RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 POTEFA5A3E0 1075 aa16.57■□□□□ 0.24
HDAC4-205ENST00000454542 FCER1AP12319 257 aa16.57■□□□□ 0.24
HDAC4-205ENST00000454542 CCL5P13501 91 aa16.57■□□□□ 0.24
HDAC4-205ENST00000454542 LIFRP42702 1097 aa16.57■□□□□ 0.24
HDAC4-205ENST00000454542 TRIM32Q13049 653 aa16.57■□□□□ 0.24
HDAC4-205ENST00000454542 KRT32Q14532 448 aa16.57■□□□□ 0.24
HDAC4-205ENST00000454542 GRM4Q14833 912 aa16.57■□□□□ 0.24
HDAC4-205ENST00000454542 ADCK5Q3MIX3 580 aa16.57■□□□□ 0.24
HDAC4-205ENST00000454542 TMEM67Q5HYA8 995 aa16.57■□□□□ 0.24
HDAC4-205ENST00000454542 OLFML2BQ68BL8 750 aa16.57■□□□□ 0.24
HDAC4-205ENST00000454542 CPXCR1Q8N123 301 aa16.57■□□□□ 0.24
HDAC4-205ENST00000454542 MMP19Q99542 508 aa16.57■□□□□ 0.24
HDAC4-205ENST00000454542 FBXO40Q9UH90 709 aa16.57■□□□□ 0.24
HDAC4-205ENST00000454542 MAD2L2Q9UI95 211 aa16.57■□□□□ 0.24
HDAC4-205ENST00000454542 KIAA0100Q14667 2235 aaKnown RBP16.57■□□□□ 0.24
HDAC4-205ENST00000454542 SMCHD1A6NHR9 2005 aa16.57■□□□□ 0.24
HDAC4-205ENST00000454542 PALM3A6NDB9 673 aaPredicted RBP16.56■□□□□ 0.24
HDAC4-205ENST00000454542 DDAH1O94760 285 aa16.56■□□□□ 0.24
HDAC4-205ENST00000454542 PARP1P09874 1014 aaKnown RBP16.56■□□□□ 0.24
HDAC4-205ENST00000454542 GOLGA8HP0CJ92 632 aa16.56■□□□□ 0.24
HDAC4-205ENST00000454542 EXOSC10Q01780 885 aaKnown RBP16.56■□□□□ 0.24
HDAC4-205ENST00000454542 ZNF792Q3KQV3 632 aa16.56■□□□□ 0.24
HDAC4-205ENST00000454542 SGMS1Q86VZ5 419 aa16.56■□□□□ 0.24
HDAC4-205ENST00000454542 SHISA4Q96DD7 197 aa16.56■□□□□ 0.24
HDAC4-205ENST00000454542 AGBL1Q96MI9 1066 aa16.56■□□□□ 0.24
HDAC4-205ENST00000454542 NEK1Q96PY6 1258 aa16.56■□□□□ 0.24
HDAC4-205ENST00000454542 MAP3K14Q99558 947 aa16.56■□□□□ 0.24
HDAC4-205ENST00000454542 UNC93B1Q9H1C4 597 aa16.56■□□□□ 0.24
HDAC4-205ENST00000454542 ACAD9Q9H845 621 aa16.56■□□□□ 0.24
HDAC4-205ENST00000454542 GPHNQ9NQX3 736 aaPredicted RBP16.56■□□□□ 0.24
HDAC4-205ENST00000454542 DIS3Q9Y2L1 958 aaKnown RBP16.56■□□□□ 0.24
HDAC4-205ENST00000454542 CTDP1Q9Y5B0 961 aaPredicted RBP16.56■□□□□ 0.24
HDAC4-205ENST00000454542 SNX14Q9Y5W7 946 aa16.56■□□□□ 0.24
HDAC4-205ENST00000454542 MYH6P13533 1939 aa16.55■□□□□ 0.24
HDAC4-205ENST00000454542 GJB1P08034 283 aa16.55■□□□□ 0.24
HDAC4-205ENST00000454542 SNAP25P60880 206 aa16.55■□□□□ 0.24
HDAC4-205ENST00000454542 KCTD2Q14681 263 aa16.55■□□□□ 0.24
HDAC4-205ENST00000454542 SLC35G1Q2M3R5 365 aa16.55■□□□□ 0.24
HDAC4-205ENST00000454542 CCDC174Q6PII3 467 aa16.55■□□□□ 0.24
HDAC4-205ENST00000454542 ZNF654Q8IZM8 581 aa16.55■□□□□ 0.24
HDAC4-205ENST00000454542 STAG2Q8N3U4 1231 aa16.55■□□□□ 0.24
HDAC4-205ENST00000454542 MTMR8Q96EF0 704 aa16.55■□□□□ 0.24
HDAC4-205ENST00000454542 MAML3Q96JK9 1138 aa16.55■□□□□ 0.24
HDAC4-205ENST00000454542 FGD4Q96M96 766 aa16.55■□□□□ 0.24
HDAC4-205ENST00000454542 CPVLQ9H3G5 476 aa16.55■□□□□ 0.24
HDAC4-205ENST00000454542 RNF146Q9NTX7 359 aa16.55■□□□□ 0.24
HDAC4-205ENST00000454542 PNMA2Q9UL42 364 aa16.55■□□□□ 0.24
HDAC4-205ENST00000454542 CCPG1Q9ULG6 757 aa16.55■□□□□ 0.24
HDAC4-205ENST00000454542 RPTORQ8N122 1335 aa16.54■□□□□ 0.24
HDAC4-205ENST00000454542 PRKAR2AP13861 404 aaKnown RBP16.54■□□□□ 0.24
HDAC4-205ENST00000454542 TAL1P17542 331 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-205ENST00000454542 CACNB2Q08289 660 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-205ENST00000454542 DPP9Q86TI2 863 aa16.54■□□□□ 0.24
HDAC4-205ENST00000454542 USP26Q9BXU7 913 aa16.54■□□□□ 0.24
HDAC4-205ENST00000454542 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.54■□□□□ 0.241e-5■■■□□ 15.6
HDAC4-205ENST00000454542 A1CFQ9NQ94 594 aaKnown RBP16.54■□□□□ 0.24
HDAC4-205ENST00000454542 SLC5A4Q9NY91 659 aa16.54■□□□□ 0.24
HDAC4-205ENST00000454542 PGK2P07205 417 aa16.53■□□□□ 0.24
HDAC4-205ENST00000454542 CYBAP13498 195 aa16.53■□□□□ 0.24
HDAC4-205ENST00000454542 GJA8P48165 433 aa16.53■□□□□ 0.24
HDAC4-205ENST00000454542 CDC37Q16543 378 aaPredicted RBP16.53■□□□□ 0.24
HDAC4-205ENST00000454542 MUM1L1Q5H9M0 696 aa16.53■□□□□ 0.24
HDAC4-205ENST00000454542 DHX32Q7L7V1 743 aaKnown RBP16.53■□□□□ 0.24
HDAC4-205ENST00000454542 CATIPQ7Z7H3 387 aa16.53■□□□□ 0.24
HDAC4-205ENST00000454542 ZNF467Q7Z7K2 595 aaPredicted RBP16.53■□□□□ 0.24
HDAC4-205ENST00000454542 ADGRF4Q8IZF3 695 aa16.53■□□□□ 0.24
HDAC4-205ENST00000454542 TRERF1Q96PN7 1200 aa16.53■□□□□ 0.24
HDAC4-205ENST00000454542 TMEM106CQ9BVX2 250 aa16.53■□□□□ 0.24
HDAC4-205ENST00000454542 UBA5Q9GZZ9 404 aa16.53■□□□□ 0.24
HDAC4-205ENST00000454542 JMJD4Q9H9V9 463 aa16.53■□□□□ 0.24
HDAC4-205ENST00000454542 BIN2Q9UBW5 565 aaPredicted RBP16.53■□□□□ 0.24
HDAC4-205ENST00000454542 NID2Q14112 1375 aa16.52■□□□□ 0.24
HDAC4-205ENST00000454542 PFASO15067 1338 aa16.52■□□□□ 0.24
HDAC4-205ENST00000454542 HMGB1P09429 215 aaKnown RBP16.52■□□□□ 0.24
HDAC4-205ENST00000454542 ALAS1P13196 640 aa16.52■□□□□ 0.24
HDAC4-205ENST00000454542 CAPN2P17655 700 aa16.52■□□□□ 0.24
HDAC4-205ENST00000454542 MFSD14CQ5VZR4 134 aa16.52■□□□□ 0.24
HDAC4-205ENST00000454542 TMTC2Q8N394 836 aa16.52■□□□□ 0.24
HDAC4-205ENST00000454542 FBXL16Q8N461 479 aa16.52■□□□□ 0.24
HDAC4-205ENST00000454542 MSL3Q8N5Y2 521 aaKnown RBP16.52■□□□□ 0.24
HDAC4-205ENST00000454542 FAM133AQ8N9E0 248 aa16.52■□□□□ 0.24
HDAC4-205ENST00000454542 CLEC4DQ8WXI8 215 aa16.52■□□□□ 0.24
HDAC4-205ENST00000454542 LRRC2Q9BYS8 371 aa16.52■□□□□ 0.24
HDAC4-205ENST00000454542 CRISPLD2Q9H0B8 497 aa16.52■□□□□ 0.24
HDAC4-205ENST00000454542 RNF208Q9H0X6 261 aa16.52■□□□□ 0.24
HDAC4-205ENST00000454542 RIOX1Q9H6W3 641 aa16.52■□□□□ 0.24
HDAC4-205ENST00000454542 MKI67P46013 3256 aaKnown RBP16.51■□□□□ 0.23
HDAC4-205ENST00000454542 SYNGAP1Q96PV0 1343 aa16.51■□□□□ 0.23
HDAC4-205ENST00000454542 KLRF2D3W0D1 207 aa16.51■□□□□ 0.23
HDAC4-205ENST00000454542 CYTH3O43739 400 aa16.51■□□□□ 0.23
HDAC4-205ENST00000454542 MYCP01106 439 aaPredicted RBP16.51■□□□□ 0.23
HDAC4-205ENST00000454542 QRICH1Q2TAL8 776 aa16.51■□□□□ 0.23
HDAC4-205ENST00000454542 MAMDC4Q6UXC1 1216 aa16.51■□□□□ 0.23
HDAC4-205ENST00000454542 TRPV1Q8NER1 839 aa16.51■□□□□ 0.23
HDAC4-205ENST00000454542 U2AF1L4Q8WU68 220 aaKnown RBP16.51■□□□□ 0.23
HDAC4-205ENST00000454542 IL17RAQ96F46 866 aa16.51■□□□□ 0.23
HDAC4-205ENST00000454542 AGXT2Q9BYV1 514 aa16.51■□□□□ 0.23
HDAC4-205ENST00000454542 MAF1Q9H063 256 aa16.51■□□□□ 0.23
HDAC4-205ENST00000454542 HMX1Q9NP08 348 aaPredicted RBP16.51■□□□□ 0.23
HDAC4-205ENST00000454542 HOMER2Q9NSB8 354 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms