RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 CCDC178Q5BJE1 867 aa17.33■□□□□ 0.36
USE1-202ENST00000445667 SYDE2Q5VT97 1194 aa17.33■□□□□ 0.36
USE1-202ENST00000445667 CYB5R4Q7L1T6 521 aa17.33■□□□□ 0.36
USE1-202ENST00000445667 ENAHQ8N8S7 591 aaPredicted RBP17.33■□□□□ 0.36
USE1-202ENST00000445667 TRERF1Q96PN7 1200 aa17.33■□□□□ 0.36
USE1-202ENST00000445667 TINF2Q9BSI4 451 aa17.33■□□□□ 0.36
USE1-202ENST00000445667 RNF146Q9NTX7 359 aa17.33■□□□□ 0.36
USE1-202ENST00000445667 FBXO40Q9UH90 709 aa17.33■□□□□ 0.36
USE1-202ENST00000445667 U3KPZ7 1027 aaPredicted RBP17.33■□□□□ 0.36
USE1-202ENST00000445667 TNKSO95271 1327 aa17.32■□□□□ 0.36
USE1-202ENST00000445667 GOLGA8HP0CJ92 632 aa17.32■□□□□ 0.36
USE1-202ENST00000445667 SNHG28P0DPA3 235 aa17.32■□□□□ 0.36
USE1-202ENST00000445667 NT5C2P49902 561 aa17.32■□□□□ 0.36
USE1-202ENST00000445667 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.32■□□□□ 0.36
USE1-202ENST00000445667 PNMA1Q8ND90 353 aa17.32■□□□□ 0.36
USE1-202ENST00000445667 ANKS1AQ92625 1134 aa17.32■□□□□ 0.36
USE1-202ENST00000445667 MAP4K1Q92918 833 aa17.32■□□□□ 0.36
USE1-202ENST00000445667 RANBP17Q9H2T7 1088 aaKnown RBP17.32■□□□□ 0.36
USE1-202ENST00000445667 C11orf49Q9H6J7 331 aa17.32■□□□□ 0.36
USE1-202ENST00000445667 ACAD9Q9H845 621 aa17.32■□□□□ 0.36
USE1-202ENST00000445667 KAT14Q9H8E8 782 aa17.32■□□□□ 0.36
USE1-202ENST00000445667 H0YGN5 161 aa17.31■□□□□ 0.36
USE1-202ENST00000445667 SEPT4O43236 478 aa17.31■□□□□ 0.36
USE1-202ENST00000445667 MSCO60682 206 aa17.31■□□□□ 0.36
USE1-202ENST00000445667 TRDNQ13061 729 aa17.31■□□□□ 0.36
USE1-202ENST00000445667 TKFCQ3LXA3 575 aa17.31■□□□□ 0.36
USE1-202ENST00000445667 MUM1L1Q5H9M0 696 aa17.31■□□□□ 0.36
USE1-202ENST00000445667 UBAC1Q9BSL1 405 aa17.31■□□□□ 0.36
USE1-202ENST00000445667 UBA5Q9GZZ9 404 aa17.31■□□□□ 0.36
USE1-202ENST00000445667 CPVLQ9H3G5 476 aa17.31■□□□□ 0.36
USE1-202ENST00000445667 CCPG1Q9ULG6 757 aa17.31■□□□□ 0.36
USE1-202ENST00000445667 RBM8AQ9Y5S9 174 aaKnown RBP17.31■□□□□ 0.36
USE1-202ENST00000445667 ICAM1P05362 532 aa17.3■□□□□ 0.36
USE1-202ENST00000445667 CNTN2Q02246 1040 aa17.3■□□□□ 0.36
USE1-202ENST00000445667 BMP2KLQ5H9B9 411 aa17.3■□□□□ 0.36
USE1-202ENST00000445667 KIAA1211Q6ZU35 1233 aa17.3■□□□□ 0.36
USE1-202ENST00000445667 FGD4Q96M96 766 aa17.3■□□□□ 0.36
USE1-202ENST00000445667 ESYT1Q9BSJ8 1104 aa17.3■□□□□ 0.36
USE1-202ENST00000445667 A1CFQ9NQ94 594 aaKnown RBP17.3■□□□□ 0.36
USE1-202ENST00000445667 PFASO15067 1338 aa17.29■□□□□ 0.36
USE1-202ENST00000445667 E7EWF7 191 aa17.29■□□□□ 0.36
USE1-202ENST00000445667 EVI5O60447 810 aa17.29■□□□□ 0.36
USE1-202ENST00000445667 SNAI1O95863 264 aaPredicted RBP17.29■□□□□ 0.36
USE1-202ENST00000445667 ZNF865P0CJ78 1059 aaPredicted RBP17.29■□□□□ 0.36
USE1-202ENST00000445667 SEC23AQ15436 765 aa17.29■□□□□ 0.36
USE1-202ENST00000445667 IFIT1BQ5T764 474 aaKnown RBP17.29■□□□□ 0.36
USE1-202ENST00000445667 MAMDC4Q6UXC1 1216 aa17.29■□□□□ 0.36
USE1-202ENST00000445667 STOX1Q6ZVD7 989 aa17.29■□□□□ 0.36
USE1-202ENST00000445667 LSG1Q9H089 658 aaKnown RBP17.29■□□□□ 0.36
USE1-202ENST00000445667 NRBP1Q9UHY1 535 aa17.29■□□□□ 0.36
USE1-202ENST00000445667 PLXNA1Q9UIW2 1896 aa17.29■□□□□ 0.36
USE1-202ENST00000445667 POTEB2H3BUK9 544 aa17.28■□□□□ 0.36
USE1-202ENST00000445667 MYCNP04198 464 aaPredicted RBP17.28■□□□□ 0.36
USE1-202ENST00000445667 NEFLP07196 543 aa17.28■□□□□ 0.36
USE1-202ENST00000445667 COL6A1P12109 1028 aa17.28■□□□□ 0.36
USE1-202ENST00000445667 GPATCH4Q5T3I0 446 aaKnown RBP17.28■□□□□ 0.36
USE1-202ENST00000445667 GJC2Q5T442 439 aaPredicted RBP17.28■□□□□ 0.36
USE1-202ENST00000445667 NSMFQ6X4W1 530 aa17.28■□□□□ 0.36
USE1-202ENST00000445667 CHST3Q7LGC8 479 aa17.28■□□□□ 0.36
USE1-202ENST00000445667 MSL3Q8N5Y2 521 aaKnown RBP17.28■□□□□ 0.36
USE1-202ENST00000445667 CNPY2Q9Y2B0 182 aa17.28■□□□□ 0.36
USE1-202ENST00000445667 NR2E3Q9Y5X4 410 aa17.28■□□□□ 0.36
USE1-202ENST00000445667 SYNGAP1Q96PV0 1343 aa17.27■□□□□ 0.36
USE1-202ENST00000445667 SOWAHBA6NEL2 793 aa17.27■□□□□ 0.36
USE1-202ENST00000445667 ZNF467Q7Z7K2 595 aaPredicted RBP17.27■□□□□ 0.36
USE1-202ENST00000445667 RALYLQ86SE5 291 aaKnown RBP17.27■□□□□ 0.36
USE1-202ENST00000445667 FAM133AQ8N9E0 248 aa17.27■□□□□ 0.36
USE1-202ENST00000445667 NCOA7Q8NI08 942 aa17.27■□□□□ 0.36
USE1-202ENST00000445667 SENP6Q9GZR1 1112 aaPredicted RBP17.27■□□□□ 0.36
USE1-202ENST00000445667 SENP2Q9HC62 589 aa17.27■□□□□ 0.36
USE1-202ENST00000445667 NFIBO00712 420 aa17.26■□□□□ 0.35
USE1-202ENST00000445667 IFIT3O14879 490 aaKnown RBP17.26■□□□□ 0.35
USE1-202ENST00000445667 PARP1P09874 1014 aaKnown RBP17.26■□□□□ 0.35
USE1-202ENST00000445667 ARMCX2Q7L311 632 aa17.26■□□□□ 0.35
USE1-202ENST00000445667 C7orf61Q8IZ16 206 aa17.26■□□□□ 0.35
USE1-202ENST00000445667 ARRDC4Q8NCT1 418 aa17.26■□□□□ 0.35
USE1-202ENST00000445667 LENG1Q96BZ8 264 aaPredicted RBP17.26■□□□□ 0.35
USE1-202ENST00000445667 PURBQ96QR8 312 aaKnown RBP17.26■□□□□ 0.35
USE1-202ENST00000445667 ANO2Q9NQ90 1003 aa17.26■□□□□ 0.35
USE1-202ENST00000445667 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.26■□□□□ 0.35
USE1-202ENST00000445667 CYP39A1Q9NYL5 469 aa17.26■□□□□ 0.35
USE1-202ENST00000445667 ZHX1Q9UKY1 873 aaPredicted RBP17.26■□□□□ 0.35
USE1-202ENST00000445667 DDX49Q9Y6V7 483 aaKnown RBP17.26■□□□□ 0.35
USE1-202ENST00000445667 FRMPD3Q5JV73 1810 aa17.26■□□□□ 0.35
USE1-202ENST00000445667 DNM1LO00429 736 aa17.25■□□□□ 0.35
USE1-202ENST00000445667 RARBP10826 455 aa17.25■□□□□ 0.35
USE1-202ENST00000445667 ACVR2BQ13705 512 aa17.25■□□□□ 0.35
USE1-202ENST00000445667 BAATQ14032 418 aaPredicted RBP17.25■□□□□ 0.35
USE1-202ENST00000445667 LRRC41Q15345 812 aa17.25■□□□□ 0.35
USE1-202ENST00000445667 LRRC26Q2I0M4 334 aa17.25■□□□□ 0.35
USE1-202ENST00000445667 ASPRV1Q53RT3 343 aa17.25■□□□□ 0.35
USE1-202ENST00000445667 CCDC144CPQ8IYA2 1237 aa17.25■□□□□ 0.35
USE1-202ENST00000445667 ADGRF4Q8IZF3 695 aa17.25■□□□□ 0.35
USE1-202ENST00000445667 STAG2Q8N3U4 1231 aa17.25■□□□□ 0.35
USE1-202ENST00000445667 VAT1LQ9HCJ6 419 aa17.25■□□□□ 0.35
USE1-202ENST00000445667 SMCHD1A6NHR9 2005 aa17.25■□□□□ 0.35
USE1-202ENST00000445667 PTPDC1A2A3K4 754 aa17.24■□□□□ 0.35
USE1-202ENST00000445667 SLC27A2O14975 620 aa17.24■□□□□ 0.35
USE1-202ENST00000445667 PGK1P00558 417 aa17.24■□□□□ 0.35
USE1-202ENST00000445667 AKR1A1P14550 325 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms