RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-216ENST00000460957 RIPK3Q9Y572 518 aa18.61■□□□□ 0.57
GGA1-216ENST00000460957 PLXNA1Q9UIW2 1896 aa18.6■□□□□ 0.57
GGA1-216ENST00000460957 FARP2O94887 1054 aaPredicted RBP18.6■□□□□ 0.57
GGA1-216ENST00000460957 PARP1P09874 1014 aaKnown RBP18.6■□□□□ 0.57
GGA1-216ENST00000460957 GOLGA8HP0CJ92 632 aa18.6■□□□□ 0.57
GGA1-216ENST00000460957 WTAPQ15007 396 aa18.6■□□□□ 0.57
GGA1-216ENST00000460957 ASPRV1Q53RT3 343 aa18.6■□□□□ 0.57
GGA1-216ENST00000460957 CYB5R4Q7L1T6 521 aa18.6■□□□□ 0.57
GGA1-216ENST00000460957 AGBL1Q96MI9 1066 aa18.6■□□□□ 0.57
GGA1-216ENST00000460957 TRERF1Q96PN7 1200 aa18.6■□□□□ 0.57
GGA1-216ENST00000460957 PNMA2Q9UL42 364 aa18.6■□□□□ 0.57
GGA1-216ENST00000460957 CCND3P30281 292 aaPredicted RBP18.59■□□□□ 0.57
GGA1-216ENST00000460957 MAP3K21Q5TCX8 1036 aa18.59■□□□□ 0.57
GGA1-216ENST00000460957 BTNL9Q6UXG8 535 aa18.59■□□□□ 0.57
GGA1-216ENST00000460957 ANKS1AQ92625 1134 aa18.59■□□□□ 0.57
GGA1-216ENST00000460957 MAML3Q96JK9 1138 aa18.59■□□□□ 0.57
GGA1-216ENST00000460957 DIS3Q9Y2L1 958 aaKnown RBP18.59■□□□□ 0.57
GGA1-216ENST00000460957 HTTP42858 3142 aa18.58■□□□□ 0.57
GGA1-216ENST00000460957 SLC27A2O14975 620 aa18.58■□□□□ 0.56
GGA1-216ENST00000460957 MSCO60682 206 aa18.58■□□□□ 0.56
GGA1-216ENST00000460957 ICAM1P05362 532 aa18.58■□□□□ 0.56
GGA1-216ENST00000460957 TMEM67Q5HYA8 995 aa18.58■□□□□ 0.56
GGA1-216ENST00000460957 CREB3L3Q68CJ9 461 aa18.58■□□□□ 0.56
GGA1-216ENST00000460957 CHST3Q7LGC8 479 aa18.58■□□□□ 0.56
GGA1-216ENST00000460957 SHISA4Q96DD7 197 aa18.58■□□□□ 0.56
GGA1-216ENST00000460957 RANBP17Q9H2T7 1088 aaKnown RBP18.58■□□□□ 0.56
GGA1-216ENST00000460957 CNPY2Q9Y2B0 182 aa18.58■□□□□ 0.56
GGA1-216ENST00000460957 SNHG28P0DPA3 235 aa18.57■□□□□ 0.56
GGA1-216ENST00000460957 NSMFQ6X4W1 530 aa18.57■□□□□ 0.56
GGA1-216ENST00000460957 NFXL1Q6ZNB6 911 aa18.57■□□□□ 0.56
GGA1-216ENST00000460957 HTATIP2Q9BUP3 242 aa18.57■□□□□ 0.56
GGA1-216ENST00000460957 UBA5Q9GZZ9 404 aa18.57■□□□□ 0.56
GGA1-216ENST00000460957 PFASO15067 1338 aa18.56■□□□□ 0.56
GGA1-216ENST00000460957 ZNF536O15090 1300 aa18.56■□□□□ 0.56
GGA1-216ENST00000460957 POTEB2H3BUK9 544 aa18.56■□□□□ 0.56
GGA1-216ENST00000460957 MCM5P33992 734 aa18.56■□□□□ 0.56
GGA1-216ENST00000460957 ZNF792Q3KQV3 632 aa18.56■□□□□ 0.56
GGA1-216ENST00000460957 STOX1Q6ZVD7 989 aa18.56■□□□□ 0.56
GGA1-216ENST00000460957 CATIPQ7Z7H3 387 aa18.56■□□□□ 0.56
GGA1-216ENST00000460957 DPF3Q92784 378 aa18.56■□□□□ 0.56
GGA1-216ENST00000460957 TINF2Q9BSI4 451 aa18.56■□□□□ 0.56
GGA1-216ENST00000460957 VAT1LQ9HCJ6 419 aa18.56■□□□□ 0.56
GGA1-216ENST00000460957 DDX20Q9UHI6 824 aaKnown RBP18.56■□□□□ 0.56
GGA1-216ENST00000460957 PRC1O43663 620 aa18.55■□□□□ 0.56
GGA1-216ENST00000460957 MYCNP04198 464 aaPredicted RBP18.55■□□□□ 0.56
GGA1-216ENST00000460957 SEC23AQ15436 765 aa18.55■□□□□ 0.56
GGA1-216ENST00000460957 NECAB2Q7Z6G3 386 aa18.55■□□□□ 0.56
GGA1-216ENST00000460957 ANKLE1Q8NAG6 615 aa18.55■□□□□ 0.56
GGA1-216ENST00000460957 CRISPLD2Q9H0B8 497 aa18.55■□□□□ 0.56
GGA1-216ENST00000460957 TAF6LQ9Y6J9 622 aa18.55■□□□□ 0.56
GGA1-216ENST00000460957 PTPDC1A2A3K4 754 aa18.54■□□□□ 0.56
GGA1-216ENST00000460957 CCDC69A6NI79 296 aa18.54■□□□□ 0.56
GGA1-216ENST00000460957 REC8O95072 547 aa18.54■□□□□ 0.56
GGA1-216ENST00000460957 CYBAP13498 195 aa18.54■□□□□ 0.56
GGA1-216ENST00000460957 NECTIN1Q15223 517 aa18.54■□□□□ 0.56
GGA1-216ENST00000460957 CDC37Q16543 378 aaPredicted RBP18.54■□□□□ 0.56
GGA1-216ENST00000460957 USH1GQ495M9 461 aa18.54■□□□□ 0.56
GGA1-216ENST00000460957 PRAMEF19Q5SWL8 479 aa18.54■□□□□ 0.56
GGA1-216ENST00000460957 MB21D2Q8IYB1 491 aaPredicted RBP18.54■□□□□ 0.56
GGA1-216ENST00000460957 MSL3Q8N5Y2 521 aaKnown RBP18.54■□□□□ 0.56
GGA1-216ENST00000460957 NUP133Q8WUM0 1156 aa18.54■□□□□ 0.56
GGA1-216ENST00000460957 CPVLQ9H3G5 476 aa18.54■□□□□ 0.56
GGA1-216ENST00000460957 A1CFQ9NQ94 594 aaKnown RBP18.54■□□□□ 0.56
GGA1-216ENST00000460957 MYH6P13533 1939 aa18.53■□□□□ 0.56
GGA1-216ENST00000460957 KRT32Q14532 448 aa18.53■□□□□ 0.56
GGA1-216ENST00000460957 MUM1L1Q5H9M0 696 aa18.53■□□□□ 0.56
GGA1-216ENST00000460957 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.53■□□□□ 0.56
GGA1-216ENST00000460957 ADGRF4Q8IZF3 695 aa18.53■□□□□ 0.56
GGA1-216ENST00000460957 TMTC2Q8N394 836 aa18.53■□□□□ 0.56
GGA1-216ENST00000460957 PAWRQ96IZ0 340 aaKnown RBP18.53■□□□□ 0.56
GGA1-216ENST00000460957 TMEM87BQ96K49 555 aa18.53■□□□□ 0.56
GGA1-216ENST00000460957 NRBP1Q9UHY1 535 aa18.53■□□□□ 0.56
GGA1-216ENST00000460957 ZHX1Q9UKY1 873 aaPredicted RBP18.53■□□□□ 0.56
GGA1-216ENST00000460957 OGDHLQ9ULD0 1010 aa18.53■□□□□ 0.56
GGA1-216ENST00000460957 CENPFP49454 3210 aa18.53■□□□□ 0.56
GGA1-216ENST00000460957 DNAJC25-GNG10A0A024R161 153 aa18.52■□□□□ 0.56
GGA1-216ENST00000460957 KLRF2D3W0D1 207 aa18.52■□□□□ 0.56
GGA1-216ENST00000460957 SEPT4O43236 478 aa18.52■□□□□ 0.56
GGA1-216ENST00000460957 ANO1Q5XXA6 986 aa18.52■□□□□ 0.56
GGA1-216ENST00000460957 ZNF467Q7Z7K2 595 aaPredicted RBP18.52■□□□□ 0.56
GGA1-216ENST00000460957 CTCFLQ8NI51 663 aaPredicted RBP18.52■□□□□ 0.56
GGA1-216ENST00000460957 MTA3Q9BTC8 594 aa18.52■□□□□ 0.56
GGA1-216ENST00000460957 WDR19Q8NEZ3 1342 aa18.51■□□□□ 0.55
GGA1-216ENST00000460957 SYNGAP1Q96PV0 1343 aa18.51■□□□□ 0.55
GGA1-216ENST00000460957 ASB14A6NK59 587 aa18.51■□□□□ 0.55
GGA1-216ENST00000460957 RARBP10826 455 aa18.51■□□□□ 0.55
GGA1-216ENST00000460957 TAL1P17542 331 aaPredicted RBP18.51■□□□□ 0.55
GGA1-216ENST00000460957 ANTXR2P58335 489 aa18.51■□□□□ 0.55
GGA1-216ENST00000460957 FGD1P98174 961 aa18.51■□□□□ 0.55
GGA1-216ENST00000460957 CNTN2Q02246 1040 aa18.51■□□□□ 0.55
GGA1-216ENST00000460957 SYNE3Q6ZMZ3 975 aa18.51■□□□□ 0.55
GGA1-216ENST00000460957 FBXO11Q86XK2 927 aa18.51■□□□□ 0.55
GGA1-216ENST00000460957 ARRDC4Q8NCT1 418 aa18.51■□□□□ 0.55
GGA1-216ENST00000460957 TRPV1Q8NER1 839 aa18.51■□□□□ 0.55
GGA1-216ENST00000460957 NEK1Q96PY6 1258 aa18.51■□□□□ 0.55
GGA1-216ENST00000460957 MPHOSPH6Q99547 160 aaKnown RBP18.51■□□□□ 0.55
GGA1-216ENST00000460957 C11orf49Q9H6J7 331 aa18.51■□□□□ 0.55
GGA1-216ENST00000460957 ADD3Q9UEY8 706 aaKnown RBP18.51■□□□□ 0.55
GGA1-216ENST00000460957 FRMPD3Q5JV73 1810 aa18.51■□□□□ 0.55
GGA1-216ENST00000460957 ABCB11O95342 1321 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms