RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 RNF208Q9H0X6 261 aa20.79■□□□□ 0.92
PLOD3-209ENST00000460475 PAK6Q9NQU5 681 aaPredicted RBP20.79■□□□□ 0.92
PLOD3-209ENST00000460475 FLRT1Q9NZU1 646 aa20.79■□□□□ 0.92
PLOD3-209ENST00000460475 PLXNA1Q9UIW2 1896 aa20.79■□□□□ 0.92
PLOD3-209ENST00000460475 RPTORQ8N122 1335 aa20.78■□□□□ 0.92
PLOD3-209ENST00000460475 MYCP01106 439 aaPredicted RBP20.78■□□□□ 0.92
PLOD3-209ENST00000460475 ICAM1P05362 532 aa20.78■□□□□ 0.92
PLOD3-209ENST00000460475 GOLGA8HP0CJ92 632 aa20.78■□□□□ 0.92
PLOD3-209ENST00000460475 COL9A3Q14050 684 aaPredicted RBP20.78■□□□□ 0.92
PLOD3-209ENST00000460475 WTAPQ15007 396 aa20.78■□□□□ 0.92
PLOD3-209ENST00000460475 TMEM67Q5HYA8 995 aa20.78■□□□□ 0.92
PLOD3-209ENST00000460475 RASEFQ8IZ41 740 aa20.78■□□□□ 0.92
PLOD3-209ENST00000460475 AGBL1Q96MI9 1066 aa20.78■□□□□ 0.92
PLOD3-209ENST00000460475 SENP2Q9HC62 589 aa20.78■□□□□ 0.92
PLOD3-209ENST00000460475 DIS3Q9Y2L1 958 aaKnown RBP20.78■□□□□ 0.92
PLOD3-209ENST00000460475 DNAJC25-GNG10A0A024R161 153 aa20.77■□□□□ 0.92
PLOD3-209ENST00000460475 PRC1O43663 620 aa20.77■□□□□ 0.92
PLOD3-209ENST00000460475 PARP1P09874 1014 aaKnown RBP20.77■□□□□ 0.92
PLOD3-209ENST00000460475 CAPN2P17655 700 aa20.77■□□□□ 0.92
PLOD3-209ENST00000460475 CACNB2Q08289 660 aaPredicted RBP20.77■□□□□ 0.92
PLOD3-209ENST00000460475 TROAPQ12815 778 aa20.77■□□□□ 0.92
PLOD3-209ENST00000460475 ZNF792Q3KQV3 632 aa20.77■□□□□ 0.92
PLOD3-209ENST00000460475 TMEM87BQ96K49 555 aa20.77■□□□□ 0.92
PLOD3-209ENST00000460475 LY9Q9HBG7 655 aa20.77■□□□□ 0.92
PLOD3-209ENST00000460475 PNMA2Q9UL42 364 aa20.77■□□□□ 0.92
PLOD3-209ENST00000460475 PRKAR2AP13861 404 aaKnown RBP20.76■□□□□ 0.91
PLOD3-209ENST00000460475 EN2P19622 333 aaPredicted RBP20.76■□□□□ 0.91
PLOD3-209ENST00000460475 HSPA4P34932 840 aa20.76■□□□□ 0.91
PLOD3-209ENST00000460475 GJA8P48165 433 aa20.76■□□□□ 0.91
PLOD3-209ENST00000460475 SNAP25P60880 206 aa20.76■□□□□ 0.91
PLOD3-209ENST00000460475 KRT32Q14532 448 aa20.76■□□□□ 0.91
PLOD3-209ENST00000460475 MFSD14CQ5VZR4 134 aa20.76■□□□□ 0.91
PLOD3-209ENST00000460475 CCDC174Q6PII3 467 aa20.76■□□□□ 0.91
PLOD3-209ENST00000460475 TMTC2Q8N394 836 aa20.76■□□□□ 0.91
PLOD3-209ENST00000460475 MAML3Q96JK9 1138 aa20.76■□□□□ 0.91
PLOD3-209ENST00000460475 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.76■□□□□ 0.91
PLOD3-209ENST00000460475 HMX1Q9NP08 348 aaPredicted RBP20.76■□□□□ 0.91
PLOD3-209ENST00000460475 WDR19Q8NEZ3 1342 aa20.76■□□□□ 0.91
PLOD3-209ENST00000460475 TNRC18O15417 2968 aaPredicted RBP20.76■□□□□ 0.91
PLOD3-209ENST00000460475 BAZ2BQ9UIF8 2168 aaKnown RBP20.75■□□□□ 0.91
PLOD3-209ENST00000460475 MKI67P46013 3256 aaKnown RBP20.75■□□□□ 0.91
PLOD3-209ENST00000460475 PALM3A6NDB9 673 aaPredicted RBP20.75■□□□□ 0.91
PLOD3-209ENST00000460475 PGK2P07205 417 aa20.75■□□□□ 0.91
PLOD3-209ENST00000460475 LIFRP42702 1097 aa20.75■□□□□ 0.91
PLOD3-209ENST00000460475 TRERF1Q96PN7 1200 aa20.75■□□□□ 0.91
PLOD3-209ENST00000460475 NEK1Q96PY6 1258 aa20.75■□□□□ 0.91
PLOD3-209ENST00000460475 MAP3K14Q99558 947 aa20.75■□□□□ 0.91
PLOD3-209ENST00000460475 UBA5Q9GZZ9 404 aa20.75■□□□□ 0.91
PLOD3-209ENST00000460475 ACAD9Q9H845 621 aa20.75■□□□□ 0.91
PLOD3-209ENST00000460475 RNF146Q9NTX7 359 aa20.75■□□□□ 0.91
PLOD3-209ENST00000460475 MAD2L2Q9UI95 211 aa20.75■□□□□ 0.91
PLOD3-209ENST00000460475 CCPG1Q9ULG6 757 aa20.75■□□□□ 0.91
PLOD3-209ENST00000460475 SH2B2O14492 632 aaPredicted RBP20.74■□□□□ 0.91
PLOD3-209ENST00000460475 SGPL1O95470 568 aa20.74■□□□□ 0.91
PLOD3-209ENST00000460475 ALAS1P13196 640 aa20.74■□□□□ 0.91
PLOD3-209ENST00000460475 SLC4A3P48751 1232 aa20.74■□□□□ 0.91
PLOD3-209ENST00000460475 EXOSC10Q01780 885 aaKnown RBP20.74■□□□□ 0.91
PLOD3-209ENST00000460475 GRM4Q14833 912 aa20.74■□□□□ 0.91
PLOD3-209ENST00000460475 ADCK5Q3MIX3 580 aa20.74■□□□□ 0.91
PLOD3-209ENST00000460475 ADGRF4Q8IZF3 695 aa20.74■□□□□ 0.91
PLOD3-209ENST00000460475 STAG2Q8N3U4 1231 aa20.74■□□□□ 0.91
PLOD3-209ENST00000460475 U2AF1L4Q8WU68 220 aaKnown RBP20.74■□□□□ 0.91
PLOD3-209ENST00000460475 DDX11Q96FC9 970 aa20.74■□□□□ 0.91
PLOD3-209ENST00000460475 CPVLQ9H3G5 476 aa20.74■□□□□ 0.91
PLOD3-209ENST00000460475 GPHNQ9NQX3 736 aaPredicted RBP20.74■□□□□ 0.91
PLOD3-209ENST00000460475 MYH6P13533 1939 aa20.74■□□□□ 0.91
PLOD3-209ENST00000460475 KLRF2D3W0D1 207 aa20.73■□□□□ 0.91
PLOD3-209ENST00000460475 CYP2C19P33261 490 aa20.73■□□□□ 0.91
PLOD3-209ENST00000460475 CATIPQ7Z7H3 387 aa20.73■□□□□ 0.91
PLOD3-209ENST00000460475 ANKRD35Q8N283 1001 aa20.73■□□□□ 0.91
PLOD3-209ENST00000460475 MSL3Q8N5Y2 521 aaKnown RBP20.73■□□□□ 0.91
PLOD3-209ENST00000460475 SHISA4Q96DD7 197 aa20.73■□□□□ 0.91
PLOD3-209ENST00000460475 CRISPLD2Q9H0B8 497 aa20.73■□□□□ 0.91
PLOD3-209ENST00000460475 HOMER2Q9NSB8 354 aa20.73■□□□□ 0.91
PLOD3-209ENST00000460475 MUM1L1Q5H9M0 696 aa20.72■□□□□ 0.91
PLOD3-209ENST00000460475 DHX32Q7L7V1 743 aaKnown RBP20.72■□□□□ 0.91
PLOD3-209ENST00000460475 ZNF467Q7Z7K2 595 aaPredicted RBP20.72■□□□□ 0.91
PLOD3-209ENST00000460475 SGMS1Q86VZ5 419 aa20.72■□□□□ 0.91
PLOD3-209ENST00000460475 MTMR8Q96EF0 704 aa20.72■□□□□ 0.91
PLOD3-209ENST00000460475 DEFB118Q96PH6 123 aa20.72■□□□□ 0.91
PLOD3-209ENST00000460475 TINF2Q9BSI4 451 aa20.72■□□□□ 0.91
PLOD3-209ENST00000460475 USP26Q9BXU7 913 aa20.72■□□□□ 0.91
PLOD3-209ENST00000460475 JMJD4Q9H9V9 463 aa20.72■□□□□ 0.91
PLOD3-209ENST00000460475 A1CFQ9NQ94 594 aaKnown RBP20.72■□□□□ 0.91
PLOD3-209ENST00000460475 SNX14Q9Y5W7 946 aa20.72■□□□□ 0.91
PLOD3-209ENST00000460475 DDAH1O94760 285 aa20.71■□□□□ 0.91
PLOD3-209ENST00000460475 HMGB1P09429 215 aaKnown RBP20.71■□□□□ 0.91
PLOD3-209ENST00000460475 CYBAP13498 195 aa20.71■□□□□ 0.91
PLOD3-209ENST00000460475 MLLT1Q03111 559 aaPredicted RBP20.71■□□□□ 0.91
PLOD3-209ENST00000460475 MAMDC4Q6UXC1 1216 aa20.71■□□□□ 0.91
PLOD3-209ENST00000460475 ZNF654Q8IZM8 581 aa20.71■□□□□ 0.91
PLOD3-209ENST00000460475 FAM133AQ8N9E0 248 aa20.71■□□□□ 0.91
PLOD3-209ENST00000460475 NRBP1Q9UHY1 535 aa20.71■□□□□ 0.91
PLOD3-209ENST00000460475 CEP290O15078 2479 aa20.71■□□□□ 0.91
PLOD3-209ENST00000460475 PFASO15067 1338 aa20.71■□□□□ 0.91
PLOD3-209ENST00000460475 CCND3P30281 292 aaPredicted RBP20.7■□□□□ 0.9
PLOD3-209ENST00000460475 CDC37Q16543 378 aaPredicted RBP20.7■□□□□ 0.9
PLOD3-209ENST00000460475 SLC35G1Q2M3R5 365 aa20.7■□□□□ 0.9
PLOD3-209ENST00000460475 TRPV1Q8NER1 839 aa20.7■□□□□ 0.9
PLOD3-209ENST00000460475 CLEC4DQ8WXI8 215 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms