RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 DCAF8L1A6NGE4 600 aa19.17■□□□□ 0.66
PDXDC1-204ENST00000455313 YEATS4O95619 227 aa19.17■□□□□ 0.66
PDXDC1-204ENST00000455313 VCAM1P19320 739 aa19.17■□□□□ 0.66
PDXDC1-204ENST00000455313 SF3A1Q15459 793 aaKnown RBP19.17■□□□□ 0.66
PDXDC1-204ENST00000455313 CHURC1Q8WUH1 139 aa19.17■□□□□ 0.66
PDXDC1-204ENST00000455313 C6orf50Q9HD87 102 aa19.17■□□□□ 0.66
PDXDC1-204ENST00000455313 CSADQ9Y600 493 aa19.17■□□□□ 0.66
PDXDC1-204ENST00000455313 PTPRFP10586 1907 aa19.17■□□□□ 0.66
PDXDC1-204ENST00000455313 MBD3O95983 291 aa19.17■□□□□ 0.66
PDXDC1-204ENST00000455313 GNA11P29992 359 aa19.17■□□□□ 0.66
PDXDC1-204ENST00000455313 TPRNQ4KMQ1 711 aa19.17■□□□□ 0.66
PDXDC1-204ENST00000455313 PIK3AP1Q6ZUJ8 805 aa19.17■□□□□ 0.66
PDXDC1-204ENST00000455313 MOB2Q70IA6 237 aa19.17■□□□□ 0.66
PDXDC1-204ENST00000455313 FAM160B2Q86V87 743 aa19.17■□□□□ 0.66
PDXDC1-204ENST00000455313 KIFC2Q96AC6 838 aa19.17■□□□□ 0.66
PDXDC1-204ENST00000455313 FEM1BQ9UK73 627 aa19.17■□□□□ 0.66
PDXDC1-204ENST00000455313 STK38Q15208 465 aa19.16■□□□□ 0.66
PDXDC1-204ENST00000455313 PGBD1Q96JS3 809 aa19.16■□□□□ 0.66
PDXDC1-204ENST00000455313 GZF1Q9H116 711 aaPredicted RBP19.16■□□□□ 0.66
PDXDC1-204ENST00000455313 PCDHA6Q9UN73 950 aa19.16■□□□□ 0.66
PDXDC1-204ENST00000455313 PCDHA8Q9Y5H6 950 aa19.16■□□□□ 0.66
PDXDC1-204ENST00000455313 PARP14Q460N5 1801 aa19.16■□□□□ 0.66
PDXDC1-204ENST00000455313 AMNQ9BXJ7 453 aa19.16■□□□□ 0.66
PDXDC1-204ENST00000455313 AFG3L2Q9Y4W6 797 aa19.16■□□□□ 0.66
PDXDC1-204ENST00000455313 PCDHA1Q9Y5I3 950 aa19.16■□□□□ 0.66
PDXDC1-204ENST00000455313 SMCHD1A6NHR9 2005 aa19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 ADCY7P51828 1080 aa19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 HMGCS2P54868 508 aa19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 TTLL12Q14166 644 aaPredicted RBP19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 MAP3K11Q16584 847 aa19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 KCNG4Q8TDN1 519 aa19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 PCDHB6Q9Y5E3 794 aa19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 TRAF5O00463 557 aa19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 SLC39A14Q15043 492 aa19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 PTPAQ15257 358 aa19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 FBXO11Q86XK2 927 aa19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 ANKRD13AQ8IZ07 590 aa19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 REXO1Q8N1G1 1221 aaKnown RBP19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 CNKSR2Q8WXI2 1034 aa19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 CLMNQ96JQ2 1002 aa19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 C12orf42Q96LP6 360 aa19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 TANGO6Q9C0B7 1094 aa19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 RANBP17Q9H2T7 1088 aaKnown RBP19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 NMRK2Q9NPI5 230 aa19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 NOL7Q9UMY1 257 aaKnown RBP19.15■□□□□ 0.66
PDXDC1-204ENST00000455313 C19orf81C9J6K1 198 aa19.14■□□□□ 0.65
PDXDC1-204ENST00000455313 SPTLC2O15270 562 aa19.14■□□□□ 0.65
PDXDC1-204ENST00000455313 ATP2B1P20020 1258 aa19.14■□□□□ 0.65
PDXDC1-204ENST00000455313 ME1P48163 572 aa19.14■□□□□ 0.65
PDXDC1-204ENST00000455313 USH1GQ495M9 461 aa19.14■□□□□ 0.65
PDXDC1-204ENST00000455313 SAMD1Q6SPF0 538 aaPredicted RBP19.14■□□□□ 0.65
PDXDC1-204ENST00000455313 BICD2Q8TD16 824 aa19.14■□□□□ 0.65
PDXDC1-204ENST00000455313 RPAP3Q9H6T3 665 aaPredicted RBP19.14■□□□□ 0.65
PDXDC1-204ENST00000455313 RIC8AQ9NPQ8 531 aa19.14■□□□□ 0.65
PDXDC1-204ENST00000455313 CCDC194A0A1B0GVG4 234 aa19.13■□□□□ 0.65
PDXDC1-204ENST00000455313 GOLGA6L4A6NEF3 574 aa19.13■□□□□ 0.65
PDXDC1-204ENST00000455313 WNT7AO00755 349 aa19.13■□□□□ 0.65
PDXDC1-204ENST00000455313 LDHDQ86WU2 507 aa19.13■□□□□ 0.65
PDXDC1-204ENST00000455313 ZNF526Q8TF50 670 aaPredicted RBP19.13■□□□□ 0.65
PDXDC1-204ENST00000455313 SLF1Q9BQI6 1058 aa19.13■□□□□ 0.65
PDXDC1-204ENST00000455313 ELP3Q9H9T3 547 aa19.13■□□□□ 0.65
PDXDC1-204ENST00000455313 TAL1P17542 331 aaPredicted RBP19.13■□□□□ 0.65
PDXDC1-204ENST00000455313 FMR1Q06787 632 aaKnown RBP eCLIP19.13■□□□□ 0.65
PDXDC1-204ENST00000455313 CUL5Q93034 780 aa19.13■□□□□ 0.65
PDXDC1-204ENST00000455313 RLFQ13129 1914 aa19.12■□□□□ 0.65
PDXDC1-204ENST00000455313 FLOT1O75955 427 aa19.12■□□□□ 0.65
PDXDC1-204ENST00000455313 TRAPPC10P48553 1259 aa19.12■□□□□ 0.65
PDXDC1-204ENST00000455313 CAVIN1Q6NZI2 390 aaKnown RBP19.12■□□□□ 0.65
PDXDC1-204ENST00000455313 ARMC9Q7Z3E5 817 aa19.12■□□□□ 0.65
PDXDC1-204ENST00000455313 PRPF38AQ8NAV1 312 aaKnown RBP19.12■□□□□ 0.65
PDXDC1-204ENST00000455313 BIN2Q9UBW5 565 aaPredicted RBP19.12■□□□□ 0.65
PDXDC1-204ENST00000455313 PCDHA7Q9UN72 937 aa19.12■□□□□ 0.65
PDXDC1-204ENST00000455313 TTC38Q5R3I4 469 aa19.12■□□□□ 0.65
PDXDC1-204ENST00000455313 CCDC174Q6PII3 467 aa19.12■□□□□ 0.65
PDXDC1-204ENST00000455313 KRT25Q7Z3Z0 450 aa19.12■□□□□ 0.65
PDXDC1-204ENST00000455313 RBM46Q8TBY0 533 aaKnown RBP19.12■□□□□ 0.65
PDXDC1-204ENST00000455313 PSTPIP2Q9H939 334 aa19.12■□□□□ 0.65
PDXDC1-204ENST00000455313 ZNF408Q9H9D4 720 aa19.12■□□□□ 0.65
PDXDC1-204ENST00000455313 MARCKSP29966 332 aaPredicted RBP19.11■□□□□ 0.65
PDXDC1-204ENST00000455313 UBE2SQ16763 222 aa19.11■□□□□ 0.65
PDXDC1-204ENST00000455313 JAKMIP3Q5VZ66 844 aa19.11■□□□□ 0.65
PDXDC1-204ENST00000455313 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.11■□□□□ 0.65
PDXDC1-204ENST00000455313 TMEM260Q9NX78 707 aa19.11■□□□□ 0.65
PDXDC1-204ENST00000455313 PPP1R9AQ9ULJ8 1098 aa19.11■□□□□ 0.65
PDXDC1-204ENST00000455313 SPDYE5A6NIY4 337 aa19.1■□□□□ 0.65
PDXDC1-204ENST00000455313 PPP6R2O75170 966 aa19.1■□□□□ 0.65
PDXDC1-204ENST00000455313 MRPL12P52815 198 aaKnown RBP19.1■□□□□ 0.65
PDXDC1-204ENST00000455313 INF2Q27J81 1249 aa19.1■□□□□ 0.65
PDXDC1-204ENST00000455313 SH3D19Q5HYK7 790 aa19.1■□□□□ 0.65
PDXDC1-204ENST00000455313 ERO1BQ86YB8 467 aa19.1■□□□□ 0.65
PDXDC1-204ENST00000455313 OTUD5Q96G74 571 aa19.1■□□□□ 0.65
PDXDC1-204ENST00000455313 TMOD4Q9NZQ9 345 aa19.1■□□□□ 0.65
PDXDC1-204ENST00000455313 LOC285556D6RIA3 1793 aa19.1■□□□□ 0.65
PDXDC1-204ENST00000455313 CLK2P49760 499 aaKnown RBP19.1■□□□□ 0.65
PDXDC1-204ENST00000455313 PPATQ06203 517 aa19.1■□□□□ 0.65
PDXDC1-204ENST00000455313 NONOQ15233 471 aaKnown RBP eCLIP19.1■□□□□ 0.65
PDXDC1-204ENST00000455313 JMYQ8N9B5 988 aa19.1■□□□□ 0.65
PDXDC1-204ENST00000455313 CEP131Q9UPN4 1083 aa19.1■□□□□ 0.65
PDXDC1-204ENST00000455313 OPLAHO14841 1288 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms