RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 SF3B2Q13435 895 aaKnown RBP8.56□□□□□ -1.04
HDAC9-218ENST00000456174 GRIK5Q16478 980 aa8.56□□□□□ -1.04
HDAC9-218ENST00000456174 OLFM4Q6UX06 510 aa8.56□□□□□ -1.04
HDAC9-218ENST00000456174 DNAJC14Q6Y2X3 702 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-218ENST00000456174 SGMS1Q86VZ5 419 aa8.56□□□□□ -1.04
HDAC9-218ENST00000456174 CCDC50Q8IVM0 306 aa8.56□□□□□ -1.04
HDAC9-218ENST00000456174 CCDC102AQ96A19 550 aa8.56□□□□□ -1.04
HDAC9-218ENST00000456174 KIFC2Q96AC6 838 aa8.56□□□□□ -1.04
HDAC9-218ENST00000456174 PAGR1Q9BTK6 254 aa8.56□□□□□ -1.04
HDAC9-218ENST00000456174 LY9Q9HBG7 655 aa8.56□□□□□ -1.04
HDAC9-218ENST00000456174 SENP2Q9HC62 589 aa8.56□□□□□ -1.04
HDAC9-218ENST00000456174 ABCB6Q9NP58 842 aa8.56□□□□□ -1.04
HDAC9-218ENST00000456174 ATP8A2Q9NTI2 1148 aa8.56□□□□□ -1.04
HDAC9-218ENST00000456174 PCDHGA4Q9Y5G9 962 aa8.56□□□□□ -1.04
HDAC9-218ENST00000456174 VWA3AA6NCI4 1184 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 USP17L12C9JPN9 530 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 USP17L21D6R901 530 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 SMIM22K7EJ46 135 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 PES1O00541 588 aaKnown RBP8.55□□□□□ -1.04
HDAC9-218ENST00000456174 CPLX1O14810 134 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 ZSCAN12O43309 604 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 LDHCP07864 332 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 ABCD1P33897 745 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 LIFRP42702 1097 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 DIXDC1Q155Q3 683 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 APOA5Q6Q788 366 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 NFXL1Q6ZNB6 911 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 BRAPQ7Z569 592 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 YTHDF3Q7Z739 585 aaKnown RBP8.55□□□□□ -1.04
HDAC9-218ENST00000456174 NCAPG2Q86XI2 1143 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 C2CD5Q86YS7 1000 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 SAAL1Q96ER3 474 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 CRACR2AQ9BSW2 395 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 SCAND2PQ9GZW5 306 aaPredicted RBP8.55□□□□□ -1.04
HDAC9-218ENST00000456174 DCP1AQ9NPI6 582 aaPredicted RBP8.55□□□□□ -1.04
HDAC9-218ENST00000456174 DDX20Q9UHI6 824 aaKnown RBP8.55□□□□□ -1.04
HDAC9-218ENST00000456174 SSUH2Q9Y2M2 353 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 ECM29Q5VYK3 1845 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 SLX4Q8IY92 1834 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 NAV1Q8NEY1 1877 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 ERICH2A1L162 156 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 H0YIN7 160 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 SYF2O95926 243 aaKnown RBP8.55□□□□□ -1.04
HDAC9-218ENST00000456174 FDPSP14324 419 aaKnown RBP8.55□□□□□ -1.04
HDAC9-218ENST00000456174 ARHGAP25P42331 645 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 METAP2P50579 478 aaKnown RBP eCLIP8.55□□□□□ -1.04
HDAC9-218ENST00000456174 KIF4BQ2VIQ3 1234 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 CEP85LQ5SZL2 805 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 DPP8Q6V1X1 898 aaPredicted RBP8.55□□□□□ -1.04
HDAC9-218ENST00000456174 TSHZ1Q6ZSZ6 1077 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 B4GALNT4Q76KP1 1039 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 SRGAP1Q7Z6B7 1085 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 C3orf20Q8ND61 904 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 ZKSCAN3Q9BRR0 538 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 IRX2Q9BZI1 471 aaPredicted RBP8.55□□□□□ -1.04
HDAC9-218ENST00000456174 MYO6Q9UM54 1294 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 MTMR7Q9Y216 660 aa8.55□□□□□ -1.04
HDAC9-218ENST00000456174 DLEC1Q9Y238 1755 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 SHTN1A0MZ66 631 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 BECN2A8MW95 431 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 ZBTB43O43298 467 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 RTN3O95197 1032 aaPredicted RBP8.54□□□□□ -1.04
HDAC9-218ENST00000456174 BAG3O95817 575 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 EZRP15311 586 aaKnown RBP8.54□□□□□ -1.04
HDAC9-218ENST00000456174 RXRAP19793 462 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 IRAK1P51617 712 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 FOSBP53539 338 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 MFSD14BQ5SR56 506 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 FAM173BQ6P4H8 233 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 MICU3Q86XE3 530 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 ESR2Q92731 530 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 ZBTB10Q96DT7 871 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 PNKPQ96T60 521 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 MTA3Q9BTC8 594 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 ZC3H12CQ9C0D7 883 aaKnown RBP8.54□□□□□ -1.04
HDAC9-218ENST00000456174 COA1Q9GZY4 146 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 KDM4CQ9H3R0 1056 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.54□□□□□ -1.04
HDAC9-218ENST00000456174 SLC12A7Q9Y666 1083 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 MROH7-TTC4A0A0A0MT08 1334 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 STK25O00506 426 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 AHCYL1O43865 530 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 FGRP09769 529 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 PCP11498 1178 aaKnown RBP8.54□□□□□ -1.04
HDAC9-218ENST00000456174 ADD1P35611 737 aaKnown RBP8.54□□□□□ -1.04
HDAC9-218ENST00000456174 BAG6P46379 1132 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 CHMP4BP1P59074 171 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 PPP4CP60510 307 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 RESTQ13127 1097 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 WTAPQ15007 396 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 SBK1Q52WX2 424 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 STYK1Q6J9G0 422 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 SYNE3Q6ZMZ3 975 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 TMTC2Q8N394 836 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 SH3RF3Q8TEJ3 882 aaPredicted RBP8.54□□□□□ -1.04
HDAC9-218ENST00000456174 LMBR1Q8WVP7 490 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 UBAC1Q9BSL1 405 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 MYL10Q9BUA6 226 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 VCPKMTQ9H867 229 aa8.54□□□□□ -1.04
HDAC9-218ENST00000456174 ARPP21Q9UBL0 812 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms