RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 RSPH3Q86UC2 560 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 CD99L2Q8TCZ2 262 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 MTIF3Q9H2K0 278 aaKnown RBP10.54□□□□□ -0.72
DDX39B-215ENST00000462256 FBXO28Q9NVF7 368 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 RFX7Q2KHR2 1363 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 STRNO43815 780 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 CCND2P30279 289 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 TTLL4Q14679 1199 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 NONOQ15233 471 aaKnown RBP eCLIP10.54□□□□□ -0.72
DDX39B-215ENST00000462256 KRT25Q7Z3Z0 450 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 CMTR1Q8N1G2 835 aaKnown RBP10.54□□□□□ -0.72
DDX39B-215ENST00000462256 CHST13Q8NET6 341 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 CALML4Q96GE6 196 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 CCDC39Q9UFE4 941 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 C4AP0C0L4 1744 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 TLR3O15455 904 aaKnown RBP10.54□□□□□ -0.72
DDX39B-215ENST00000462256 DNM2P50570 870 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 ADGRA1Q86SQ6 560 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 RNF180Q86T96 592 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 TRMT44Q8IYL2 757 aaKnown RBP10.54□□□□□ -0.72
DDX39B-215ENST00000462256 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.54□□□□□ -0.721e-34■■□□□ 12.6
DDX39B-215ENST00000462256 USP26Q9BXU7 913 aa10.54□□□□□ -0.72
DDX39B-215ENST00000462256 NCOA5Q9HCD5 579 aaKnown RBP10.54□□□□□ -0.72
DDX39B-215ENST00000462256 EPB41L2O43491 1005 aaKnown RBP10.53□□□□□ -0.72
DDX39B-215ENST00000462256 MYL3P08590 195 aa10.53□□□□□ -0.72
DDX39B-215ENST00000462256 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.53□□□□□ -0.72
DDX39B-215ENST00000462256 ANKRD23Q86SG2 305 aa10.53□□□□□ -0.72
DDX39B-215ENST00000462256 TBC1D10CQ8IV04 446 aa10.53□□□□□ -0.72
DDX39B-215ENST00000462256 PHKBQ93100 1093 aa10.53□□□□□ -0.72
DDX39B-215ENST00000462256 RTEL1Q9NZ71 1219 aa10.53□□□□□ -0.72
DDX39B-215ENST00000462256 ABCB11O95342 1321 aa10.53□□□□□ -0.72
DDX39B-215ENST00000462256 PNMA6FA0A0J9YX94 578 aa10.53□□□□□ -0.72
DDX39B-215ENST00000462256 NKX2-3Q8TAU0 364 aa10.53□□□□□ -0.72
DDX39B-215ENST00000462256 SYAP1Q96A49 352 aaPredicted RBP10.53□□□□□ -0.72
DDX39B-215ENST00000462256 WDR18Q9BV38 432 aa10.53□□□□□ -0.72
DDX39B-215ENST00000462256 AK2P54819 239 aa10.53□□□□□ -0.72
DDX39B-215ENST00000462256 IFNL1Q8IU54 200 aa10.53□□□□□ -0.72
DDX39B-215ENST00000462256 GLT1D1Q96MS3 346 aa10.53□□□□□ -0.72
DDX39B-215ENST00000462256 SPATC1LQ9H0A9 340 aa10.53□□□□□ -0.72
DDX39B-215ENST00000462256 CFAP45Q9UL16 551 aa10.53□□□□□ -0.72
DDX39B-215ENST00000462256 HSPA4P34932 840 aa10.52□□□□□ -0.72
DDX39B-215ENST00000462256 ADD1P35611 737 aaKnown RBP10.52□□□□□ -0.72
DDX39B-215ENST00000462256 PANK2Q9BZ23 570 aa10.52□□□□□ -0.72
DDX39B-215ENST00000462256 USP54Q70EL1 1684 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 ZBTB5O15062 677 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 GAS7O60861 476 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 BMP15O95972 392 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 CHGBP05060 677 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 SCG2P13521 617 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 SHMT1P34896 483 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 PRMT2P55345 433 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 PLA2G4DQ86XP0 818 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 GPKOWQ92917 476 aaPredicted RBP eCLIP10.52□□□□□ -0.73
DDX39B-215ENST00000462256 TCHPQ9BT92 498 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 HTATIP2Q9BUP3 242 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 ZNF215Q9UL58 517 aaPredicted RBP10.52□□□□□ -0.73
DDX39B-215ENST00000462256 DYNC1LI2O43237 492 aaPredicted RBP10.52□□□□□ -0.73
DDX39B-215ENST00000462256 LIFRP42702 1097 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 ERVK-9P63128 1117 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 ERVK-24P63145 666 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 APOA5Q6Q788 366 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 ENAHQ8N8S7 591 aaPredicted RBP10.52□□□□□ -0.73
DDX39B-215ENST00000462256 FAM184BQ9ULE4 1060 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 PPP1R9AQ9ULJ8 1098 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 PRR12Q9ULL5 1215 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 ITGB4P16144 1822 aa10.52□□□□□ -0.73
DDX39B-215ENST00000462256 SLC10A3P09131 477 aa10.51□□□□□ -0.73
DDX39B-215ENST00000462256 GRK4P32298 578 aa10.51□□□□□ -0.73
DDX39B-215ENST00000462256 BAATQ14032 418 aaPredicted RBP10.51□□□□□ -0.73
DDX39B-215ENST00000462256 GNASQ5JWF2 1037 aa10.51□□□□□ -0.73
DDX39B-215ENST00000462256 RASAL3Q86YV0 1011 aa10.51□□□□□ -0.73
DDX39B-215ENST00000462256 MAP7D2Q96T17 732 aa10.51□□□□□ -0.73
DDX39B-215ENST00000462256 TM6SF1Q9BZW5 370 aa10.51□□□□□ -0.73
DDX39B-215ENST00000462256 CPVLQ9H3G5 476 aa10.51□□□□□ -0.73
DDX39B-215ENST00000462256 EPB41L4AQ9HCS5 686 aaPredicted RBP10.51□□□□□ -0.73
DDX39B-215ENST00000462256 XRCC6P12956 609 aaKnown RBP eCLIP10.51□□□□□ -0.731e-69■□□□□ 8.2
DDX39B-215ENST00000462256 HOXA13P31271 388 aaPredicted RBP10.51□□□□□ -0.73
DDX39B-215ENST00000462256 FLT3LGP49771 235 aa10.51□□□□□ -0.73
DDX39B-215ENST00000462256 KRT85P78386 507 aa10.51□□□□□ -0.73
DDX39B-215ENST00000462256 MAP3K11Q16584 847 aa10.51□□□□□ -0.73
DDX39B-215ENST00000462256 QRICH1Q2TAL8 776 aa10.51□□□□□ -0.73
DDX39B-215ENST00000462256 KRT79Q5XKE5 535 aa10.51□□□□□ -0.73
DDX39B-215ENST00000462256 LSG1Q9H089 658 aaKnown RBP10.51□□□□□ -0.73
DDX39B-215ENST00000462256 VPS54Q9P1Q0 977 aa10.51□□□□□ -0.73
DDX39B-215ENST00000462256 PFASO15067 1338 aa10.51□□□□□ -0.73
DDX39B-215ENST00000462256 ZNF543Q08ER8 600 aa10.51□□□□□ -0.73
DDX39B-215ENST00000462256 CRHR2Q13324 411 aa10.51□□□□□ -0.73
DDX39B-215ENST00000462256 Q3C1V9 767 aa10.51□□□□□ -0.73
DDX39B-215ENST00000462256 TMOD1P28289 359 aa10.5□□□□□ -0.73
DDX39B-215ENST00000462256 PRR16Q569H4 304 aa10.5□□□□□ -0.73
DDX39B-215ENST00000462256 SPOUT1Q5T280 376 aaKnown RBP10.5□□□□□ -0.73
DDX39B-215ENST00000462256 FAM160B1Q5W0V3 765 aa10.5□□□□□ -0.73
DDX39B-215ENST00000462256 METTL13Q8N6R0 699 aa10.5□□□□□ -0.73
DDX39B-215ENST00000462256 FTOQ9C0B1 505 aaKnown RBP eCLIP10.5□□□□□ -0.73
DDX39B-215ENST00000462256 ZBBXA8MT70 800 aa10.5□□□□□ -0.73
DDX39B-215ENST00000462256 FIBPO43427 364 aa10.5□□□□□ -0.73
DDX39B-215ENST00000462256 C5P01031 1676 aa10.5□□□□□ -0.73
DDX39B-215ENST00000462256 TPM2P07951 284 aa10.5□□□□□ -0.73
DDX39B-215ENST00000462256 NEDD4P46934 1319 aa10.5□□□□□ -0.73
DDX39B-215ENST00000462256 TPM4P67936 248 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms