RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 F5H6K3 240 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 ADAMTS4O75173 837 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 NDUFB10O96000 172 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 FOSL2P15408 326 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 RASA1P20936 1047 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 CST5P28325 142 aaPredicted RBP9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 TDO2P48775 406 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 KLRC3Q07444 240 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 POTEGQ6S5H5 508 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 SH3RF1Q7Z6J0 888 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 ZNF444Q8N0Y2 327 aaPredicted RBP9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 KBTBD3Q8NAB2 608 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 CHST13Q8NET6 341 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 APPBP2Q92624 585 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 SYMPKQ92797 1274 aaKnown RBP9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 NACAP1Q9BZK3 213 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 PUS7LQ9H0K6 701 aaKnown RBP9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 ABHD16BQ9H3Z7 469 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 MCM3APO60318 1980 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 DNAH12Q6ZR08 3092 aa9.57□□□□□ -0.88
NIF3L1-209ENST00000454952 SYNRGQ9UMZ2 1314 aa9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 MINDY4BA8MYZ0 360 aa9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 TLR3O15455 904 aaKnown RBP9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 RNF113AO15541 343 aaKnown RBP9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 TTLL1O95922 423 aa9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 TIMP1P01033 207 aa9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 TAL1P17542 331 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 PDE4BQ07343 736 aa9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 PPIGQ13427 754 aaKnown RBP eCLIP9.56□□□□□ -0.881e-6■■■■□ 25.5
NIF3L1-209ENST00000454952 ACVR2BQ13705 512 aa9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 SLFNL1Q499Z3 407 aa9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 ANKRD35Q8N283 1001 aa9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 GMCL1P1Q8NEA9 526 aa9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 KLHDC9Q8NEP7 349 aa9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 MKL1Q969V6 931 aa9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 SEZ6LQ9BYH1 1024 aa9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 SLC38A10Q9HBR0 1119 aa9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 CLIP2Q9UDT6 1046 aa9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 RCAN3Q9UKA8 241 aa9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 ZHX1Q9UKY1 873 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-209ENST00000454952 A0A0C4DFX4 3053 aa9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 A0A0U1RQG5 324 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 GSG1L2A8MUP6 293 aa9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 CABYRO75952 493 aa9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 SNAI1O95863 264 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 APPP05067 770 aa9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 C6orf222P0C671 652 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 FAAP100Q0VG06 881 aa9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 KCNA10Q16322 511 aa9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 TKFCQ3LXA3 575 aa9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 CCDC129Q6ZRS4 1044 aa9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 FAM160B2Q86V87 743 aa9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 CPXCR1Q8N123 301 aa9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 TMEM199Q8N511 208 aa9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 CHURC1Q8WUH1 139 aa9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 KIFC2Q96AC6 838 aa9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 VTI1AQ96AJ9 217 aa9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 UPF3AQ9H1J1 476 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 MTIF3Q9H2K0 278 aaKnown RBP9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 MTMR4Q9NYA4 1195 aa9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 MYO9BQ13459 2157 aa9.55□□□□□ -0.88
NIF3L1-209ENST00000454952 PLIN4Q96Q06 1357 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 IGKV6D-41A0A0C4DH26 115 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 ASB14A6NK59 587 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 SMIM22K7EJ46 135 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 ERC2O15083 957 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 GPAA1O43292 621 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 ZEB2O60315 1214 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 TSPY3P0CV98 308 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 TSPY8P0CW00 308 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 BMP3P12645 472 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 DNAJB2P25686 324 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 SLC4A3P48751 1232 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 STAT2P52630 851 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 GJA9P57773 515 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 CCDC144BQ3MJ40 725 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 GNASQ5JWF2 1037 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 DIEXFQ68CQ4 756 aaKnown RBP9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 CCSAPQ6IQ19 270 aaPredicted RBP9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 MFSD5Q6N075 450 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 PSRC1Q6PGN9 363 aaPredicted RBP9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 EFCAB3Q8N7B9 438 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 FBXO22Q8NEZ5 403 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 MYLIPQ8WY64 445 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 CEP95Q96GE4 821 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 NUP88Q99567 741 aaPredicted RBP9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 TTYH1Q9H313 450 aaPredicted RBP9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 ACAD9Q9H845 621 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 TBX21Q9UL17 535 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 RIPK3Q9Y572 518 aa9.54□□□□□ -0.88
NIF3L1-209ENST00000454952 PATL2C9JE40 543 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 ARVCFO00192 962 aa9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 GALR2O43603 387 aaPredicted RBP9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 ASGR1P07306 291 aa9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 ITGB8P26012 769 aa9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 CDK7P50613 346 aa9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 EPHB4P54760 987 aa9.53□□□□□ -0.88
NIF3L1-209ENST00000454952 NKX3-2P78367 333 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms