RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 CCPG1Q9ULG6 757 aa23.99■■□□□ 1.43
PTX4-203ENST00000447419 STRNO43815 780 aa23.98■■□□□ 1.43
PTX4-203ENST00000447419 HMGCRP04035 888 aa23.98■■□□□ 1.43
PTX4-203ENST00000447419 KCTD2Q14681 263 aa23.98■■□□□ 1.43
PTX4-203ENST00000447419 NFXL1Q6ZNB6 911 aa23.98■■□□□ 1.43
PTX4-203ENST00000447419 NUP133Q8WUM0 1156 aa23.98■■□□□ 1.43
PTX4-203ENST00000447419 RANBP17Q9H2T7 1088 aaKnown RBP23.98■■□□□ 1.43
PTX4-203ENST00000447419 ATP2A1O14983 1001 aa23.97■■□□□ 1.43
PTX4-203ENST00000447419 XRCC5P13010 732 aaKnown RBP23.97■■□□□ 1.43
PTX4-203ENST00000447419 RXRAP19793 462 aa23.97■■□□□ 1.43
PTX4-203ENST00000447419 CYP2C19P33261 490 aa23.97■■□□□ 1.43
PTX4-203ENST00000447419 GPATCH4Q5T3I0 446 aaKnown RBP23.97■■□□□ 1.43
PTX4-203ENST00000447419 RNF146Q9NTX7 359 aa23.97■■□□□ 1.43
PTX4-203ENST00000447419 SNX14Q9Y5W7 946 aa23.97■■□□□ 1.43
PTX4-203ENST00000447419 SH2B2O14492 632 aaPredicted RBP23.96■■□□□ 1.43
PTX4-203ENST00000447419 PRKAR2AP13861 404 aaKnown RBP23.96■■□□□ 1.43
PTX4-203ENST00000447419 HSPA4P34932 840 aa23.96■■□□□ 1.43
PTX4-203ENST00000447419 ASPRV1Q53RT3 343 aa23.96■■□□□ 1.43
PTX4-203ENST00000447419 MUM1L1Q5H9M0 696 aa23.96■■□□□ 1.43
PTX4-203ENST00000447419 TRERF1Q96PN7 1200 aa23.96■■□□□ 1.43
PTX4-203ENST00000447419 MAD2L2Q9UI95 211 aa23.96■■□□□ 1.43
PTX4-203ENST00000447419 OAZ1P54368 228 aa23.95■■□□□ 1.43
PTX4-203ENST00000447419 CACNB2Q08289 660 aaPredicted RBP23.95■■□□□ 1.43
PTX4-203ENST00000447419 USH1GQ495M9 461 aa23.95■■□□□ 1.43
PTX4-203ENST00000447419 CCDC144CPQ8IYA2 1237 aa23.95■■□□□ 1.43
PTX4-203ENST00000447419 ADGRF4Q8IZF3 695 aa23.95■■□□□ 1.43
PTX4-203ENST00000447419 ANKRD35Q8N283 1001 aa23.95■■□□□ 1.43
PTX4-203ENST00000447419 DDX11Q96FC9 970 aa23.95■■□□□ 1.43
PTX4-203ENST00000447419 JAKMIP1Q96N16 626 aaKnown RBP23.95■■□□□ 1.43
PTX4-203ENST00000447419 FDX1P10109 184 aa23.94■■□□□ 1.42
PTX4-203ENST00000447419 CATIPQ7Z7H3 387 aa23.94■■□□□ 1.42
PTX4-203ENST00000447419 PIBF1Q8WXW3 757 aa23.94■■□□□ 1.42
PTX4-203ENST00000447419 KLRF2D3W0D1 207 aa23.94■■□□□ 1.42
PTX4-203ENST00000447419 ICAM1P05362 532 aa23.94■■□□□ 1.42
PTX4-203ENST00000447419 HOXC6P09630 235 aa23.94■■□□□ 1.42
PTX4-203ENST00000447419 CCND3P30281 292 aaPredicted RBP23.94■■□□□ 1.42
PTX4-203ENST00000447419 COPB2P35606 906 aa23.94■■□□□ 1.42
PTX4-203ENST00000447419 ZNF654Q8IZM8 581 aa23.94■■□□□ 1.42
PTX4-203ENST00000447419 ABRAQ8N0Z2 381 aa23.94■■□□□ 1.42
PTX4-203ENST00000447419 DEFB118Q96PH6 123 aa23.94■■□□□ 1.42
PTX4-203ENST00000447419 USP26Q9BXU7 913 aa23.94■■□□□ 1.42
PTX4-203ENST00000447419 CCDC69A6NI79 296 aa23.93■■□□□ 1.42
PTX4-203ENST00000447419 TROAPQ12815 778 aa23.93■■□□□ 1.42
PTX4-203ENST00000447419 GRM4Q14833 912 aa23.93■■□□□ 1.42
PTX4-203ENST00000447419 CDC37Q16543 378 aaPredicted RBP23.93■■□□□ 1.42
PTX4-203ENST00000447419 SLC35G1Q2M3R5 365 aa23.93■■□□□ 1.42
PTX4-203ENST00000447419 PRAMEF19Q5SWL8 479 aa23.93■■□□□ 1.42
PTX4-203ENST00000447419 MAML3Q96JK9 1138 aa23.93■■□□□ 1.42
PTX4-203ENST00000447419 TMEM87BQ96K49 555 aa23.93■■□□□ 1.42
PTX4-203ENST00000447419 ACAD9Q9H845 621 aa23.93■■□□□ 1.42
PTX4-203ENST00000447419 TSGA10IPQ3SY00 556 aa23.92■■□□□ 1.42
PTX4-203ENST00000447419 NSMFQ6X4W1 530 aa23.92■■□□□ 1.42
PTX4-203ENST00000447419 CHST13Q8NET6 341 aa23.92■■□□□ 1.42
PTX4-203ENST00000447419 PURBQ96QR8 312 aaKnown RBP23.92■■□□□ 1.42
PTX4-203ENST00000447419 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.92■■□□□ 1.42
PTX4-203ENST00000447419 JMJD4Q9H9V9 463 aa23.92■■□□□ 1.42
PTX4-203ENST00000447419 DDX49Q9Y6V7 483 aaKnown RBP23.92■■□□□ 1.42
PTX4-203ENST00000447419 PALM3A6NDB9 673 aaPredicted RBP23.91■■□□□ 1.42
PTX4-203ENST00000447419 NFIBO00712 420 aa23.91■■□□□ 1.42
PTX4-203ENST00000447419 EXOSC10Q01780 885 aaKnown RBP23.91■■□□□ 1.42
PTX4-203ENST00000447419 CNTN2Q02246 1040 aa23.91■■□□□ 1.42
PTX4-203ENST00000447419 KRT32Q14532 448 aa23.91■■□□□ 1.42
PTX4-203ENST00000447419 ZNF792Q3KQV3 632 aa23.91■■□□□ 1.42
PTX4-203ENST00000447419 MFSD14CQ5VZR4 134 aa23.91■■□□□ 1.42
PTX4-203ENST00000447419 DHX32Q7L7V1 743 aaKnown RBP23.91■■□□□ 1.42
PTX4-203ENST00000447419 HOMER1Q86YM7 354 aa23.91■■□□□ 1.42
PTX4-203ENST00000447419 CMTR1Q8N1G2 835 aaKnown RBP23.91■■□□□ 1.42
PTX4-203ENST00000447419 KCNB2Q92953 911 aa23.91■■□□□ 1.42
PTX4-203ENST00000447419 HMX1Q9NP08 348 aaPredicted RBP23.91■■□□□ 1.42
PTX4-203ENST00000447419 A1CFQ9NQ94 594 aaKnown RBP23.91■■□□□ 1.42
PTX4-203ENST00000447419 MKI67P46013 3256 aaKnown RBP23.9■■□□□ 1.42
PTX4-203ENST00000447419 CNGA1P29973 690 aa23.9■■□□□ 1.42
PTX4-203ENST00000447419 QRICH1Q2TAL8 776 aa23.9■■□□□ 1.42
PTX4-203ENST00000447419 TRMT44Q8IYL2 757 aaKnown RBP23.9■■□□□ 1.42
PTX4-203ENST00000447419 SLC5A4Q9NY91 659 aa23.9■■□□□ 1.42
PTX4-203ENST00000447419 FBXO40Q9UH90 709 aa23.9■■□□□ 1.42
PTX4-203ENST00000447419 SEC24BO95487 1268 aa23.89■■□□□ 1.42
PTX4-203ENST00000447419 MAP3K21Q5TCX8 1036 aa23.89■■□□□ 1.42
PTX4-203ENST00000447419 MICU3Q86XE3 530 aa23.89■■□□□ 1.42
PTX4-203ENST00000447419 TRPV1Q8NER1 839 aa23.89■■□□□ 1.42
PTX4-203ENST00000447419 U2AF1L4Q8WU68 220 aaKnown RBP23.89■■□□□ 1.42
PTX4-203ENST00000447419 SHISA4Q96DD7 197 aa23.89■■□□□ 1.42
PTX4-203ENST00000447419 NAP1L2Q9ULW6 460 aaPredicted RBP23.89■■□□□ 1.42
PTX4-203ENST00000447419 RPTORQ8N122 1335 aa23.89■■□□□ 1.42
PTX4-203ENST00000447419 CASTP20810 708 aaKnown RBP23.89■■□□□ 1.41
PTX4-203ENST00000447419 FGD1P98174 961 aa23.89■■□□□ 1.41
PTX4-203ENST00000447419 ANO1Q5XXA6 986 aa23.89■■□□□ 1.41
PTX4-203ENST00000447419 BRPF3Q9ULD4 1205 aa23.89■■□□□ 1.41
PTX4-203ENST00000447419 SLC12A7Q9Y666 1083 aa23.89■■□□□ 1.41
PTX4-203ENST00000447419 DNAJC25-GNG10A0A024R161 153 aa23.88■■□□□ 1.41
PTX4-203ENST00000447419 CYTH3O43739 400 aa23.88■■□□□ 1.41
PTX4-203ENST00000447419 PLEKHA8P1O95397 391 aa23.88■■□□□ 1.41
PTX4-203ENST00000447419 GJB1P08034 283 aa23.88■■□□□ 1.41
PTX4-203ENST00000447419 BLOC1S2Q6QNY1 142 aa23.88■■□□□ 1.41
PTX4-203ENST00000447419 CCDC82Q8N4S0 544 aa23.88■■□□□ 1.41
PTX4-203ENST00000447419 PIGSQ96S52 555 aa23.88■■□□□ 1.41
PTX4-203ENST00000447419 PAK6Q9NQU5 681 aaPredicted RBP23.88■■□□□ 1.41
PTX4-203ENST00000447419 PTPDC1A2A3K4 754 aa23.87■■□□□ 1.41
PTX4-203ENST00000447419 POTEB2H3BUK9 544 aa23.87■■□□□ 1.41
PTX4-203ENST00000447419 LIFRP42702 1097 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms