RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 SYNE3Q6ZMZ3 975 aa25.62■■□□□ 1.69
APOE-204ENST00000446996 RUFY3Q7L099 469 aa25.62■■□□□ 1.69
APOE-204ENST00000446996 CPXCR1Q8N123 301 aa25.62■■□□□ 1.69
APOE-204ENST00000446996 CHST13Q8NET6 341 aa25.62■■□□□ 1.69
APOE-204ENST00000446996 RAET1EQ8TD07 263 aa25.62■■□□□ 1.69
APOE-204ENST00000446996 RAVER2Q9HCJ3 691 aaKnown RBP25.62■■□□□ 1.69
APOE-204ENST00000446996 SLC12A7Q9Y666 1083 aa25.62■■□□□ 1.69
APOE-204ENST00000446996 PTCH2Q9Y6C5 1203 aa25.62■■□□□ 1.69
APOE-204ENST00000446996 KLRF2D3W0D1 207 aa25.61■■□□□ 1.69
APOE-204ENST00000446996 ECM2O94769 699 aaPredicted RBP25.61■■□□□ 1.69
APOE-204ENST00000446996 ICAM1P05362 532 aa25.61■■□□□ 1.69
APOE-204ENST00000446996 GNAQP50148 359 aa25.61■■□□□ 1.69
APOE-204ENST00000446996 WDR78Q5VTH9 848 aa25.61■■□□□ 1.69
APOE-204ENST00000446996 STAG2Q8N3U4 1231 aa25.61■■□□□ 1.69
APOE-204ENST00000446996 CTCFLQ8NI51 663 aaPredicted RBP25.61■■□□□ 1.69
APOE-204ENST00000446996 LZTS2Q9BRK4 669 aa25.61■■□□□ 1.69
APOE-204ENST00000446996 UBA5Q9GZZ9 404 aa25.61■■□□□ 1.69
APOE-204ENST00000446996 CYP46A1Q9Y6A2 500 aa25.61■■□□□ 1.69
APOE-204ENST00000446996 HOXC6P09630 235 aa25.6■■□□□ 1.69
APOE-204ENST00000446996 RGS2P41220 211 aa25.6■■□□□ 1.69
APOE-204ENST00000446996 MAP2K5Q13163 448 aa25.6■■□□□ 1.69
APOE-204ENST00000446996 TRMT44Q8IYL2 757 aaKnown RBP25.6■■□□□ 1.69
APOE-204ENST00000446996 ADGRF4Q8IZF3 695 aa25.6■■□□□ 1.69
APOE-204ENST00000446996 SLAIN1Q8ND83 568 aa25.6■■□□□ 1.69
APOE-204ENST00000446996 FCER1AP12319 257 aa25.59■■□□□ 1.69
APOE-204ENST00000446996 FGD1P98174 961 aa25.59■■□□□ 1.69
APOE-204ENST00000446996 Q6ZUG5 572 aa25.59■■□□□ 1.69
APOE-204ENST00000446996 NBPF11Q86T75 865 aa25.59■■□□□ 1.69
APOE-204ENST00000446996 NUP133Q8WUM0 1156 aa25.59■■□□□ 1.69
APOE-204ENST00000446996 MTMR8Q96EF0 704 aa25.59■■□□□ 1.69
APOE-204ENST00000446996 TCEANC2Q96MN5 208 aa25.59■■□□□ 1.69
APOE-204ENST00000446996 MAF1Q9H063 256 aa25.59■■□□□ 1.69
APOE-204ENST00000446996 RIOX1Q9H6W3 641 aa25.59■■□□□ 1.69
APOE-204ENST00000446996 HPS5Q9UPZ3 1129 aa25.59■■□□□ 1.69
APOE-204ENST00000446996 RIPK3Q9Y572 518 aa25.59■■□□□ 1.69
APOE-204ENST00000446996 CPA1P15085 419 aa25.58■■□□□ 1.69
APOE-204ENST00000446996 PPP2R5BQ15173 497 aa25.58■■□□□ 1.69
APOE-204ENST00000446996 APOA5Q6Q788 366 aa25.58■■□□□ 1.69
APOE-204ENST00000446996 ARMC5Q96C12 935 aa25.58■■□□□ 1.69
APOE-204ENST00000446996 AGBL1Q96MI9 1066 aa25.58■■□□□ 1.69
APOE-204ENST00000446996 JMJD4Q9H9V9 463 aa25.58■■□□□ 1.69
APOE-204ENST00000446996 SLC5A4Q9NY91 659 aa25.58■■□□□ 1.69
APOE-204ENST00000446996 MYH6P13533 1939 aa25.58■■□□□ 1.69
APOE-204ENST00000446996 ADCY3O60266 1144 aa25.57■■□□□ 1.68
APOE-204ENST00000446996 GRK4P32298 578 aa25.57■■□□□ 1.68
APOE-204ENST00000446996 EVCP57679 992 aa25.57■■□□□ 1.68
APOE-204ENST00000446996 CCDC174Q6PII3 467 aa25.57■■□□□ 1.68
APOE-204ENST00000446996 FANCBQ8NB91 859 aa25.57■■□□□ 1.68
APOE-204ENST00000446996 ALDH8A1Q9H2A2 487 aaPredicted RBP25.57■■□□□ 1.68
APOE-204ENST00000446996 CCPG1Q9ULG6 757 aa25.57■■□□□ 1.68
APOE-204ENST00000446996 SMCHD1A6NHR9 2005 aa25.56■■□□□ 1.68
APOE-204ENST00000446996 TRAF1Q13077 416 aa25.56■■□□□ 1.68
APOE-204ENST00000446996 KCTD2Q14681 263 aa25.56■■□□□ 1.68
APOE-204ENST00000446996 SLC9C1Q4G0N8 1177 aa25.56■■□□□ 1.68
APOE-204ENST00000446996 MMP19Q99542 508 aa25.56■■□□□ 1.68
APOE-204ENST00000446996 APBA2Q99767 749 aa25.56■■□□□ 1.68
APOE-204ENST00000446996 SPZ1Q9BXG8 430 aa25.56■■□□□ 1.68
APOE-204ENST00000446996 ACAD9Q9H845 621 aa25.56■■□□□ 1.68
APOE-204ENST00000446996 RBM28Q9NW13 759 aaKnown RBP25.56■■□□□ 1.68
APOE-204ENST00000446996 DIS3Q9Y2L1 958 aaKnown RBP25.56■■□□□ 1.68
APOE-204ENST00000446996 ZBTB43O43298 467 aa25.55■■□□□ 1.68
APOE-204ENST00000446996 CYP2B6P20813 491 aa25.55■■□□□ 1.68
APOE-204ENST00000446996 ADORA2AP29274 412 aa25.55■■□□□ 1.68
APOE-204ENST00000446996 SNAP25P60880 206 aa25.55■■□□□ 1.68
APOE-204ENST00000446996 CDC37Q16543 378 aaPredicted RBP25.55■■□□□ 1.68
APOE-204ENST00000446996 BRF1Q92994 677 aa25.55■■□□□ 1.68
APOE-204ENST00000446996 TRERF1Q96PN7 1200 aa25.55■■□□□ 1.68
APOE-204ENST00000446996 MYL10Q9BUA6 226 aa25.55■■□□□ 1.68
APOE-204ENST00000446996 CPVLQ9H3G5 476 aa25.55■■□□□ 1.68
APOE-204ENST00000446996 BRPF3Q9ULD4 1205 aa25.55■■□□□ 1.68
APOE-204ENST00000446996 BAZ2BQ9UIF8 2168 aaKnown RBP25.54■■□□□ 1.68
APOE-204ENST00000446996 KLF18A0A0U1RQI7 1052 aa25.54■■□□□ 1.68
APOE-204ENST00000446996 DHX16O60231 1041 aaKnown RBP25.54■■□□□ 1.68
APOE-204ENST00000446996 ALAS1P13196 640 aa25.54■■□□□ 1.68
APOE-204ENST00000446996 DPP9Q86TI2 863 aa25.54■■□□□ 1.68
APOE-204ENST00000446996 RNF146Q9NTX7 359 aa25.54■■□□□ 1.68
APOE-204ENST00000446996 ZBTB5O15062 677 aa25.53■■□□□ 1.68
APOE-204ENST00000446996 QRICH1Q2TAL8 776 aa25.53■■□□□ 1.68
APOE-204ENST00000446996 VAT1LQ9HCJ6 419 aa25.53■■□□□ 1.68
APOE-204ENST00000446996 PDRG1Q9NUG6 133 aa25.53■■□□□ 1.68
APOE-204ENST00000446996 NID2Q14112 1375 aa25.53■■□□□ 1.68
APOE-204ENST00000446996 CYTH3O43739 400 aa25.52■■□□□ 1.68
APOE-204ENST00000446996 SLC4A3P48751 1232 aa25.52■■□□□ 1.68
APOE-204ENST00000446996 UBXN2AP68543 259 aa25.52■■□□□ 1.68
APOE-204ENST00000446996 MICU3Q86XE3 530 aa25.52■■□□□ 1.68
APOE-204ENST00000446996 FBXO11Q86XK2 927 aa25.52■■□□□ 1.68
APOE-204ENST00000446996 UPF3BQ9BZI7 483 aaKnown RBP25.52■■□□□ 1.68
APOE-204ENST00000446996 ABCB11O95342 1321 aa25.52■■□□□ 1.68
APOE-204ENST00000446996 PLXNA1Q9UIW2 1896 aa25.51■■□□□ 1.67
APOE-204ENST00000446996 DNAJC25-GNG10A0A024R161 153 aa25.51■■□□□ 1.67
APOE-204ENST00000446996 CCDC196A0A1B0GTZ2 297 aa25.51■■□□□ 1.67
APOE-204ENST00000446996 COBLO75128 1261 aa25.51■■□□□ 1.67
APOE-204ENST00000446996 HMGCRP04035 888 aa25.51■■□□□ 1.67
APOE-204ENST00000446996 RBM25P49756 843 aaKnown RBP25.51■■□□□ 1.67
APOE-204ENST00000446996 APOBRQ0VD83 1088 aa25.51■■□□□ 1.67
APOE-204ENST00000446996 TOB2Q14106 344 aaPredicted RBP25.51■■□□□ 1.67
APOE-204ENST00000446996 SLC35G1Q2M3R5 365 aa25.51■■□□□ 1.67
APOE-204ENST00000446996 OLFML2BQ68BL8 750 aa25.51■■□□□ 1.67
APOE-204ENST00000446996 TMTC3Q6ZXV5 915 aa25.51■■□□□ 1.67
APOE-204ENST00000446996 ANKRD35Q8N283 1001 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms