RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 PPP1R11O60927 126 aaPredicted RBP22.5■■□□□ 1.19
SGCE-207ENST00000447873 HOXA7P31268 230 aaPredicted RBP22.5■■□□□ 1.19
SGCE-207ENST00000447873 NAPAP54920 295 aa22.5■■□□□ 1.19
SGCE-207ENST00000447873 PABPC4Q13310 644 aaKnown RBP eCLIP22.5■■□□□ 1.19
SGCE-207ENST00000447873 MOGSQ13724 837 aa22.5■■□□□ 1.19
SGCE-207ENST00000447873 MCTP1Q6DN14 999 aa22.5■■□□□ 1.19
SGCE-207ENST00000447873 MS4A4AQ96JQ5 239 aa22.5■■□□□ 1.19
SGCE-207ENST00000447873 AMNQ9BXJ7 453 aa22.5■■□□□ 1.19
SGCE-207ENST00000447873 HOXC10Q9NYD6 342 aa22.5■■□□□ 1.19
SGCE-207ENST00000447873 CTDP1Q9Y5B0 961 aaPredicted RBP22.5■■□□□ 1.19
SGCE-207ENST00000447873 CCL15-CCL14A0A0B4J2E2 113 aa22.49■■□□□ 1.19
SGCE-207ENST00000447873 FDX1P10109 184 aa22.49■■□□□ 1.19
SGCE-207ENST00000447873 DSG3P32926 999 aa22.49■■□□□ 1.19
SGCE-207ENST00000447873 NLRP5P59047 1200 aa22.49■■□□□ 1.19
SGCE-207ENST00000447873 SAFBQ15424 915 aaKnown RBP eCLIP22.49■■□□□ 1.19
SGCE-207ENST00000447873 CCL15Q16663 113 aa22.49■■□□□ 1.19
SGCE-207ENST00000447873 CCDC174Q6PII3 467 aa22.49■■□□□ 1.19
SGCE-207ENST00000447873 FBXO11Q86XK2 927 aa22.49■■□□□ 1.19
SGCE-207ENST00000447873 FAM177A1Q8N128 213 aaPredicted RBP22.49■■□□□ 1.19
SGCE-207ENST00000447873 COA7Q96BR5 231 aa22.49■■□□□ 1.19
SGCE-207ENST00000447873 PHF20Q9BVI0 1012 aa22.49■■□□□ 1.19
SGCE-207ENST00000447873 PCDHA1Q9Y5I3 950 aa22.49■■□□□ 1.19
SGCE-207ENST00000447873 MYPNQ86TC9 1320 aa22.48■■□□□ 1.19
SGCE-207ENST00000447873 ZBED4O75132 1171 aa22.48■■□□□ 1.19
SGCE-207ENST00000447873 MMP1P03956 469 aa22.48■■□□□ 1.19
SGCE-207ENST00000447873 IRX3P78415 501 aaPredicted RBP22.48■■□□□ 1.19
SGCE-207ENST00000447873 TRAF1Q13077 416 aa22.48■■□□□ 1.19
SGCE-207ENST00000447873 TYW1BQ6NUM6 668 aa22.48■■□□□ 1.19
SGCE-207ENST00000447873 SHISA4Q96DD7 197 aa22.48■■□□□ 1.19
SGCE-207ENST00000447873 ATG4CQ96DT6 458 aa22.48■■□□□ 1.19
SGCE-207ENST00000447873 SLC38A10Q9HBR0 1119 aa22.48■■□□□ 1.19
SGCE-207ENST00000447873 VWA5AO00534 786 aa22.47■■□□□ 1.19
SGCE-207ENST00000447873 F13A1P00488 732 aa22.47■■□□□ 1.19
SGCE-207ENST00000447873 FERMT3Q86UX7 667 aa22.47■■□□□ 1.19
SGCE-207ENST00000447873 CCDC102AQ96A19 550 aa22.47■■□□□ 1.19
SGCE-207ENST00000447873 HHIPL1Q96JK4 782 aa22.47■■□□□ 1.19
SGCE-207ENST00000447873 CALML3P27482 149 aa22.46■■□□□ 1.19
SGCE-207ENST00000447873 GNL2Q13823 731 aaKnown RBP22.46■■□□□ 1.19
SGCE-207ENST00000447873 USH1GQ495M9 461 aa22.46■■□□□ 1.19
SGCE-207ENST00000447873 GPAT2Q6NUI2 795 aa22.46■■□□□ 1.19
SGCE-207ENST00000447873 PPP1R18Q6NYC8 613 aa22.46■■□□□ 1.19
SGCE-207ENST00000447873 ADAMTS5Q9UNA0 930 aa22.46■■□□□ 1.19
SGCE-207ENST00000447873 COL11A1P12107 1806 aaPredicted RBP22.46■■□□□ 1.19
SGCE-207ENST00000447873 SPDYE16A6NNV3 312 aaPredicted RBP22.46■■□□□ 1.19
SGCE-207ENST00000447873 SLC10A3P09131 477 aa22.46■■□□□ 1.19
SGCE-207ENST00000447873 OSBPP22059 807 aa22.46■■□□□ 1.19
SGCE-207ENST00000447873 DIS3L2Q8IYB7 885 aaKnown RBP22.46■■□□□ 1.19
SGCE-207ENST00000447873 BRI3BPQ8WY22 251 aa22.46■■□□□ 1.19
SGCE-207ENST00000447873 ASCC2Q9H1I8 757 aaPredicted RBP22.46■■□□□ 1.19
SGCE-207ENST00000447873 BRMS1Q9HCU9 246 aa22.46■■□□□ 1.19
SGCE-207ENST00000447873 SMCO2A6NFE2 343 aa22.45■■□□□ 1.18
SGCE-207ENST00000447873 ICAM1P05362 532 aa22.45■■□□□ 1.18
SGCE-207ENST00000447873 GNA11P29992 359 aa22.45■■□□□ 1.18
SGCE-207ENST00000447873 KRT2P35908 639 aa22.45■■□□□ 1.18
SGCE-207ENST00000447873 APLP1P51693 650 aa22.45■■□□□ 1.18
SGCE-207ENST00000447873 GALNT17Q6IS24 598 aa22.45■■□□□ 1.18
SGCE-207ENST00000447873 PAXIP1Q6ZW49 1069 aaPredicted RBP22.45■■□□□ 1.18
SGCE-207ENST00000447873 CPXCR1Q8N123 301 aa22.45■■□□□ 1.18
SGCE-207ENST00000447873 P2RX7Q99572 595 aaKnown RBP22.45■■□□□ 1.18
SGCE-207ENST00000447873 ZMYND12Q9H0C1 365 aa22.45■■□□□ 1.18
SGCE-207ENST00000447873 ZSCAN16Q9H4T2 348 aaPredicted RBP22.45■■□□□ 1.18
SGCE-207ENST00000447873 C6orf50Q9HD87 102 aa22.45■■□□□ 1.18
SGCE-207ENST00000447873 PNMA3Q9UL41 463 aa22.45■■□□□ 1.18
SGCE-207ENST00000447873 ESYT2A0FGR8 921 aa22.44■■□□□ 1.18
SGCE-207ENST00000447873 MANSC4A6NHS7 340 aaPredicted RBP22.44■■□□□ 1.18
SGCE-207ENST00000447873 KIF23Q02241 960 aaPredicted RBP22.44■■□□□ 1.18
SGCE-207ENST00000447873 TNPO1Q92973 898 aaKnown RBP22.44■■□□□ 1.18
SGCE-207ENST00000447873 CREBZFQ9NS37 354 aa22.44■■□□□ 1.18
SGCE-207ENST00000447873 PNMA2Q9UL42 364 aa22.44■■□□□ 1.18
SGCE-207ENST00000447873 CCPG1Q9ULG6 757 aa22.44■■□□□ 1.18
SGCE-207ENST00000447873 PCDHA4Q9UN74 947 aa22.44■■□□□ 1.18
SGCE-207ENST00000447873 SMCHD1A6NHR9 2005 aa22.44■■□□□ 1.18
SGCE-207ENST00000447873 ZNF536O15090 1300 aa22.43■■□□□ 1.18
SGCE-207ENST00000447873 BTBD18B2RXH4 712 aa22.43■■□□□ 1.18
SGCE-207ENST00000447873 BTBD19C9JJ37 291 aa22.43■■□□□ 1.18
SGCE-207ENST00000447873 ANKRD23Q86SG2 305 aa22.43■■□□□ 1.18
SGCE-207ENST00000447873 AGBL1Q96MI9 1066 aa22.43■■□□□ 1.18
SGCE-207ENST00000447873 FOXP1Q9H334 677 aaPredicted RBP22.43■■□□□ 1.18
SGCE-207ENST00000447873 RAVER2Q9HCJ3 691 aaKnown RBP22.43■■□□□ 1.18
SGCE-207ENST00000447873 SLC45A1Q9Y2W3 748 aa22.43■■□□□ 1.18
SGCE-207ENST00000447873 ATP6V1DQ9Y5K8 247 aa22.43■■□□□ 1.18
SGCE-207ENST00000447873 PDHXO00330 501 aa22.42■■□□□ 1.18
SGCE-207ENST00000447873 ADCY7P51828 1080 aa22.42■■□□□ 1.18
SGCE-207ENST00000447873 OAZ1P54368 228 aa22.42■■□□□ 1.18
SGCE-207ENST00000447873 HERVK_113P62684 666 aa22.42■■□□□ 1.18
SGCE-207ENST00000447873 RESTQ13127 1097 aa22.42■■□□□ 1.18
SGCE-207ENST00000447873 NPY5RQ15761 445 aa22.42■■□□□ 1.18
SGCE-207ENST00000447873 BLIDQ8IZY5 108 aa22.42■■□□□ 1.18
SGCE-207ENST00000447873 BICD2Q8TD16 824 aa22.42■■□□□ 1.18
SGCE-207ENST00000447873 OXER1Q8TDS5 423 aa22.42■■□□□ 1.18
SGCE-207ENST00000447873 ABCB11O95342 1321 aa22.42■■□□□ 1.18
SGCE-207ENST00000447873 TESPA1A2RU30 521 aaPredicted RBP22.42■■□□□ 1.18
SGCE-207ENST00000447873 FAM155AB1AL88 458 aaPredicted RBP22.42■■□□□ 1.18
SGCE-207ENST00000447873 TAL1P17542 331 aaPredicted RBP22.42■■□□□ 1.18
SGCE-207ENST00000447873 U2AF2P26368 475 aaKnown RBP eCLIP22.42■■□□□ 1.184e-7■■□□□ 11.5
SGCE-207ENST00000447873 MB21D1Q8N884 522 aa22.42■■□□□ 1.18
SGCE-207ENST00000447873 DAGLBQ8NCG7 672 aa22.42■■□□□ 1.18
SGCE-207ENST00000447873 REPS2Q8NFH8 660 aa22.42■■□□□ 1.18
SGCE-207ENST00000447873 PSTPIP2Q9H939 334 aa22.42■■□□□ 1.18
SGCE-207ENST00000447873 MRPL11Q9Y3B7 192 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms