RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 POTEDQ86YR6 584 aa13.44□□□□□ -0.26
SMPD4-213ENST00000454468 ATRIPQ8WXE1 791 aa13.44□□□□□ -0.26
SMPD4-213ENST00000454468 PSMB7Q99436 277 aa13.44□□□□□ -0.26
SMPD4-213ENST00000454468 VEZTQ9HBM0 779 aa13.44□□□□□ -0.26
SMPD4-213ENST00000454468 INTS13Q9NVM9 706 aa13.44□□□□□ -0.26
SMPD4-213ENST00000454468 MATR3P43243 847 aaKnown RBP eCLIP13.44□□□□□ -0.26
SMPD4-213ENST00000454468 TRIML1Q8N9V2 468 aa13.44□□□□□ -0.26
SMPD4-213ENST00000454468 IPO4Q8TEX9 1081 aaKnown RBP13.44□□□□□ -0.26
SMPD4-213ENST00000454468 DISC1Q9NRI5 854 aa13.44□□□□□ -0.26
SMPD4-213ENST00000454468 FAM207AQ9NSI2 230 aaPredicted RBP13.44□□□□□ -0.26
SMPD4-213ENST00000454468 LUC7L2Q9Y383 392 aaKnown RBP13.44□□□□□ -0.26
SMPD4-213ENST00000454468 DAGLAQ9Y4D2 1042 aa13.44□□□□□ -0.26
SMPD4-213ENST00000454468 PCDHAC2Q9Y5I4 1007 aa13.44□□□□□ -0.26
SMPD4-213ENST00000454468 MYH2Q9UKX2 1941 aa13.44□□□□□ -0.26
SMPD4-213ENST00000454468 ADAMTS7Q9UKP4 1686 aa13.44□□□□□ -0.26
SMPD4-213ENST00000454468 BBOX1O75936 387 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 TDP2O95551 362 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 TAL1P17542 331 aaPredicted RBP13.43□□□□□ -0.26
SMPD4-213ENST00000454468 ADCY7P51828 1080 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 COPB1P53618 953 aaKnown RBP13.43□□□□□ -0.26
SMPD4-213ENST00000454468 MDM2Q00987 491 aaPredicted RBP13.43□□□□□ -0.26
SMPD4-213ENST00000454468 MCM6Q14566 821 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 KRT79Q5XKE5 535 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 FBXO38Q6PIJ6 1188 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 KANSL2Q9H9L4 492 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 PKD2L1Q9P0L9 805 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 SERPINB13Q9UIV8 391 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 NUP98P52948 1817 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 LAMB4A4D0S4 1761 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 MACROD2A1Z1Q3 448 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 USP17L15C9J2P7 530 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 USP17L13C9JLJ4 530 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 USP17L11C9JVI0 530 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 USP17L18D6R9N7 530 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 USP17L22D6RA61 530 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 USP17L17D6RBQ6 530 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 USP17L19D6RCP7 530 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 USP17L20D6RJB6 530 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 SEC31AO94979 1220 aaKnown RBP13.43□□□□□ -0.26
SMPD4-213ENST00000454468 FCER1AP12319 257 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 ERCC5P28715 1186 aaPredicted RBP13.43□□□□□ -0.26
SMPD4-213ENST00000454468 USP17L24Q0WX57 530 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 DPYDQ12882 1025 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 RBM26Q5T8P6 1007 aaKnown RBP13.43□□□□□ -0.26
SMPD4-213ENST00000454468 USP17L6PQ6QN14 398 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 HSD3B7Q9H2F3 369 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 TJP1Q07157 1748 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 ENC1O14682 589 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 GRM4Q14833 912 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 IL17AQ16552 155 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 TDRD12Q587J7 1177 aaKnown RBP13.43□□□□□ -0.26
SMPD4-213ENST00000454468 FKBP15Q5T1M5 1219 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 KRT25Q7Z3Z0 450 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 NOC4LQ9BVI4 516 aaKnown RBP13.43□□□□□ -0.26
SMPD4-213ENST00000454468 BAZ2AQ9UIF9 1905 aaKnown RBP13.43□□□□□ -0.26
SMPD4-213ENST00000454468 TOGARAM1Q9Y4F4 1720 aa13.43□□□□□ -0.26
SMPD4-213ENST00000454468 CLRN2A0PK11 232 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 PSDA5PKW4 1024 aaPredicted RBP13.42□□□□□ -0.26
SMPD4-213ENST00000454468 LONP1P36776 959 aaKnown RBP13.42□□□□□ -0.26
SMPD4-213ENST00000454468 FXR1P51114 621 aaKnown RBP eCLIP13.42□□□□□ -0.26
SMPD4-213ENST00000454468 NFIAQ12857 509 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 TC2NQ8N9U0 490 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 TBC1D22AQ8WUA7 517 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 TEKT1Q969V4 418 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 BMP2KQ9NSY1 1161 aaPredicted RBP13.42□□□□□ -0.26
SMPD4-213ENST00000454468 ROBO1Q9Y6N7 1651 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 TFRCP02786 760 aaKnown RBP13.42□□□□□ -0.26
SMPD4-213ENST00000454468 UBXN2AP68543 259 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 PPP2R3AQ06190 1150 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 CCDC40Q4G0X9 1142 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 SBK1Q52WX2 424 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 SV2BQ7L1I2 683 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 CACNA2D4Q7Z3S7 1137 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 ZNF397Q8NF99 534 aaPredicted RBP13.42□□□□□ -0.26
SMPD4-213ENST00000454468 RTFDC1Q9BY42 306 aaPredicted RBP13.42□□□□□ -0.26
SMPD4-213ENST00000454468 BARHL2Q9NY43 387 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 LAMA4Q16363 1823 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 USP17L10C9JJH3 530 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 CHMP2AO43633 222 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 NYAP1Q6ZVC0 841 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 CRACR2AQ9BSW2 395 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 SLIT2O94813 1529 aa13.42□□□□□ -0.26
SMPD4-213ENST00000454468 CHRNA5P30532 468 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 AMPD3Q01432 767 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 DDR1Q08345 913 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 SHROOM1Q2M3G4 852 aaPredicted RBP13.41□□□□□ -0.26
SMPD4-213ENST00000454468 TCERG1LQ5VWI1 586 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 CNGA4Q8IV77 575 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 MTA3Q9BTC8 594 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 RAB34Q9BZG1 259 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 MYH14Q7Z406 1995 aaKnown RBP13.41□□□□□ -0.26
SMPD4-213ENST00000454468 TCP10L2B9ZVM9 353 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 FAM193AP78312 1265 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 SPAG1Q07617 926 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 ANKRD13CQ8N6S4 541 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 GDAP1L1Q96MZ0 367 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 PLEKHA4Q9H4M7 779 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 MRPL44Q9H9J2 332 aaKnown RBP13.41□□□□□ -0.26
SMPD4-213ENST00000454468 PPP1R3GB7ZBB8 358 aa13.41□□□□□ -0.26
SMPD4-213ENST00000454468 STXBP3O00186 592 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms