RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 STK32BQ9NY57 414 aa15.3■□□□□ 0.04
ITGB4-202ENST00000449880 CTTNBP2NLQ9P2B4 639 aa15.3■□□□□ 0.04
ITGB4-202ENST00000449880 HIBADHP31937 336 aaKnown RBP15.3■□□□□ 0.04
ITGB4-202ENST00000449880 PHBP35232 272 aa15.3■□□□□ 0.04
ITGB4-202ENST00000449880 PEX19P40855 299 aa15.3■□□□□ 0.04
ITGB4-202ENST00000449880 RRAGAQ7L523 313 aa15.3■□□□□ 0.04
ITGB4-202ENST00000449880 NOSTRINQ8IVI9 506 aa15.3■□□□□ 0.04
ITGB4-202ENST00000449880 HOOK2Q96ED9 719 aa15.3■□□□□ 0.04
ITGB4-202ENST00000449880 TXLNGQ9NUQ3 528 aa15.3■□□□□ 0.04
ITGB4-202ENST00000449880 ZBTB21Q9ULJ3 1066 aa15.3■□□□□ 0.04
ITGB4-202ENST00000449880 BCRP11274 1271 aa15.29■□□□□ 0.04
ITGB4-202ENST00000449880 RAD51AP2Q09MP3 1159 aa15.29■□□□□ 0.04
ITGB4-202ENST00000449880 JPH2Q9BR39 696 aaPredicted RBP15.29■□□□□ 0.04
ITGB4-202ENST00000449880 TMOD4Q9NZQ9 345 aa15.29■□□□□ 0.04
ITGB4-202ENST00000449880 DKC1O60832 514 aaKnown RBP eCLIP15.29■□□□□ 0.04
ITGB4-202ENST00000449880 FAM98CQ17RN3 349 aaKnown RBP15.29■□□□□ 0.04
ITGB4-202ENST00000449880 ARHGEF10LQ9HCE6 1279 aa15.29■□□□□ 0.04
ITGB4-202ENST00000449880 PCCAP05165 728 aaPredicted RBP15.29■□□□□ 0.04
ITGB4-202ENST00000449880 SLC8A3P57103 927 aa15.29■□□□□ 0.04
ITGB4-202ENST00000449880 RNASE9P60153 205 aaKnown RBP15.29■□□□□ 0.04
ITGB4-202ENST00000449880 EMBQ6PCB8 327 aa15.29■□□□□ 0.04
ITGB4-202ENST00000449880 GDAP1L1Q96MZ0 367 aa15.29■□□□□ 0.04
ITGB4-202ENST00000449880 SCOCQ9UIL1 159 aa15.29■□□□□ 0.04
ITGB4-202ENST00000449880 JAG2Q9Y219 1238 aa15.29■□□□□ 0.04
ITGB4-202ENST00000449880 NDUFA8P51970 172 aa15.29■□□□□ 0.04
ITGB4-202ENST00000449880 ITIH3Q06033 890 aa15.29■□□□□ 0.04
ITGB4-202ENST00000449880 RASIP1Q5U651 963 aa15.29■□□□□ 0.04
ITGB4-202ENST00000449880 BIN2Q9UBW5 565 aaPredicted RBP15.29■□□□□ 0.04
ITGB4-202ENST00000449880 KAT6BQ8WYB5 2073 aa15.29■□□□□ 0.04
ITGB4-202ENST00000449880 ZNF532Q9HCE3 1301 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 TXNDC9O14530 226 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 HSPA1LP34931 641 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 LRRC23Q53EV4 343 aaPredicted RBP15.28■□□□□ 0.04
ITGB4-202ENST00000449880 GSDMAQ96QA5 445 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 ADCY9O60503 1353 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 WDR17Q8IZU2 1322 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 EIF3CLB5ME19 914 aaKnown RBP15.28■□□□□ 0.04
ITGB4-202ENST00000449880 MAN1A1P33908 653 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 WDR44Q5JSH3 913 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 FNBP1Q96RU3 617 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 EIF3CQ99613 913 aaKnown RBP15.28■□□□□ 0.04
ITGB4-202ENST00000449880 PIK3C2BO00750 1634 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 EEF1GP26641 437 aaKnown RBP15.28■□□□□ 0.04
ITGB4-202ENST00000449880 COPB1P53618 953 aaKnown RBP15.28■□□□□ 0.04
ITGB4-202ENST00000449880 SMTNP53814 917 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 OPHN1O60890 802 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 EIF3BP55884 814 aaKnown RBP15.28■□□□□ 0.04
ITGB4-202ENST00000449880 UAP1Q16222 522 aaPredicted RBP15.28■□□□□ 0.04
ITGB4-202ENST00000449880 SNX16P57768 344 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 PPP2R5AQ15172 486 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 UNC5CLQ8IV45 518 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 BPIFA3Q9BQP9 254 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 RCOR1Q9UKL0 485 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 PPP1R9AQ9ULJ8 1098 aa15.28■□□□□ 0.04
ITGB4-202ENST00000449880 KCNK3O14649 394 aa15.27■□□□□ 0.04
ITGB4-202ENST00000449880 GUCY2CP25092 1073 aa15.27■□□□□ 0.04
ITGB4-202ENST00000449880 CC2D1AQ6P1N0 951 aaPredicted RBP15.27■□□□□ 0.04
ITGB4-202ENST00000449880 MIER3Q7Z3K6 550 aa15.27■□□□□ 0.04
ITGB4-202ENST00000449880 INTS9Q9NV88 658 aaKnown RBP15.27■□□□□ 0.04
ITGB4-202ENST00000449880 NOP53Q9NZM5 478 aaKnown RBP15.27■□□□□ 0.04
ITGB4-202ENST00000449880 ADAM21Q9UKJ8 722 aa15.27■□□□□ 0.04
ITGB4-202ENST00000449880 UFL1O94874 794 aa15.27■□□□□ 0.04
ITGB4-202ENST00000449880 C11orf57Q6ZUT1 292 aaPredicted RBP15.27■□□□□ 0.04
ITGB4-202ENST00000449880 CCDC13Q8IYE1 715 aa15.27■□□□□ 0.04
ITGB4-202ENST00000449880 AGTPBP1Q9UPW5 1226 aa15.27■□□□□ 0.04
ITGB4-202ENST00000449880 BZW2Q9Y6E2 419 aaKnown RBP15.27■□□□□ 0.04
ITGB4-202ENST00000449880 NCAPD2Q15021 1401 aa15.27■□□□□ 0.03
ITGB4-202ENST00000449880 LMNAP02545 664 aaKnown RBP15.27■□□□□ 0.03
ITGB4-202ENST00000449880 IL9RQ01113 521 aa15.27■□□□□ 0.03
ITGB4-202ENST00000449880 SP4Q02446 784 aa15.27■□□□□ 0.03
ITGB4-202ENST00000449880 LETM2Q2VYF4 491 aa15.27■□□□□ 0.03
ITGB4-202ENST00000449880 LRRC24Q50LG9 513 aa15.27■□□□□ 0.03
ITGB4-202ENST00000449880 GLE1Q53GS7 698 aaKnown RBP15.27■□□□□ 0.03
ITGB4-202ENST00000449880 OTUD7BQ6GQQ9 843 aa15.27■□□□□ 0.03
ITGB4-202ENST00000449880 CABP7Q86V35 215 aa15.27■□□□□ 0.03
ITGB4-202ENST00000449880 SMC1BQ8NDV3 1235 aa15.27■□□□□ 0.03
ITGB4-202ENST00000449880 GABPB2Q8TAK5 448 aaPredicted RBP15.27■□□□□ 0.03
ITGB4-202ENST00000449880 NOD1Q9Y239 953 aa15.27■□□□□ 0.03
ITGB4-202ENST00000449880 PFDN1O60925 122 aa15.27■□□□□ 0.03
ITGB4-202ENST00000449880 NONOQ15233 471 aaKnown RBP eCLIP15.27■□□□□ 0.03
ITGB4-202ENST00000449880 ANKRD42Q8N9B4 389 aa15.27■□□□□ 0.03
ITGB4-202ENST00000449880 RUBCNQ92622 972 aa15.27■□□□□ 0.03
ITGB4-202ENST00000449880 TPX2Q9ULW0 747 aaKnown RBP15.27■□□□□ 0.03
ITGB4-202ENST00000449880 EXOC7Q9UPT5 735 aa15.27■□□□□ 0.03
ITGB4-202ENST00000449880 MAP3K15Q6ZN16 1313 aa15.27■□□□□ 0.03
ITGB4-202ENST00000449880 NRXN1Q9ULB1 1477 aa15.26■□□□□ 0.03
ITGB4-202ENST00000449880 SKIP12755 728 aa15.26■□□□□ 0.03
ITGB4-202ENST00000449880 RFC1P35251 1148 aaPredicted RBP15.26■□□□□ 0.03
ITGB4-202ENST00000449880 SLC39A14Q15043 492 aa15.26■□□□□ 0.03
ITGB4-202ENST00000449880 PLIN2Q99541 437 aa15.26■□□□□ 0.03
ITGB4-202ENST00000449880 FAF1Q9UNN5 650 aaPredicted RBP15.26■□□□□ 0.03
ITGB4-202ENST00000449880 ADGRL3Q9HAR2 1447 aa15.26■□□□□ 0.03
ITGB4-202ENST00000449880 AKNAD1Q5T1N1 836 aa15.26■□□□□ 0.03
ITGB4-202ENST00000449880 PLA2G4DQ86XP0 818 aa15.26■□□□□ 0.03
ITGB4-202ENST00000449880 PSMB7Q99436 277 aa15.26■□□□□ 0.03
ITGB4-202ENST00000449880 KDM3AQ9Y4C1 1321 aa15.26■□□□□ 0.03
ITGB4-202ENST00000449880 BIRC3Q13489 604 aa15.26■□□□□ 0.03
ITGB4-202ENST00000449880 TSPYL2Q9H2G4 693 aaPredicted RBP15.26■□□□□ 0.03
ITGB4-202ENST00000449880 CUEDC2Q9H467 287 aa15.26■□□□□ 0.03
ITGB4-202ENST00000449880 GGA1Q9UJY5 639 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms