RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 GABRQQ9UN88 632 aa14.95□□□□□ -0.02
COL18A1-206ENST00000459895 RIPK3Q9Y572 518 aa14.95□□□□□ -0.02
COL18A1-206ENST00000459895 CTDP1Q9Y5B0 961 aaPredicted RBP14.95□□□□□ -0.02
COL18A1-206ENST00000459895 PTCH2Q9Y6C5 1203 aa14.95□□□□□ -0.02
COL18A1-206ENST00000459895 ZNFX1Q9P2E3 1918 aaKnown RBP14.94□□□□□ -0.02
COL18A1-206ENST00000459895 ZBTB43O43298 467 aa14.94□□□□□ -0.02
COL18A1-206ENST00000459895 CYTH3O43739 400 aa14.94□□□□□ -0.02
COL18A1-206ENST00000459895 DHX16O60231 1041 aaKnown RBP14.94□□□□□ -0.02
COL18A1-206ENST00000459895 RBM25P49756 843 aaKnown RBP14.94□□□□□ -0.02
COL18A1-206ENST00000459895 PLEKHH3Q7Z736 793 aa14.94□□□□□ -0.02
COL18A1-206ENST00000459895 FBXL16Q8N461 479 aa14.94□□□□□ -0.02
COL18A1-206ENST00000459895 AGBL1Q96MI9 1066 aa14.94□□□□□ -0.02
COL18A1-206ENST00000459895 MAP3K14Q99558 947 aa14.94□□□□□ -0.02
COL18A1-206ENST00000459895 BACH2Q9BYV9 841 aa14.94□□□□□ -0.02
COL18A1-206ENST00000459895 JMJD4Q9H9V9 463 aa14.94□□□□□ -0.02
COL18A1-206ENST00000459895 CWC22Q9HCG8 908 aaKnown RBP14.94□□□□□ -0.02
COL18A1-206ENST00000459895 SRRDQ9UH36 339 aa14.94□□□□□ -0.02
COL18A1-206ENST00000459895 CCPG1Q9ULG6 757 aa14.94□□□□□ -0.02
COL18A1-206ENST00000459895 NAP1L2Q9ULW6 460 aaPredicted RBP14.94□□□□□ -0.02
COL18A1-206ENST00000459895 ICAM1P05362 532 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 CALM1P0DP23 149 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 CALM2P0DP24 149 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 CALM3P0DP25 149 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 FDX1P10109 184 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 KIF5BP33176 963 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 STAT3P40763 770 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 SLC4A3P48751 1232 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 GRB14Q14449 540 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 QRICH1Q2TAL8 776 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 TMTC3Q6ZXV5 915 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 CMTR1Q8N1G2 835 aaKnown RBP14.93□□□□□ -0.02
COL18A1-206ENST00000459895 TMTC2Q8N394 836 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 SOCS4Q8WXH5 440 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 COA7Q96BR5 231 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 TBC1D32Q96NH3 1257 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 MCOLN1Q9GZU1 580 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 RNF146Q9NTX7 359 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 PDRG1Q9NUG6 133 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 HPS5Q9UPZ3 1129 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 PTPN22Q9Y2R2 807 aa14.93□□□□□ -0.02
COL18A1-206ENST00000459895 PPP1R11O60927 126 aaPredicted RBP14.92□□□□□ -0.02
COL18A1-206ENST00000459895 SLC25A27O95847 323 aa14.92□□□□□ -0.02
COL18A1-206ENST00000459895 GNRH1P01148 92 aa14.92□□□□□ -0.02
COL18A1-206ENST00000459895 COPB2P35606 906 aa14.92□□□□□ -0.02
COL18A1-206ENST00000459895 FLT3LGP49771 235 aa14.92□□□□□ -0.02
COL18A1-206ENST00000459895 METAP2P50579 478 aaKnown RBP eCLIP14.92□□□□□ -0.02
COL18A1-206ENST00000459895 RCAN1P53805 252 aa14.92□□□□□ -0.02
COL18A1-206ENST00000459895 AK2P54819 239 aa14.92□□□□□ -0.02
COL18A1-206ENST00000459895 RTN1Q16799 776 aa14.92□□□□□ -0.02
COL18A1-206ENST00000459895 USH1GQ495M9 461 aa14.92□□□□□ -0.02
COL18A1-206ENST00000459895 MORN1Q5T089 497 aa14.92□□□□□ -0.02
COL18A1-206ENST00000459895 HOMER1Q86YM7 354 aa14.92□□□□□ -0.02
COL18A1-206ENST00000459895 CCAR1Q8IX12 1150 aaKnown RBP14.92□□□□□ -0.02
COL18A1-206ENST00000459895 MTMR8Q96EF0 704 aa14.92□□□□□ -0.02
COL18A1-206ENST00000459895 APBA2Q99767 749 aa14.92□□□□□ -0.02
COL18A1-206ENST00000459895 LARP6Q9BRS8 491 aaKnown RBP14.92□□□□□ -0.02
COL18A1-206ENST00000459895 SPZ1Q9BXG8 430 aa14.92□□□□□ -0.02
COL18A1-206ENST00000459895 MROH8Q9H579 483 aa14.92□□□□□ -0.02
COL18A1-206ENST00000459895 UPF2Q9HAU5 1272 aaKnown RBP14.92□□□□□ -0.02
COL18A1-206ENST00000459895 BAZ2BQ9UIF8 2168 aaKnown RBP14.91□□□□□ -0.02
COL18A1-206ENST00000459895 BRCA2P51587 3418 aa14.91□□□□□ -0.02
COL18A1-206ENST00000459895 ALAS1P13196 640 aa14.91□□□□□ -0.02
COL18A1-206ENST00000459895 PTPREP23469 700 aa14.91□□□□□ -0.02
COL18A1-206ENST00000459895 ADORA2AP29274 412 aa14.91□□□□□ -0.02
COL18A1-206ENST00000459895 CDC27P30260 824 aa14.91□□□□□ -0.02
COL18A1-206ENST00000459895 MUM1L1Q5H9M0 696 aa14.91□□□□□ -0.02
COL18A1-206ENST00000459895 FBXO46Q6PJ61 603 aaPredicted RBP14.91□□□□□ -0.02
COL18A1-206ENST00000459895 NOL8Q76FK4 1167 aaKnown RBP14.91□□□□□ -0.02
COL18A1-206ENST00000459895 SRBD1Q8N5C6 995 aaKnown RBP14.91□□□□□ -0.02
COL18A1-206ENST00000459895 PIGSQ96S52 555 aa14.91□□□□□ -0.02
COL18A1-206ENST00000459895 RIOX1Q9H6W3 641 aa14.91□□□□□ -0.02
COL18A1-206ENST00000459895 FAM217BQ9NTX9 383 aaPredicted RBP14.91□□□□□ -0.02
COL18A1-206ENST00000459895 IVNS1ABPQ9Y6Y0 642 aa14.91□□□□□ -0.02
COL18A1-206ENST00000459895 MCM3APO60318 1980 aa14.91□□□□□ -0.02
COL18A1-206ENST00000459895 NFIBO00712 420 aa14.9□□□□□ -0.02
COL18A1-206ENST00000459895 LARGE1O95461 756 aa14.9□□□□□ -0.02
COL18A1-206ENST00000459895 EVCP57679 992 aa14.9□□□□□ -0.02
COL18A1-206ENST00000459895 ARHGEF6Q15052 776 aa14.9□□□□□ -0.02
COL18A1-206ENST00000459895 SYNE3Q6ZMZ3 975 aa14.9□□□□□ -0.02
COL18A1-206ENST00000459895 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.9□□□□□ -0.02
COL18A1-206ENST00000459895 FANCBQ8NB91 859 aa14.9□□□□□ -0.02
COL18A1-206ENST00000459895 PIBF1Q8WXW3 757 aa14.9□□□□□ -0.02
COL18A1-206ENST00000459895 USP6NLQ92738 828 aa14.9□□□□□ -0.02
COL18A1-206ENST00000459895 MMP19Q99542 508 aa14.9□□□□□ -0.02
COL18A1-206ENST00000459895 ACAD9Q9H845 621 aa14.9□□□□□ -0.02
COL18A1-206ENST00000459895 NCOA5Q9HCD5 579 aaKnown RBP14.9□□□□□ -0.02
COL18A1-206ENST00000459895 VAT1LQ9HCJ6 419 aa14.9□□□□□ -0.02
COL18A1-206ENST00000459895 RBM28Q9NW13 759 aaKnown RBP14.9□□□□□ -0.02
COL18A1-206ENST00000459895 GJD2Q9UKL4 321 aa14.9□□□□□ -0.02
COL18A1-206ENST00000459895 SLC15A5A6NIM6 579 aa14.89□□□□□ -0.03
COL18A1-206ENST00000459895 ZBTB5O15062 677 aa14.89□□□□□ -0.03
COL18A1-206ENST00000459895 PGK2P07205 417 aa14.89□□□□□ -0.03
COL18A1-206ENST00000459895 ELNP15502 786 aa14.89□□□□□ -0.03
COL18A1-206ENST00000459895 HOXD10P28358 340 aa14.89□□□□□ -0.03
COL18A1-206ENST00000459895 RGS2P41220 211 aa14.89□□□□□ -0.03
COL18A1-206ENST00000459895 NEK4P51957 841 aa14.89□□□□□ -0.03
COL18A1-206ENST00000459895 PRMT2P55345 433 aa14.89□□□□□ -0.03
COL18A1-206ENST00000459895 FUT2Q10981 343 aa14.89□□□□□ -0.03
COL18A1-206ENST00000459895 MAP2K5Q13163 448 aa14.89□□□□□ -0.03
COL18A1-206ENST00000459895 IRF5Q13568 498 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms