RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 TACO1Q9BSH4 297 aaKnown RBP13.23□□□□□ -0.29
SEC16A-207ENST00000453963 CARD10Q9BWT7 1032 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 TMOD4Q9NZQ9 345 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.23□□□□□ -0.29
SEC16A-207ENST00000453963 PTCH1Q13635 1447 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 HARSP12081 509 aaKnown RBP13.23□□□□□ -0.29
SEC16A-207ENST00000453963 TPD52P55327 224 aaPredicted RBP13.23□□□□□ -0.29
SEC16A-207ENST00000453963 ARMC9Q7Z3E5 817 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 LOC102724428A0A0B4J2F2 783 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 DDAH1O94760 285 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 LUC7L3O95232 432 aaKnown RBP13.23□□□□□ -0.29
SEC16A-207ENST00000453963 SIK1P57059 783 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 ZYXQ15942 572 aaKnown RBP13.23□□□□□ -0.29
SEC16A-207ENST00000453963 APOA5Q6Q788 366 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 FNBP4Q8N3X1 1017 aaPredicted RBP13.23□□□□□ -0.29
SEC16A-207ENST00000453963 SMC1BQ8NDV3 1235 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 FLAD1Q8NFF5 587 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 CHMP2AO43633 222 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 LARGE1O95461 756 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 ITIH3Q06033 890 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 NECTIN1Q15223 517 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 MFSD14BQ5SR56 506 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 TBC1D31Q96DN5 1066 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 METTL14Q9HCE5 456 aaKnown RBP13.23□□□□□ -0.29
SEC16A-207ENST00000453963 ATP8A2Q9NTI2 1148 aa13.23□□□□□ -0.29
SEC16A-207ENST00000453963 ENC1O14682 589 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 TRIM37O94972 964 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 PCP11498 1178 aaKnown RBP13.22□□□□□ -0.29
SEC16A-207ENST00000453963 TCP10Q12799 353 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 SF3A3Q12874 501 aaKnown RBP eCLIP13.22□□□□□ -0.292e-7■■■■□ 20.3
SEC16A-207ENST00000453963 TRPC3Q13507 836 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 CASP8Q14790 479 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 DLGAP5Q15398 846 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 MUM1Q2TAK8 710 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 GRK7Q8WTQ7 553 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 DHTKD1Q96HY7 919 aaPredicted RBP13.22□□□□□ -0.29
SEC16A-207ENST00000453963 DPH5Q9H2P9 285 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 JRKLQ9Y4A0 524 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 SLFN14P0C7P3 912 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 GTF2IP78347 998 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 IFT88Q13099 833 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 KCTD16Q68DU8 428 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 ZNF589Q86UQ0 364 aaPredicted RBP13.22□□□□□ -0.29
SEC16A-207ENST00000453963 CCDC197Q8NCU1 140 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 TGFBRAP1Q8WUH2 860 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 RNF26Q9BY78 433 aaPredicted RBP13.22□□□□□ -0.29
SEC16A-207ENST00000453963 ECM2O94769 699 aaPredicted RBP13.22□□□□□ -0.29
SEC16A-207ENST00000453963 POLR2FP61218 127 aaKnown RBP13.22□□□□□ -0.29
SEC16A-207ENST00000453963 GOLGA8FQ08AF8 430 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 GOLGA8DPQ0D2H9 430 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 STRN3Q13033 797 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 NIM1KQ8IY84 436 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 CMTR1Q8N1G2 835 aaKnown RBP13.22□□□□□ -0.29
SEC16A-207ENST00000453963 RUNDC3BQ96NL0 473 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 GBP5Q96PP8 586 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.22□□□□□ -0.29
SEC16A-207ENST00000453963 MAN1B1Q9UKM7 699 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 ODF2LQ9ULJ1 636 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 BZW2Q9Y6E2 419 aaKnown RBP13.22□□□□□ -0.29
SEC16A-207ENST00000453963 USP17L12C9JPN9 530 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 USP17L21D6R901 530 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 CASQ2O14958 399 aaPredicted RBP13.22□□□□□ -0.29
SEC16A-207ENST00000453963 TBC1D8O95759 1140 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 CLTAP09496 248 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 DCUN1D2Q6PH85 259 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 CNOT6LQ96LI5 555 aaKnown RBP13.22□□□□□ -0.29
SEC16A-207ENST00000453963 VPS37BQ9H9H4 285 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 PCDHB13Q9Y5F0 798 aa13.22□□□□□ -0.29
SEC16A-207ENST00000453963 MLH3Q9UHC1 1453 aa13.21□□□□□ -0.29
SEC16A-207ENST00000453963 PPIP5K2O43314 1243 aa13.21□□□□□ -0.29
SEC16A-207ENST00000453963 ARHGAP44Q17R89 818 aa13.21□□□□□ -0.29
SEC16A-207ENST00000453963 BRDTQ58F21 947 aaPredicted RBP13.21□□□□□ -0.29
SEC16A-207ENST00000453963 NEK8Q86SG6 692 aa13.21□□□□□ -0.29
SEC16A-207ENST00000453963 FAM114A2Q9NRY5 505 aa13.21□□□□□ -0.29
SEC16A-207ENST00000453963 TYW1Q9NV66 732 aaKnown RBP13.21□□□□□ -0.29
SEC16A-207ENST00000453963 BCAP29Q9UHQ4 241 aa13.21□□□□□ -0.29
SEC16A-207ENST00000453963 IRX4P78413 519 aa13.21□□□□□ -0.29
SEC16A-207ENST00000453963 RAD51AP2Q09MP3 1159 aa13.21□□□□□ -0.29
SEC16A-207ENST00000453963 PPP1R21Q6ZMI0 780 aa13.21□□□□□ -0.29
SEC16A-207ENST00000453963 FTOQ9C0B1 505 aaKnown RBP eCLIP13.21□□□□□ -0.29
SEC16A-207ENST00000453963 IGSF1Q8N6C5 1336 aa13.21□□□□□ -0.29
SEC16A-207ENST00000453963 TTC37Q6PGP7 1564 aa13.21□□□□□ -0.29
SEC16A-207ENST00000453963 SUN1O94901 812 aa13.21□□□□□ -0.3
SEC16A-207ENST00000453963 FMNL1O95466 1100 aaPredicted RBP13.21□□□□□ -0.3
SEC16A-207ENST00000453963 ABCB4P21439 1286 aa13.21□□□□□ -0.3
SEC16A-207ENST00000453963 EHHADHQ08426 723 aa13.21□□□□□ -0.3
SEC16A-207ENST00000453963 TARBP1Q13395 1621 aaKnown RBP13.21□□□□□ -0.3
SEC16A-207ENST00000453963 FAM47AQ5JRC9 791 aa13.21□□□□□ -0.3
SEC16A-207ENST00000453963 ALS2CLQ60I27 953 aa13.21□□□□□ -0.3
SEC16A-207ENST00000453963 NPHP4O75161 1426 aaPredicted RBP13.2□□□□□ -0.3
SEC16A-207ENST00000453963 MAP3K15Q6ZN16 1313 aa13.2□□□□□ -0.3
SEC16A-207ENST00000453963 LAD1O00515 517 aa13.2□□□□□ -0.3
SEC16A-207ENST00000453963 GPBP1Q86WP2 473 aa13.2□□□□□ -0.3
SEC16A-207ENST00000453963 ANKRD13CQ8N6S4 541 aa13.2□□□□□ -0.3
SEC16A-207ENST00000453963 KRT12Q99456 494 aa13.2□□□□□ -0.3
SEC16A-207ENST00000453963 ABCA8O94911 1581 aa13.2□□□□□ -0.3
SEC16A-207ENST00000453963 GMNNO75496 209 aa13.2□□□□□ -0.3
SEC16A-207ENST00000453963 HEXIM1O94992 359 aaKnown RBP13.2□□□□□ -0.3
SEC16A-207ENST00000453963 MYL1P05976 194 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms