENST00000462306 TRERF1Q96PN7 1200 aa18.52■□□□□ 0.56
ERCC3-206ENST00000462306 NEK1Q96PY6 1258 aa18.52■□□□□ 0.56
ERCC3-206ENST00000462306 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.52■□□□□ 0.56
ERCC3-206ENST00000462306 HMX1Q9NP08 348 aaPredicted RBP18.52■□□□□ 0.56
ERCC3-206ENST00000462306 RNF146Q9NTX7 359 aa18.52■□□□□ 0.56
ERCC3-206ENST00000462306 MAD2L2Q9UI95 211 aa18.52■□□□□ 0.56
ERCC3-206ENST00000462306 CCPG1Q9ULG6 757 aa18.52■□□□□ 0.56
ERCC3-206ENST00000462306 BRCA2P51587 3418 aa18.52■□□□□ 0.55
ERCC3-206ENST00000462306 PALM3A6NDB9 673 aaPredicted RBP18.51■□□□□ 0.55
ERCC3-206ENST00000462306 SH2B2O14492 632 aaPredicted RBP18.51■□□□□ 0.55
ERCC3-206ENST00000462306 EPB41L2O43491 1005 aaKnown RBP18.51■□□□□ 0.55
ERCC3-206ENST00000462306 ALAS1P13196 640 aa18.51■□□□□ 0.55
ERCC3-206ENST00000462306 CYP2C19P33261 490 aa18.51■□□□□ 0.55
ERCC3-206ENST00000462306 GJA8P48165 433 aa18.51■□□□□ 0.55
ERCC3-206ENST00000462306 GRM4Q14833 912 aa18.51■□□□□ 0.55
ERCC3-206ENST00000462306 MFSD14CQ5VZR4 134 aa18.51■□□□□ 0.55
ERCC3-206ENST00000462306 ADGRF4Q8IZF3 695 aa18.51■□□□□ 0.55
ERCC3-206ENST00000462306 SHISA4Q96DD7 197 aa18.51■□□□□ 0.55
ERCC3-206ENST00000462306 ACAD9Q9H845 621 aa18.51■□□□□ 0.55
ERCC3-206ENST00000462306 DIS3Q9Y2L1 958 aaKnown RBP18.51■□□□□ 0.55
ERCC3-206ENST00000462306 EXOSC10Q01780 885 aaKnown RBP18.5■□□□□ 0.55
ERCC3-206ENST00000462306 KRT32Q14532 448 aa18.5■□□□□ 0.55
ERCC3-206ENST00000462306 MUM1L1Q5H9M0 696 aa18.5■□□□□ 0.55
ERCC3-206ENST00000462306 ANKRD35Q8N283 1001 aa18.5■□□□□ 0.55
ERCC3-206ENST00000462306 U2AF1L4Q8WU68 220 aaKnown RBP18.5■□□□□ 0.55
ERCC3-206ENST00000462306 DDX11Q96FC9 970 aa18.5■□□□□ 0.55
ERCC3-206ENST00000462306 DEFB118Q96PH6 123 aa18.5■□□□□ 0.55
ERCC3-206ENST00000462306 WDR19Q8NEZ3 1342 aa18.49■□□□□ 0.55
ERCC3-206ENST00000462306 SMCHD1A6NHR9 2005 aa18.49■□□□□ 0.55
ERCC3-206ENST00000462306 KLRF2D3W0D1 207 aa18.49■□□□□ 0.55
ERCC3-206ENST00000462306 SGPL1O95470 568 aa18.49■□□□□ 0.55
ERCC3-206ENST00000462306 CCND3P30281 292 aaPredicted RBP18.49■□□□□ 0.55
ERCC3-206ENST00000462306 LIFRP42702 1097 aa18.49■□□□□ 0.55
ERCC3-206ENST00000462306 SLC35G1Q2M3R5 365 aa18.49■□□□□ 0.55
ERCC3-206ENST00000462306 CATIPQ7Z7H3 387 aa18.49■□□□□ 0.55
ERCC3-206ENST00000462306 TMTC2Q8N394 836 aa18.49■□□□□ 0.55
ERCC3-206ENST00000462306 USP26Q9BXU7 913 aa18.49■□□□□ 0.55
ERCC3-206ENST00000462306 LRRC2Q9BYS8 371 aa18.49■□□□□ 0.55
ERCC3-206ENST00000462306 JMJD4Q9H9V9 463 aa18.49■□□□□ 0.55
ERCC3-206ENST00000462306 A1CFQ9NQ94 594 aaKnown RBP18.49■□□□□ 0.55
ERCC3-206ENST00000462306 SNX14Q9Y5W7 946 aa18.49■□□□□ 0.55
ERCC3-206ENST00000462306 CDC37Q16543 378 aaPredicted RBP18.48■□□□□ 0.55
ERCC3-206ENST00000462306 DHX32Q7L7V1 743 aaKnown RBP18.48■□□□□ 0.55
ERCC3-206ENST00000462306 ZNF654Q8IZM8 581 aa18.48■□□□□ 0.55
ERCC3-206ENST00000462306 TRPV1Q8NER1 839 aa18.48■□□□□ 0.55
ERCC3-206ENST00000462306 FGD4Q96M96 766 aa18.48■□□□□ 0.55
ERCC3-206ENST00000462306 MAP3K14Q99558 947 aa18.48■□□□□ 0.55
ERCC3-206ENST00000462306 CRISPLD2Q9H0B8 497 aa18.48■□□□□ 0.55
ERCC3-206ENST00000462306 PNMA2Q9UL42 364 aa18.48■□□□□ 0.55
ERCC3-206ENST00000462306 PLXNA1Q9UIW2 1896 aa18.48■□□□□ 0.55
ERCC3-206ENST00000462306 DDAH1O94760 285 aa18.47■□□□□ 0.55
ERCC3-206ENST00000462306 CYBAP13498 195 aa18.47■□□□□ 0.55
ERCC3-206ENST00000462306 MLLT1Q03111 559 aaPredicted RBP18.47■□□□□ 0.55
ERCC3-206ENST00000462306 SGMS1Q86VZ5 419 aa18.47■□□□□ 0.55
ERCC3-206ENST00000462306 FAM133AQ8N9E0 248 aa18.47■□□□□ 0.55
ERCC3-206ENST00000462306 CLEC4DQ8WXI8 215 aa18.47■□□□□ 0.55
ERCC3-206ENST00000462306 MTMR8Q96EF0 704 aa18.47■□□□□ 0.55
ERCC3-206ENST00000462306 TCEANC2Q96MN5 208 aa18.47■□□□□ 0.55
ERCC3-206ENST00000462306 TINF2Q9BSI4 451 aa18.47■□□□□ 0.55
ERCC3-206ENST00000462306 MYL10Q9BUA6 226 aa18.47■□□□□ 0.55
ERCC3-206ENST00000462306 VAT1LQ9HCJ6 419 aa18.47■□□□□ 0.55
ERCC3-206ENST00000462306 CCDC69A6NI79 296 aa18.46■□□□□ 0.55
ERCC3-206ENST00000462306 NFIBO00712 420 aa18.46■□□□□ 0.55
ERCC3-206ENST00000462306 HMGB1P09429 215 aaKnown RBP18.46■□□□□ 0.55
ERCC3-206ENST00000462306 CNTN2Q02246 1040 aa18.46■□□□□ 0.55
ERCC3-206ENST00000462306 QRICH1Q2TAL8 776 aa18.46■□□□□ 0.55
ERCC3-206ENST00000462306 MAMDC4Q6UXC1 1216 aa18.46■□□□□ 0.55
ERCC3-206ENST00000462306 NFXL1Q6ZNB6 911 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms