RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 VAMP4O75379 141 aa7.3□□□□□ -1.24
CDH19-202ENST00000454642 DNAJC8O75937 253 aaPredicted RBP7.3□□□□□ -1.24
CDH19-202ENST00000454642 CAPNS1P04632 268 aa7.3□□□□□ -1.24
CDH19-202ENST00000454642 C6orf222P0C671 652 aaPredicted RBP7.3□□□□□ -1.24
CDH19-202ENST00000454642 FGD2Q7Z6J4 655 aa7.3□□□□□ -1.24
CDH19-202ENST00000454642 CRACR2BQ8N4Y2 399 aaPredicted RBP7.3□□□□□ -1.24
CDH19-202ENST00000454642 ATL2Q8NHH9 583 aa7.3□□□□□ -1.24
CDH19-202ENST00000454642 RNF141Q8WVD5 230 aa7.3□□□□□ -1.24
CDH19-202ENST00000454642 UBL7Q96S82 380 aaPredicted RBP7.3□□□□□ -1.24
CDH19-202ENST00000454642 CEP89Q96ST8 783 aa7.3□□□□□ -1.24
CDH19-202ENST00000454642 PRDM10Q9NQV6 1147 aa7.3□□□□□ -1.24
CDH19-202ENST00000454642 MAGEC2Q9UBF1 373 aaPredicted RBP7.3□□□□□ -1.24
CDH19-202ENST00000454642 CNTNAP5Q8WYK1 1306 aa7.3□□□□□ -1.24
CDH19-202ENST00000454642 RUSC2Q8N2Y8 1516 aa7.29□□□□□ -1.24
CDH19-202ENST00000454642 SNRPB2P08579 225 aaKnown RBP7.29□□□□□ -1.24
CDH19-202ENST00000454642 ECI1P42126 302 aa7.29□□□□□ -1.24
CDH19-202ENST00000454642 NEK4P51957 841 aa7.29□□□□□ -1.24
CDH19-202ENST00000454642 ZNF460Q14592 562 aa7.29□□□□□ -1.24
CDH19-202ENST00000454642 DPY19L1Q2PZI1 675 aa7.29□□□□□ -1.24
CDH19-202ENST00000454642 BRDTQ58F21 947 aaPredicted RBP7.29□□□□□ -1.24
CDH19-202ENST00000454642 STRA8Q7Z7C7 330 aa7.29□□□□□ -1.24
CDH19-202ENST00000454642 TOP6BLQ8N6T0 577 aa7.29□□□□□ -1.24
CDH19-202ENST00000454642 DSCC1Q9BVC3 393 aa7.29□□□□□ -1.24
CDH19-202ENST00000454642 ASPNQ9BXN1 380 aa7.29□□□□□ -1.24
CDH19-202ENST00000454642 CEP41Q9BYV8 373 aa7.29□□□□□ -1.24
CDH19-202ENST00000454642 TRIM39Q9HCM9 518 aa7.29□□□□□ -1.24
CDH19-202ENST00000454642 TYW1Q9NV66 732 aaKnown RBP7.29□□□□□ -1.24
CDH19-202ENST00000454642 MCM8Q9UJA3 840 aa7.29□□□□□ -1.24
CDH19-202ENST00000454642 MAPRE3Q9UPY8 281 aa7.29□□□□□ -1.24
CDH19-202ENST00000454642 TNPO3Q9Y5L0 923 aaKnown RBP7.29□□□□□ -1.24
CDH19-202ENST00000454642 CNTNAP4Q9C0A0 1308 aa7.29□□□□□ -1.24
CDH19-202ENST00000454642 KDM6BO15054 1643 aa7.29□□□□□ -1.24
CDH19-202ENST00000454642 DNAJC25-GNG10A0A024R161 153 aa7.28□□□□□ -1.24
CDH19-202ENST00000454642 IREB2P48200 963 aaKnown RBP7.28□□□□□ -1.24
CDH19-202ENST00000454642 STRN3Q13033 797 aa7.28□□□□□ -1.24
CDH19-202ENST00000454642 TMC3Q7Z5M5 1100 aa7.28□□□□□ -1.24
CDH19-202ENST00000454642 BEND7Q8N7W2 519 aaPredicted RBP7.28□□□□□ -1.24
CDH19-202ENST00000454642 TMEM145Q8NBT3 493 aa7.28□□□□□ -1.24
CDH19-202ENST00000454642 KCTD13Q8WZ19 329 aa7.28□□□□□ -1.24
CDH19-202ENST00000454642 DCAF5Q96JK2 942 aa7.28□□□□□ -1.24
CDH19-202ENST00000454642 FBXL18Q96ME1 805 aa7.28□□□□□ -1.24
CDH19-202ENST00000454642 PSMG3-AS1Q96PY0 264 aa7.28□□□□□ -1.24
CDH19-202ENST00000454642 FHOD1Q9Y613 1164 aa7.28□□□□□ -1.24
CDH19-202ENST00000454642 OPA1O60313 960 aa7.28□□□□□ -1.24
CDH19-202ENST00000454642 GFRA1P56159 465 aa7.28□□□□□ -1.24
CDH19-202ENST00000454642 WWC2Q6AWC2 1192 aa7.28□□□□□ -1.24
CDH19-202ENST00000454642 DDX1Q92499 740 aaKnown RBP7.28□□□□□ -1.24
CDH19-202ENST00000454642 YIPF2Q9BWQ6 316 aa7.28□□□□□ -1.24
CDH19-202ENST00000454642 INTS7Q9NVH2 962 aaKnown RBP7.28□□□□□ -1.24
CDH19-202ENST00000454642 TRAF6Q9Y4K3 522 aa7.28□□□□□ -1.24
CDH19-202ENST00000454642 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.27□□□□□ -1.25
CDH19-202ENST00000454642 FAM83GA6ND36 823 aa7.27□□□□□ -1.25
CDH19-202ENST00000454642 KPNA6O60684 536 aa7.27□□□□□ -1.25
CDH19-202ENST00000454642 CBX7O95931 251 aa7.27□□□□□ -1.25
CDH19-202ENST00000454642 ITGB2P05107 769 aa7.27□□□□□ -1.25
CDH19-202ENST00000454642 BMP3P12645 472 aa7.27□□□□□ -1.25
CDH19-202ENST00000454642 GABREP78334 506 aa7.27□□□□□ -1.25
CDH19-202ENST00000454642 PCBP1Q15365 356 aaKnown RBP eCLIP7.27□□□□□ -1.25
CDH19-202ENST00000454642 NTRK3Q16288 839 aa7.27□□□□□ -1.25
CDH19-202ENST00000454642 TRIM61Q5EBN2 209 aa7.27□□□□□ -1.25
CDH19-202ENST00000454642 USP53Q70EK8 1073 aa7.27□□□□□ -1.25
CDH19-202ENST00000454642 FMNL3Q8IVF7 1028 aa7.27□□□□□ -1.25
CDH19-202ENST00000454642 AFAP1L2Q8N4X5 818 aa7.27□□□□□ -1.25
CDH19-202ENST00000454642 SYTL5Q8TDW5 730 aaPredicted RBP7.27□□□□□ -1.25
CDH19-202ENST00000454642 NKX2-4Q9H2Z4 354 aa7.27□□□□□ -1.25
CDH19-202ENST00000454642 PIK3R2O00459 728 aa7.26□□□□□ -1.25
CDH19-202ENST00000454642 LEFTY1O75610 366 aa7.26□□□□□ -1.25
CDH19-202ENST00000454642 RASGRP1O95267 797 aa7.26□□□□□ -1.25
CDH19-202ENST00000454642 EOMESO95936 686 aa7.26□□□□□ -1.25
CDH19-202ENST00000454642 NOS3P29474 1203 aa7.26□□□□□ -1.25
CDH19-202ENST00000454642 EXOSC10Q01780 885 aaKnown RBP7.26□□□□□ -1.25
CDH19-202ENST00000454642 PLA2G4EQ3MJ16 856 aa7.26□□□□□ -1.25
CDH19-202ENST00000454642 DDX46Q7L014 1031 aaKnown RBP7.26□□□□□ -1.25
CDH19-202ENST00000454642 PODNQ7Z5L7 613 aa7.26□□□□□ -1.25
CDH19-202ENST00000454642 LENG1Q96BZ8 264 aaPredicted RBP7.26□□□□□ -1.25
CDH19-202ENST00000454642 SCLYQ96I15 445 aa7.26□□□□□ -1.25
CDH19-202ENST00000454642 KCNF1Q9H3M0 494 aa7.26□□□□□ -1.25
CDH19-202ENST00000454642 NOP53Q9NZM5 478 aaKnown RBP7.26□□□□□ -1.25
CDH19-202ENST00000454642 DIS3Q9Y2L1 958 aaKnown RBP7.26□□□□□ -1.25
CDH19-202ENST00000454642 PRG4Q92954 1404 aaPredicted RBP7.26□□□□□ -1.25
CDH19-202ENST00000454642 A0A087WZG4 1122 aa7.25□□□□□ -1.25
CDH19-202ENST00000454642 H0Y8X5 98 aa7.25□□□□□ -1.25
CDH19-202ENST00000454642 PRAMEF1O95521 474 aa7.25□□□□□ -1.25
CDH19-202ENST00000454642 JMJD7P0C870 316 aa7.25□□□□□ -1.25
CDH19-202ENST00000454642 HOXC12P31275 282 aa7.25□□□□□ -1.25
CDH19-202ENST00000454642 AMPD2Q01433 879 aa7.25□□□□□ -1.25
CDH19-202ENST00000454642 MAP7Q14244 749 aa7.25□□□□□ -1.25
CDH19-202ENST00000454642 NFKBIBQ15653 356 aa7.25□□□□□ -1.25
CDH19-202ENST00000454642 PKN3Q6P5Z2 889 aa7.25□□□□□ -1.25
CDH19-202ENST00000454642 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.25□□□□□ -1.25
CDH19-202ENST00000454642 RAVER1Q8IY67 606 aaKnown RBP7.25□□□□□ -1.25
CDH19-202ENST00000454642 PPM1KQ8N3J5 372 aa7.25□□□□□ -1.25
CDH19-202ENST00000454642 WFDC12Q8WWY7 111 aa7.25□□□□□ -1.25
CDH19-202ENST00000454642 PTPRN2Q92932 1015 aa7.25□□□□□ -1.25
CDH19-202ENST00000454642 UTP4Q969X6 686 aaKnown RBP7.25□□□□□ -1.25
CDH19-202ENST00000454642 FAM46AQ96IP4 442 aaKnown RBP7.25□□□□□ -1.25
CDH19-202ENST00000454642 THRAP3Q9Y2W1 955 aaKnown RBP7.25□□□□□ -1.25
CDH19-202ENST00000454642 ADCY10Q96PN6 1610 aa7.25□□□□□ -1.25
CDH19-202ENST00000454642 FAM95CA0A1B0GW59 222 aa7.25□□□□□ -1.25
CDH19-202ENST00000454642 KATNA1O75449 491 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms