RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 BMP3P12645 472 aa13.89□□□□□ -0.19
GARNL3-210ENST00000453030 STAT2P52630 851 aa13.89□□□□□ -0.19
GARNL3-210ENST00000453030 FPGSQ05932 587 aa13.89□□□□□ -0.19
GARNL3-210ENST00000453030 PDE4BQ07343 736 aa13.89□□□□□ -0.19
GARNL3-210ENST00000453030 PPARAQ07869 468 aa13.89□□□□□ -0.19
GARNL3-210ENST00000453030 FAAP100Q0VG06 881 aa13.89□□□□□ -0.19
GARNL3-210ENST00000453030 ARMCX2Q7L311 632 aa13.89□□□□□ -0.19
GARNL3-210ENST00000453030 ZNF467Q7Z7K2 595 aaPredicted RBP13.89□□□□□ -0.19
GARNL3-210ENST00000453030 KLHDC9Q8NEP7 349 aa13.89□□□□□ -0.19
GARNL3-210ENST00000453030 PI4K2BQ8TCG2 481 aa13.89□□□□□ -0.19
GARNL3-210ENST00000453030 NUP133Q8WUM0 1156 aa13.89□□□□□ -0.19
GARNL3-210ENST00000453030 MYLIPQ8WY64 445 aa13.89□□□□□ -0.19
GARNL3-210ENST00000453030 TSEN34Q9BSV6 310 aaKnown RBP13.89□□□□□ -0.19
GARNL3-210ENST00000453030 SEMA6BQ9H3T3 888 aa13.89□□□□□ -0.19
GARNL3-210ENST00000453030 FBXO40Q9UH90 709 aa13.89□□□□□ -0.19
GARNL3-210ENST00000453030 DCDC2CA8MYV0 355 aa13.88□□□□□ -0.19
GARNL3-210ENST00000453030 TMEM232C9JQI7 657 aa13.88□□□□□ -0.19
GARNL3-210ENST00000453030 SLC3A2P08195 630 aaKnown RBP13.88□□□□□ -0.19
GARNL3-210ENST00000453030 OAZ1P54368 228 aa13.88□□□□□ -0.19
GARNL3-210ENST00000453030 TFAP4Q01664 338 aa13.88□□□□□ -0.19
GARNL3-210ENST00000453030 CNTN2Q02246 1040 aa13.88□□□□□ -0.19
GARNL3-210ENST00000453030 CCDC144BQ3MJ40 725 aa13.88□□□□□ -0.19
GARNL3-210ENST00000453030 CCDC129Q6ZRS4 1044 aa13.88□□□□□ -0.19
GARNL3-210ENST00000453030 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.88□□□□□ -0.19
GARNL3-210ENST00000453030 RASGRP2Q7LDG7 609 aa13.88□□□□□ -0.19
GARNL3-210ENST00000453030 ANKRD33Q7Z3H0 272 aa13.88□□□□□ -0.19
GARNL3-210ENST00000453030 CCDC144CPQ8IYA2 1237 aa13.88□□□□□ -0.19
GARNL3-210ENST00000453030 CHST13Q8NET6 341 aa13.88□□□□□ -0.19
GARNL3-210ENST00000453030 NEDD1Q8NHV4 660 aa13.88□□□□□ -0.19
GARNL3-210ENST00000453030 MAFAQ8NHW3 353 aaPredicted RBP13.88□□□□□ -0.19
GARNL3-210ENST00000453030 MKL1Q969V6 931 aa13.88□□□□□ -0.19
GARNL3-210ENST00000453030 GLT1D1Q96MS3 346 aa13.88□□□□□ -0.19
GARNL3-210ENST00000453030 COL25A1Q9BXS0 654 aaPredicted RBP13.88□□□□□ -0.19
GARNL3-210ENST00000453030 ABHD16BQ9H3Z7 469 aa13.88□□□□□ -0.19
GARNL3-210ENST00000453030 SYNPO2Q9UMS6 1093 aa13.88□□□□□ -0.19
GARNL3-210ENST00000453030 ASGR1P07306 291 aa13.87□□□□□ -0.19
GARNL3-210ENST00000453030 CST5P28325 142 aaPredicted RBP13.87□□□□□ -0.19
GARNL3-210ENST00000453030 SLC1A4P43007 532 aa13.87□□□□□ -0.19
GARNL3-210ENST00000453030 ZMYM1Q5SVZ6 1142 aa13.87□□□□□ -0.19
GARNL3-210ENST00000453030 CCSAPQ6IQ19 270 aaPredicted RBP13.87□□□□□ -0.19
GARNL3-210ENST00000453030 VTI1AQ96AJ9 217 aa13.87□□□□□ -0.19
GARNL3-210ENST00000453030 AGBL1Q96MI9 1066 aa13.87□□□□□ -0.19
GARNL3-210ENST00000453030 ACAD9Q9H845 621 aa13.87□□□□□ -0.19
GARNL3-210ENST00000453030 SPC25Q9HBM1 224 aa13.87□□□□□ -0.19
GARNL3-210ENST00000453030 RNF146Q9NTX7 359 aa13.87□□□□□ -0.19
GARNL3-210ENST00000453030 STX8Q9UNK0 236 aa13.87□□□□□ -0.19
GARNL3-210ENST00000453030 MTMR7Q9Y216 660 aa13.87□□□□□ -0.19
GARNL3-210ENST00000453030 PCDHB15Q9Y5E8 787 aa13.87□□□□□ -0.19
GARNL3-210ENST00000453030 TTC28Q96AY4 2481 aa13.86□□□□□ -0.19
GARNL3-210ENST00000453030 TSPY2A6NKD2 308 aa13.86□□□□□ -0.19
GARNL3-210ENST00000453030 FOSL2P15408 326 aa13.86□□□□□ -0.19
GARNL3-210ENST00000453030 MX1P20591 662 aa13.86□□□□□ -0.19
GARNL3-210ENST00000453030 MCCP23508 829 aa13.86□□□□□ -0.19
GARNL3-210ENST00000453030 SNAP25P60880 206 aa13.86□□□□□ -0.19
GARNL3-210ENST00000453030 CTDSPL2Q05D32 466 aa13.86□□□□□ -0.19
GARNL3-210ENST00000453030 CCDC174Q6PII3 467 aa13.86□□□□□ -0.19
GARNL3-210ENST00000453030 KCTD1Q719H9 257 aa13.86□□□□□ -0.19
GARNL3-210ENST00000453030 NOL8Q76FK4 1167 aaKnown RBP13.86□□□□□ -0.19
GARNL3-210ENST00000453030 PCSK9Q8NBP7 692 aaKnown RBP13.86□□□□□ -0.19
GARNL3-210ENST00000453030 GMCL1Q96IK5 515 aa13.86□□□□□ -0.19
GARNL3-210ENST00000453030 TOX2Q96NM4 488 aa13.86□□□□□ -0.19
GARNL3-210ENST00000453030 UPF3AQ9H1J1 476 aaKnown RBP13.86□□□□□ -0.19
GARNL3-210ENST00000453030 A1CFQ9NQ94 594 aaKnown RBP13.86□□□□□ -0.19
GARNL3-210ENST00000453030 TBX21Q9UL17 535 aa13.86□□□□□ -0.19
GARNL3-210ENST00000453030 DDX49Q9Y6V7 483 aaKnown RBP13.86□□□□□ -0.19
GARNL3-210ENST00000453030 CHD9Q3L8U1 2897 aa13.86□□□□□ -0.19
GARNL3-210ENST00000453030 ZNF536O15090 1300 aa13.86□□□□□ -0.19
GARNL3-210ENST00000453030 ELP1O95163 1332 aa13.86□□□□□ -0.19
GARNL3-210ENST00000453030 MROH7Q68CQ1 1323 aa13.86□□□□□ -0.19
GARNL3-210ENST00000453030 MYH6P13533 1939 aa13.86□□□□□ -0.19
GARNL3-210ENST00000453030 A0A0U1RQG5 324 aaPredicted RBP13.85□□□□□ -0.19
GARNL3-210ENST00000453030 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.85□□□□□ -0.19
GARNL3-210ENST00000453030 FOXP2O15409 715 aa13.85□□□□□ -0.19
GARNL3-210ENST00000453030 NMT2O60551 498 aa13.85□□□□□ -0.19
GARNL3-210ENST00000453030 TIMP1P01033 207 aa13.85□□□□□ -0.19
GARNL3-210ENST00000453030 ALAS1P13196 640 aa13.85□□□□□ -0.19
GARNL3-210ENST00000453030 DNAJB2P25686 324 aa13.85□□□□□ -0.19
GARNL3-210ENST00000453030 GJA9P57773 515 aa13.85□□□□□ -0.19
GARNL3-210ENST00000453030 BEX3Q00994 111 aa13.85□□□□□ -0.19
GARNL3-210ENST00000453030 GNASQ5JWF2 1037 aa13.85□□□□□ -0.19
GARNL3-210ENST00000453030 FAM160B2Q86V87 743 aa13.85□□□□□ -0.19
GARNL3-210ENST00000453030 FAM133AQ8N9E0 248 aa13.85□□□□□ -0.19
GARNL3-210ENST00000453030 CHURC1Q8WUH1 139 aa13.85□□□□□ -0.19
GARNL3-210ENST00000453030 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.85□□□□□ -0.19
GARNL3-210ENST00000453030 PPP1R12CQ9BZL4 782 aa13.85□□□□□ -0.19
GARNL3-210ENST00000453030 KATNBL1Q9H079 304 aa13.85□□□□□ -0.19
GARNL3-210ENST00000453030 INCENPQ9NQS7 918 aa13.85□□□□□ -0.19
GARNL3-210ENST00000453030 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.85□□□□□ -0.19
GARNL3-210ENST00000453030 LAMA4Q16363 1823 aa13.85□□□□□ -0.19
GARNL3-210ENST00000453030 SOWAHBA6NEL2 793 aa13.84□□□□□ -0.19
GARNL3-210ENST00000453030 FDX1P10109 184 aa13.84□□□□□ -0.19
GARNL3-210ENST00000453030 PTGS1P23219 599 aa13.84□□□□□ -0.19
GARNL3-210ENST00000453030 CCDC96Q2M329 555 aa13.84□□□□□ -0.19
GARNL3-210ENST00000453030 TLK2Q86UE8 772 aa13.84□□□□□ -0.19
GARNL3-210ENST00000453030 STAG1Q8WVM7 1258 aa13.84□□□□□ -0.19
GARNL3-210ENST00000453030 TRERF1Q96PN7 1200 aa13.84□□□□□ -0.19
GARNL3-210ENST00000453030 CHD7Q9P2D1 2997 aa13.84□□□□□ -0.19
GARNL3-210ENST00000453030 ASTN1O14525 1302 aa13.84□□□□□ -0.19
GARNL3-210ENST00000453030 MUC3AQ02505 3323 aa13.83□□□□□ -0.2
GARNL3-210ENST00000453030 TMEM265A0A087WTH1 108 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms