RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 TMEM132AQ24JP5 1023 aa13.4□□□□□ -0.26
CPNE6-202ENST00000460657 CFAP221Q4G0U5 840 aa13.4□□□□□ -0.26
CPNE6-202ENST00000460657 DGKHQ86XP1 1220 aa13.4□□□□□ -0.26
CPNE6-202ENST00000460657 PDE11AQ9HCR9 933 aa13.4□□□□□ -0.26
CPNE6-202ENST00000460657 NLRC4Q9NPP4 1024 aa13.4□□□□□ -0.26
CPNE6-202ENST00000460657 SAMM50Q9Y512 469 aa13.4□□□□□ -0.26
CPNE6-202ENST00000460657 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.4□□□□□ -0.27
CPNE6-202ENST00000460657 BTDP43251 543 aa13.4□□□□□ -0.27
CPNE6-202ENST00000460657 NKX1-1Q15270 411 aaPredicted RBP13.4□□□□□ -0.27
CPNE6-202ENST00000460657 ATRIPQ8WXE1 791 aa13.4□□□□□ -0.27
CPNE6-202ENST00000460657 MED4Q9NPJ6 270 aa13.4□□□□□ -0.27
CPNE6-202ENST00000460657 GPIHBP1Q8IV16 184 aa13.39□□□□□ -0.27
CPNE6-202ENST00000460657 THAP9Q9H5L6 903 aa13.39□□□□□ -0.27
CPNE6-202ENST00000460657 NDUFA10O95299 355 aa13.39□□□□□ -0.27
CPNE6-202ENST00000460657 GNA14O95837 355 aa13.39□□□□□ -0.27
CPNE6-202ENST00000460657 USP17L8P0C7I0 530 aa13.39□□□□□ -0.27
CPNE6-202ENST00000460657 KLHL30Q0D2K2 578 aa13.39□□□□□ -0.27
CPNE6-202ENST00000460657 PFKFB3Q16875 520 aaPredicted RBP13.39□□□□□ -0.27
CPNE6-202ENST00000460657 FMNL3Q8IVF7 1028 aa13.39□□□□□ -0.27
CPNE6-202ENST00000460657 NELFCDQ8IXH7 590 aa13.39□□□□□ -0.27
CPNE6-202ENST00000460657 FBXL16Q8N461 479 aa13.39□□□□□ -0.27
CPNE6-202ENST00000460657 DISC1Q9NRI5 854 aa13.39□□□□□ -0.27
CPNE6-202ENST00000460657 TBC1D7Q9P0N9 293 aa13.39□□□□□ -0.27
CPNE6-202ENST00000460657 LEMD3Q9Y2U8 911 aa13.39□□□□□ -0.27
CPNE6-202ENST00000460657 HYOU1Q9Y4L1 999 aa13.39□□□□□ -0.27
CPNE6-202ENST00000460657 COL15A1P39059 1388 aa13.39□□□□□ -0.27
CPNE6-202ENST00000460657 TCP1P17987 556 aaKnown RBP13.39□□□□□ -0.27
CPNE6-202ENST00000460657 SENP2Q9HC62 589 aa13.39□□□□□ -0.27
CPNE6-202ENST00000460657 SH3GLB2Q9NR46 395 aa13.39□□□□□ -0.27
CPNE6-202ENST00000460657 KDM3AQ9Y4C1 1321 aa13.39□□□□□ -0.27
CPNE6-202ENST00000460657 ZEB2O60315 1214 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 CUL4BQ13620 913 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 FAM71BQ8TC56 605 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 GDAP1L1Q96MZ0 367 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 MKRN1Q9UHC7 482 aaKnown RBP13.38□□□□□ -0.27
CPNE6-202ENST00000460657 A6NNZ2 444 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 ENC1O14682 589 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 CALUO43852 315 aaPredicted RBP13.38□□□□□ -0.27
CPNE6-202ENST00000460657 CCNE1P24864 410 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 SLC1A4P43007 532 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 TUBB8Q3ZCM7 444 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 RASAL2Q9UJF2 1139 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 KNDC1Q76NI1 1749 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 PPFIA1Q13136 1202 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 EPB41L4AQ9HCS5 686 aaPredicted RBP13.38□□□□□ -0.27
CPNE6-202ENST00000460657 GDAQ9Y2T3 454 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 TEX33O43247 280 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 ATP2B4P23634 1241 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 PAK2Q13177 524 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 SEPT7Q16181 437 aaKnown RBP13.38□□□□□ -0.27
CPNE6-202ENST00000460657 DNM3Q9UQ16 869 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 ADGRG1Q9Y653 693 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 STK24Q9Y6E0 443 aa13.38□□□□□ -0.27
CPNE6-202ENST00000460657 RIMS1Q86UR5 1692 aaKnown RBP13.37□□□□□ -0.27
CPNE6-202ENST00000460657 TMED8Q6PL24 325 aaPredicted RBP13.37□□□□□ -0.27
CPNE6-202ENST00000460657 PLVAPQ9BX97 442 aa13.37□□□□□ -0.27
CPNE6-202ENST00000460657 PCDHA12Q9UN75 941 aa13.37□□□□□ -0.27
CPNE6-202ENST00000460657 MINPP1Q9UNW1 487 aa13.37□□□□□ -0.27
CPNE6-202ENST00000460657 FRMPD2Q68DX3 1309 aaPredicted RBP13.37□□□□□ -0.27
CPNE6-202ENST00000460657 ZBED6P86452 979 aa13.37□□□□□ -0.27
CPNE6-202ENST00000460657 TRMT1LQ7Z2T5 733 aaKnown RBP13.37□□□□□ -0.27
CPNE6-202ENST00000460657 ZNF34Q8IZ26 560 aa13.37□□□□□ -0.27
CPNE6-202ENST00000460657 XDHP47989 1333 aa13.37□□□□□ -0.27
CPNE6-202ENST00000460657 NWD1Q149M9 1564 aa13.37□□□□□ -0.27
CPNE6-202ENST00000460657 NCAPH2Q6IBW4 605 aa13.37□□□□□ -0.27
CPNE6-202ENST00000460657 MB21D1Q8N884 522 aa13.37□□□□□ -0.27
CPNE6-202ENST00000460657 LARP4BQ92615 738 aaKnown RBP13.37□□□□□ -0.27
CPNE6-202ENST00000460657 ABHD10Q9NUJ1 306 aa13.37□□□□□ -0.27
CPNE6-202ENST00000460657 UBR1Q8IWV7 1749 aa13.37□□□□□ -0.27
CPNE6-202ENST00000460657 GSTTP1A0A1W2PQM5 241 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 RNASE9P60153 205 aaKnown RBP13.36□□□□□ -0.27
CPNE6-202ENST00000460657 FMR1Q06787 632 aaKnown RBP eCLIP13.36□□□□□ -0.27
CPNE6-202ENST00000460657 RAD51AP2Q09MP3 1159 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 PTPAQ15257 358 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 CC2D1AQ6P1N0 951 aaPredicted RBP13.36□□□□□ -0.27
CPNE6-202ENST00000460657 CCDC170Q8IYT3 715 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 MICALL1Q8N3F8 863 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 DYNLL2Q96FJ2 89 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 DCP1AQ9NPI6 582 aaPredicted RBP13.36□□□□□ -0.27
CPNE6-202ENST00000460657 AKAP12Q02952 1782 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 TADA3O75528 432 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 NEFHP12036 1026 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 ATP2C1P98194 919 aaPredicted RBP13.36□□□□□ -0.27
CPNE6-202ENST00000460657 FAM26FQ5R3K3 315 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 ELOA2Q8IYF1 753 aaPredicted RBP13.36□□□□□ -0.27
CPNE6-202ENST00000460657 LRRC47Q8N1G4 583 aaKnown RBP13.36□□□□□ -0.27
CPNE6-202ENST00000460657 CCDC155Q8N6L0 562 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 CCDC26Q8TAB7 109 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 LSM14BQ9BX40 385 aaKnown RBP13.36□□□□□ -0.27
CPNE6-202ENST00000460657 PLCG1P19174 1290 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 MAP2K1Q02750 393 aaPredicted RBP13.36□□□□□ -0.27
CPNE6-202ENST00000460657 CCDC174Q6PII3 467 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 TBCKQ8TEA7 893 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 CTNNBL1Q8WYA6 563 aaPredicted RBP13.36□□□□□ -0.27
CPNE6-202ENST00000460657 STK17AQ9UEE5 414 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 GTF2IP78347 998 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 RPS6KA1Q15418 735 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 PSTPIP2Q9H939 334 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 FRMD4BQ9Y2L6 1034 aa13.36□□□□□ -0.27
CPNE6-202ENST00000460657 A0A1B0GTH6 734 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms