RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 ADAMTSL1Q8N6G6 1762 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 GPR75-ASB3A0A0A6YYF3 556 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 IVLP07476 585 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 PDIA3P30101 505 aaKnown RBP9.56□□□□□ -0.88
HDAC9-219ENST00000461159 TPM4P67936 248 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 GSTO1P78417 241 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 CRYMQ14894 314 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 TSNAXIP1Q2TAA8 658 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 STRIP1Q5VSL9 837 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 HHATQ5VTY9 493 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 MYLK4Q86YV6 388 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-219ENST00000461159 ZFPM1Q8IX07 1006 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 PLEKHG4BQ96PX9 1271 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 USP40Q9NVE5 1235 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 FAM196BA6NMK8 535 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 POLR3DP05423 398 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-219ENST00000461159 LDHCP07864 332 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 GCFC2P16383 781 aaKnown RBP9.56□□□□□ -0.88
HDAC9-219ENST00000461159 CRKP46108 304 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 APOBEC3HQ6NTF7 200 aaKnown RBP9.56□□□□□ -0.88
HDAC9-219ENST00000461159 CCDC82Q8N4S0 544 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 AOPEPQ8N6M6 819 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 SMARCC2Q8TAQ2 1214 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 HPS5Q9UPZ3 1129 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 PPME1Q9Y570 386 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 CD2APQ9Y5K6 639 aa9.56□□□□□ -0.88
HDAC9-219ENST00000461159 ZMYM6O95789 1325 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 KLF18A0A0U1RQI7 1052 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 CLRN2A0PK11 232 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 PFKFB2O60825 505 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 RDXP35241 583 aaKnown RBP9.55□□□□□ -0.88
HDAC9-219ENST00000461159 IARSP41252 1262 aaKnown RBP9.55□□□□□ -0.88
HDAC9-219ENST00000461159 KCNJ6P48051 423 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 CXCL9Q07325 125 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 MICU3Q86XE3 530 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 CMTR1Q8N1G2 835 aaKnown RBP9.55□□□□□ -0.88
HDAC9-219ENST00000461159 FBXL16Q8N461 479 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 FSIP1Q8NA03 581 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 IGDCC4Q8TDY8 1250 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 TEKT1Q969V4 418 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 GOLPH3LQ9H4A5 285 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 TDRD3Q9H7E2 651 aaKnown RBP9.55□□□□□ -0.88
HDAC9-219ENST00000461159 L2HGDHQ9H9P8 463 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 SLC24A3Q9HC58 644 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 MKRN1Q9UHC7 482 aaKnown RBP9.55□□□□□ -0.88
HDAC9-219ENST00000461159 FLT1P17948 1338 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 UBE2Q2LH0YL09 131 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 IFIT3O14879 490 aaKnown RBP9.55□□□□□ -0.88
HDAC9-219ENST00000461159 ELF1P32519 619 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 ADD1P35611 737 aaKnown RBP9.55□□□□□ -0.88
HDAC9-219ENST00000461159 ME1P48163 572 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 TMEM67Q5HYA8 995 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 CDC42EP5Q6NZY7 148 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 C16orf87Q6PH81 154 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 NIM1KQ8IY84 436 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 NEK11Q8NG66 645 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 SMCR8Q8TEV9 937 aaPredicted RBP9.55□□□□□ -0.88
HDAC9-219ENST00000461159 PRMT6Q96LA8 375 aaPredicted RBP9.55□□□□□ -0.88
HDAC9-219ENST00000461159 ATP8A2Q9NTI2 1148 aa9.55□□□□□ -0.88
HDAC9-219ENST00000461159 WDHD1O75717 1129 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-219ENST00000461159 EGFRP00533 1210 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 SFPQP23246 707 aaKnown RBP eCLIP9.54□□□□□ -0.88
HDAC9-219ENST00000461159 PPP4CP60510 307 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 ARHGAP27Q6ZUM4 889 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 PRPF38AQ8NAV1 312 aaKnown RBP9.54□□□□□ -0.88
HDAC9-219ENST00000461159 PHC3Q8NDX5 983 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 SUPT20HQ8NEM7 779 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 ENGASEQ8NFI3 743 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 SDF4Q9BRK5 362 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 GJB4Q9NTQ9 266 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 ARGLU1Q9NWB6 273 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-219ENST00000461159 PSD3Q9NYI0 1048 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 GJA3Q9Y6H8 435 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 GAKO14976 1311 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 GOLGA8BA8MQT2 603 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 H2AFXP16104 143 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-219ENST00000461159 PECAM1P16284 738 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-219ENST00000461159 NEDD9Q14511 834 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 FILIP1LQ4L180 1135 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 KLHL10Q6JEL2 608 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 IQCF2Q8IXL9 164 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 NSUN7Q8NE18 718 aaKnown RBP9.54□□□□□ -0.88
HDAC9-219ENST00000461159 JDP2Q8WYK2 163 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 MRPS27Q92552 414 aaKnown RBP9.54□□□□□ -0.88
HDAC9-219ENST00000461159 CCDC34Q96HJ3 373 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 USP28Q96RU2 1077 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 BAG1Q99933 345 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-219ENST00000461159 SYT17Q9BSW7 474 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 POLR3CQ9BUI4 534 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-219ENST00000461159 CDK5RAP2Q96SN8 1893 aa9.54□□□□□ -0.88
HDAC9-219ENST00000461159 WDR19Q8NEZ3 1342 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 PTPDC1A2A3K4 754 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 SH2B2O14492 632 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-219ENST00000461159 MARCH6O60337 910 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 FLT3P36888 993 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 CORO7P57737 925 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 CFAP100Q494V2 611 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 C12orf60Q5U649 245 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 TAX1BP1Q86VP1 789 aa9.53□□□□□ -0.88
HDAC9-219ENST00000461159 SAMD3Q8N6K7 520 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms