RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 COL2A1P02458 1487 aaPredicted RBP22.11■■□□□ 1.13
FAM3A-215ENST00000447601 SERPINC1P01008 464 aa22.11■■□□□ 1.13
FAM3A-215ENST00000447601 ATP1A3P13637 1013 aa22.11■■□□□ 1.13
FAM3A-215ENST00000447601 TERF1P54274 439 aa22.11■■□□□ 1.13
FAM3A-215ENST00000447601 LETM2Q2VYF4 491 aa22.11■■□□□ 1.13
FAM3A-215ENST00000447601 DNTTIP2Q5QJE6 756 aaKnown RBP22.11■■□□□ 1.13
FAM3A-215ENST00000447601 PDGFDQ9GZP0 370 aaPredicted RBP22.11■■□□□ 1.13
FAM3A-215ENST00000447601 TDRD3Q9H7E2 651 aaKnown RBP22.11■■□□□ 1.13
FAM3A-215ENST00000447601 FANCLQ9NW38 375 aa22.11■■□□□ 1.13
FAM3A-215ENST00000447601 GTPBP6O43824 516 aaPredicted RBP22.1■■□□□ 1.13
FAM3A-215ENST00000447601 CCNT1O60563 726 aaKnown RBP22.1■■□□□ 1.13
FAM3A-215ENST00000447601 OR52Z1P0C646 297 aa22.1■■□□□ 1.13
FAM3A-215ENST00000447601 TMEM179Q6ZVK1 233 aa22.1■■□□□ 1.13
FAM3A-215ENST00000447601 DCAF4Q8WV16 495 aa22.1■■□□□ 1.13
FAM3A-215ENST00000447601 AK8Q96MA6 479 aa22.1■■□□□ 1.13
FAM3A-215ENST00000447601 GREB1LQ9C091 1923 aaPredicted RBP22.1■■□□□ 1.13
FAM3A-215ENST00000447601 STAT6P42226 847 aa22.1■■□□□ 1.13
FAM3A-215ENST00000447601 UBASH3AP57075 661 aa22.1■■□□□ 1.13
FAM3A-215ENST00000447601 RSBN1LQ6PCB5 846 aaPredicted RBP22.1■■□□□ 1.13
FAM3A-215ENST00000447601 TBCKQ8TEA7 893 aa22.1■■□□□ 1.13
FAM3A-215ENST00000447601 COA7Q96BR5 231 aa22.1■■□□□ 1.13
FAM3A-215ENST00000447601 DISC1Q9NRI5 854 aa22.1■■□□□ 1.13
FAM3A-215ENST00000447601 BIN2Q9UBW5 565 aaPredicted RBP22.1■■□□□ 1.13
FAM3A-215ENST00000447601 FAM196BA6NMK8 535 aa22.09■■□□□ 1.13
FAM3A-215ENST00000447601 EEF2P13639 858 aaKnown RBP22.09■■□□□ 1.13
FAM3A-215ENST00000447601 UBA7P41226 1012 aa22.09■■□□□ 1.13
FAM3A-215ENST00000447601 FMR1Q06787 632 aaKnown RBP eCLIP22.09■■□□□ 1.13
FAM3A-215ENST00000447601 JAKMIP3Q5VZ66 844 aa22.09■■□□□ 1.13
FAM3A-215ENST00000447601 CCDC150Q8NCX0 1101 aa22.09■■□□□ 1.13
FAM3A-215ENST00000447601 CCSER1Q9C0I3 900 aa22.09■■□□□ 1.13
FAM3A-215ENST00000447601 TMOD2Q9NZR1 351 aa22.09■■□□□ 1.13
FAM3A-215ENST00000447601 R3HCC1Q9Y3T6 440 aaKnown RBP22.09■■□□□ 1.13
FAM3A-215ENST00000447601 NFE2L3Q9Y4A8 694 aa22.09■■□□□ 1.13
FAM3A-215ENST00000447601 ZBTB5O15062 677 aa22.08■■□□□ 1.13
FAM3A-215ENST00000447601 SLURP2P0DP57 97 aa22.08■■□□□ 1.13
FAM3A-215ENST00000447601 TTBK2Q6IQ55 1244 aa22.08■■□□□ 1.13
FAM3A-215ENST00000447601 TMC6Q7Z403 805 aa22.08■■□□□ 1.13
FAM3A-215ENST00000447601 DEFB132Q7Z7B7 95 aa22.08■■□□□ 1.13
FAM3A-215ENST00000447601 LARGE2Q8N3Y3 721 aa22.08■■□□□ 1.13
FAM3A-215ENST00000447601 RASSF8Q8NHQ8 419 aa22.08■■□□□ 1.13
FAM3A-215ENST00000447601 MTMR8Q96EF0 704 aa22.08■■□□□ 1.13
FAM3A-215ENST00000447601 PRMT6Q96LA8 375 aaPredicted RBP22.08■■□□□ 1.13
FAM3A-215ENST00000447601 VPS33BQ9H267 617 aa22.08■■□□□ 1.13
FAM3A-215ENST00000447601 RIC8AQ9NPQ8 531 aa22.08■■□□□ 1.13
FAM3A-215ENST00000447601 MYH8P13535 1937 aa22.08■■□□□ 1.13
FAM3A-215ENST00000447601 ICA1Q05084 483 aa22.08■■□□□ 1.12
FAM3A-215ENST00000447601 KARSQ15046 597 aaKnown RBP22.08■■□□□ 1.12
FAM3A-215ENST00000447601 KCTD1Q719H9 257 aa22.08■■□□□ 1.12
FAM3A-215ENST00000447601 RMND1Q9NWS8 449 aa22.08■■□□□ 1.12
FAM3A-215ENST00000447601 HDAC9Q9UKV0 1011 aa22.08■■□□□ 1.12
FAM3A-215ENST00000447601 DPEP1P16444 411 aa22.07■■□□□ 1.12
FAM3A-215ENST00000447601 ZNF18P17022 549 aa22.07■■□□□ 1.12
FAM3A-215ENST00000447601 CASP1P29466 404 aa22.07■■□□□ 1.12
FAM3A-215ENST00000447601 SLC1A4P43007 532 aa22.07■■□□□ 1.12
FAM3A-215ENST00000447601 ABCB5Q2M3G0 1257 aa22.07■■□□□ 1.12
FAM3A-215ENST00000447601 RRAGBQ5VZM2 374 aa22.07■■□□□ 1.12
FAM3A-215ENST00000447601 TMEM260Q9NX78 707 aa22.07■■□□□ 1.12
FAM3A-215ENST00000447601 VIL1P09327 827 aaKnown RBP22.06■■□□□ 1.12
FAM3A-215ENST00000447601 CDC25AP30304 524 aa22.06■■□□□ 1.12
FAM3A-215ENST00000447601 SLC16A2P36021 539 aa22.06■■□□□ 1.12
FAM3A-215ENST00000447601 SEPT2Q15019 361 aa22.06■■□□□ 1.12
FAM3A-215ENST00000447601 SLFN13Q68D06 897 aa22.06■■□□□ 1.12
FAM3A-215ENST00000447601 SIPA1L1O43166 1804 aa22.06■■□□□ 1.12
FAM3A-215ENST00000447601 SPDYE2BA6NHP3 402 aa22.06■■□□□ 1.12
FAM3A-215ENST00000447601 USP17L10C9JJH3 530 aa22.06■■□□□ 1.12
FAM3A-215ENST00000447601 MYL1P05976 194 aa22.06■■□□□ 1.12
FAM3A-215ENST00000447601 SPDYE6P0CI01 402 aa22.06■■□□□ 1.12
FAM3A-215ENST00000447601 KCNA3P22001 575 aa22.06■■□□□ 1.12
FAM3A-215ENST00000447601 MRPL12P52815 198 aaKnown RBP22.06■■□□□ 1.12
FAM3A-215ENST00000447601 ARID5BQ14865 1188 aa22.06■■□□□ 1.12
FAM3A-215ENST00000447601 TRMT44Q8IYL2 757 aaKnown RBP22.06■■□□□ 1.12
FAM3A-215ENST00000447601 CUL5Q93034 780 aa22.06■■□□□ 1.12
FAM3A-215ENST00000447601 CSRNP1Q96S65 589 aa22.06■■□□□ 1.12
FAM3A-215ENST00000447601 MTRQ99707 1265 aa22.06■■□□□ 1.12
FAM3A-215ENST00000447601 GLT8D2Q9H1C3 349 aa22.06■■□□□ 1.12
FAM3A-215ENST00000447601 CUEDC2Q9H467 287 aa22.06■■□□□ 1.12
FAM3A-215ENST00000447601 MAGEF1Q9HAY2 307 aa22.06■■□□□ 1.12
FAM3A-215ENST00000447601 PPP1R11O60927 126 aaPredicted RBP22.05■■□□□ 1.12
FAM3A-215ENST00000447601 SKILP12757 684 aa22.05■■□□□ 1.12
FAM3A-215ENST00000447601 CDK11BP21127 795 aaKnown RBP22.05■■□□□ 1.12
FAM3A-215ENST00000447601 CUL4BQ13620 913 aa22.05■■□□□ 1.12
FAM3A-215ENST00000447601 OGFOD1Q8N543 542 aa22.05■■□□□ 1.12
FAM3A-215ENST00000447601 GMCL1P1Q8NEA9 526 aa22.05■■□□□ 1.12
FAM3A-215ENST00000447601 STAMQ92783 540 aa22.05■■□□□ 1.12
FAM3A-215ENST00000447601 BLZF1Q9H2G9 400 aa22.05■■□□□ 1.12
FAM3A-215ENST00000447601 ZNF277Q9NRM2 450 aaPredicted RBP22.05■■□□□ 1.12
FAM3A-215ENST00000447601 HERC5Q9UII4 1024 aaKnown RBP22.05■■□□□ 1.12
FAM3A-215ENST00000447601 SYNRGQ9UMZ2 1314 aa22.04■■□□□ 1.12
FAM3A-215ENST00000447601 PP2D1A8MPX8 630 aa22.04■■□□□ 1.12
FAM3A-215ENST00000447601 PSMD14O00487 310 aa22.04■■□□□ 1.12
FAM3A-215ENST00000447601 RAD21O60216 631 aa22.04■■□□□ 1.12
FAM3A-215ENST00000447601 RAD17O75943 681 aa22.04■■□□□ 1.12
FAM3A-215ENST00000447601 TPM2P07951 284 aa22.04■■□□□ 1.12
FAM3A-215ENST00000447601 DLGAP5Q15398 846 aa22.04■■□□□ 1.12
FAM3A-215ENST00000447601 RBM26Q5T8P6 1007 aaKnown RBP22.04■■□□□ 1.12
FAM3A-215ENST00000447601 SPATA1Q5VX52 437 aa22.04■■□□□ 1.12
FAM3A-215ENST00000447601 DPF2Q92785 391 aa22.04■■□□□ 1.12
FAM3A-215ENST00000447601 GMLQ99445 158 aa22.04■■□□□ 1.12
FAM3A-215ENST00000447601 NRDCO43847 1150 aa22.03■■□□□ 1.12
FAM3A-215ENST00000447601 GDF11O95390 407 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms