RNA–Protein interactions for RNA: ENST00000448541.1

AC006003.1-201, humanhuman

TSL 4 BASIC

Gene AC006003.1, Length 613 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006003.1-201ENST00000448541 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.39■□□□□ 0.37
AC006003.1-201ENST00000448541 UPF3AQ9H1J1 476 aaKnown RBP17.39■□□□□ 0.37
AC006003.1-201ENST00000448541 HOMER2Q9NSB8 354 aa17.39■□□□□ 0.37
AC006003.1-201ENST00000448541 FEM1BQ9UK73 627 aa17.39■□□□□ 0.37
AC006003.1-201ENST00000448541 MYH4Q9Y623 1939 aa17.39■□□□□ 0.37
AC006003.1-201ENST00000448541 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.38■□□□□ 0.37
AC006003.1-201ENST00000448541 PATL2C9JE40 543 aaKnown RBP17.38■□□□□ 0.37
AC006003.1-201ENST00000448541 TTLL1O95922 423 aa17.38■□□□□ 0.37
AC006003.1-201ENST00000448541 PTGS1P23219 599 aa17.38■□□□□ 0.37
AC006003.1-201ENST00000448541 DNAJB2P25686 324 aa17.38■□□□□ 0.37
AC006003.1-201ENST00000448541 GJA9P57773 515 aa17.38■□□□□ 0.37
AC006003.1-201ENST00000448541 SLFN13Q68D06 897 aa17.38■□□□□ 0.37
AC006003.1-201ENST00000448541 CCDC144CPQ8IYA2 1237 aa17.38■□□□□ 0.37
AC006003.1-201ENST00000448541 CHST13Q8NET6 341 aa17.38■□□□□ 0.37
AC006003.1-201ENST00000448541 ABHD16BQ9H3Z7 469 aa17.38■□□□□ 0.37
AC006003.1-201ENST00000448541 CTDP1Q9Y5B0 961 aaPredicted RBP17.38■□□□□ 0.37
AC006003.1-201ENST00000448541 DDX49Q9Y6V7 483 aaKnown RBP17.38■□□□□ 0.37
AC006003.1-201ENST00000448541 ELP1O95163 1332 aa17.38■□□□□ 0.37
AC006003.1-201ENST00000448541 PLIN4Q96Q06 1357 aa17.38■□□□□ 0.37
AC006003.1-201ENST00000448541 TMEM265A0A087WTH1 108 aa17.37■□□□□ 0.37
AC006003.1-201ENST00000448541 ZFYP08048 801 aaPredicted RBP17.37■□□□□ 0.37
AC006003.1-201ENST00000448541 BMP3P12645 472 aa17.37■□□□□ 0.37
AC006003.1-201ENST00000448541 GNAT2P19087 354 aa17.37■□□□□ 0.37
AC006003.1-201ENST00000448541 OAZ1P54368 228 aa17.37■□□□□ 0.37
AC006003.1-201ENST00000448541 MFSD5Q6N075 450 aa17.37■□□□□ 0.37
AC006003.1-201ENST00000448541 RASGRP2Q7LDG7 609 aa17.37■□□□□ 0.37
AC006003.1-201ENST00000448541 USP38Q8NB14 1042 aa17.37■□□□□ 0.37
AC006003.1-201ENST00000448541 NEDD1Q8NHV4 660 aa17.37■□□□□ 0.37
AC006003.1-201ENST00000448541 OTUD7AQ8TE49 926 aaPredicted RBP17.37■□□□□ 0.37
AC006003.1-201ENST00000448541 AGBL1Q96MI9 1066 aa17.37■□□□□ 0.37
AC006003.1-201ENST00000448541 GLT1D1Q96MS3 346 aa17.37■□□□□ 0.37
AC006003.1-201ENST00000448541 SYNPO2Q9UMS6 1093 aa17.37■□□□□ 0.37
AC006003.1-201ENST00000448541 ASTN1O14525 1302 aa17.37■□□□□ 0.37
AC006003.1-201ENST00000448541 ZNF536O15090 1300 aa17.37■□□□□ 0.37
AC006003.1-201ENST00000448541 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.36■□□□□ 0.37
AC006003.1-201ENST00000448541 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.36■□□□□ 0.37
AC006003.1-201ENST00000448541 SOWAHBA6NEL2 793 aa17.36■□□□□ 0.37
AC006003.1-201ENST00000448541 GRXCR1A8MXD5 290 aa17.36■□□□□ 0.37
AC006003.1-201ENST00000448541 TMEM232C9JQI7 657 aa17.36■□□□□ 0.37
AC006003.1-201ENST00000448541 ARVCFO00192 962 aa17.36■□□□□ 0.37
AC006003.1-201ENST00000448541 FOXP2O15409 715 aa17.36■□□□□ 0.37
AC006003.1-201ENST00000448541 BEX3Q00994 111 aa17.36■□□□□ 0.37
AC006003.1-201ENST00000448541 TFAP4Q01664 338 aa17.36■□□□□ 0.37
AC006003.1-201ENST00000448541 GNASQ5JWF2 1037 aa17.36■□□□□ 0.37
AC006003.1-201ENST00000448541 TMEM240Q5SV17 173 aa17.36■□□□□ 0.37
AC006003.1-201ENST00000448541 FAM126BQ8IXS8 530 aa17.36■□□□□ 0.37
AC006003.1-201ENST00000448541 FAM133AQ8N9E0 248 aa17.36■□□□□ 0.37
AC006003.1-201ENST00000448541 PCSK9Q8NBP7 692 aaKnown RBP17.36■□□□□ 0.37
AC006003.1-201ENST00000448541 PI4K2BQ8TCG2 481 aa17.36■□□□□ 0.37
AC006003.1-201ENST00000448541 GPATCH3Q96I76 525 aa17.36■□□□□ 0.37
AC006003.1-201ENST00000448541 FBXO40Q9UH90 709 aa17.36■□□□□ 0.37
AC006003.1-201ENST00000448541 A0A0U1RQG5 324 aaPredicted RBP17.35■□□□□ 0.37
AC006003.1-201ENST00000448541 TSPY3P0CV98 308 aa17.35■□□□□ 0.37
AC006003.1-201ENST00000448541 TSPY8P0CW00 308 aa17.35■□□□□ 0.37
AC006003.1-201ENST00000448541 ACRP10323 421 aa17.35■□□□□ 0.37
AC006003.1-201ENST00000448541 CSF2RAP15509 400 aa17.35■□□□□ 0.37
AC006003.1-201ENST00000448541 PBX2P40425 430 aa17.35■□□□□ 0.37
AC006003.1-201ENST00000448541 SNAP25P60880 206 aa17.35■□□□□ 0.37
AC006003.1-201ENST00000448541 NKX3-2P78367 333 aa17.35■□□□□ 0.37
AC006003.1-201ENST00000448541 RASIP1Q5U651 963 aa17.35■□□□□ 0.37
AC006003.1-201ENST00000448541 VTI1AQ96AJ9 217 aa17.35■□□□□ 0.37
AC006003.1-201ENST00000448541 PPP1R12CQ9BZL4 782 aa17.35■□□□□ 0.37
AC006003.1-201ENST00000448541 ZNF576Q9H609 170 aa17.35■□□□□ 0.37
AC006003.1-201ENST00000448541 ZNF287Q9HBT7 754 aa17.35■□□□□ 0.37
AC006003.1-201ENST00000448541 A1CFQ9NQ94 594 aaKnown RBP17.35■□□□□ 0.37
AC006003.1-201ENST00000448541 INCENPQ9NQS7 918 aa17.35■□□□□ 0.37
AC006003.1-201ENST00000448541 MCM3APO60318 1980 aa17.35■□□□□ 0.37
AC006003.1-201ENST00000448541 PPARAQ07869 468 aa17.34■□□□□ 0.37
AC006003.1-201ENST00000448541 TMEM63BQ5T3F8 832 aa17.34■□□□□ 0.37
AC006003.1-201ENST00000448541 MROH7Q68CQ1 1323 aa17.34■□□□□ 0.37
AC006003.1-201ENST00000448541 TIFAQ96CG3 184 aa17.34■□□□□ 0.37
AC006003.1-201ENST00000448541 ACAD9Q9H845 621 aa17.34■□□□□ 0.37
AC006003.1-201ENST00000448541 SPC25Q9HBM1 224 aa17.34■□□□□ 0.37
AC006003.1-201ENST00000448541 RNF146Q9NTX7 359 aa17.34■□□□□ 0.37
AC006003.1-201ENST00000448541 GNEQ9Y223 722 aaKnown RBP17.34■□□□□ 0.37
AC006003.1-201ENST00000448541 MUC3AQ02505 3323 aa17.34■□□□□ 0.37
AC006003.1-201ENST00000448541 LRRC37A2A6NM11 1700 aa17.33■□□□□ 0.37
AC006003.1-201ENST00000448541 UMODL1Q5DID0 1318 aa17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 NMT2O60551 498 aa17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 CD4P01730 458 aa17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 MCCP23508 829 aa17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 STAT2P52630 851 aa17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 PDE4BQ07343 736 aa17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 PPIGQ13427 754 aaKnown RBP eCLIP17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 MUM1L1Q5H9M0 696 aa17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 ZMYM1Q5SVZ6 1142 aa17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 CCDC129Q6ZRS4 1044 aa17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 KCTD1Q719H9 257 aa17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 STAG1Q8WVM7 1258 aa17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 GMCL1Q96IK5 515 aa17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 PURBQ96QR8 312 aaKnown RBP17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 PBX4Q9BYU1 374 aa17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 NAPBQ9H115 298 aa17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 IL17RBQ9NRM6 502 aa17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 ISY1Q9ULR0 285 aaKnown RBP17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 CHD7Q9P2D1 2997 aa17.33■□□□□ 0.36
AC006003.1-201ENST00000448541 GRIN2DO15399 1336 aa17.32■□□□□ 0.36
AC006003.1-201ENST00000448541 TTC41PQ6P2S7 1318 aa17.32■□□□□ 0.36
AC006003.1-201ENST00000448541 CYP2C18P33260 490 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms