RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 SYDE2Q5VT97 1194 aa28.01■■■□□ 2.07
C9orf3-207ENST00000445181 MFSD14CQ5VZR4 134 aa28.01■■■□□ 2.07
C9orf3-207ENST00000445181 PAWRQ96IZ0 340 aaKnown RBP28.01■■■□□ 2.07
C9orf3-207ENST00000445181 FLRT1Q9NZU1 646 aa28.01■■■□□ 2.07
C9orf3-207ENST00000445181 ATP2A1O14983 1001 aa28■■■□□ 2.07
C9orf3-207ENST00000445181 OAZ1P54368 228 aa28■■■□□ 2.07
C9orf3-207ENST00000445181 SNAP25P60880 206 aa28■■■□□ 2.07
C9orf3-207ENST00000445181 CCDC174Q6PII3 467 aa28■■■□□ 2.07
C9orf3-207ENST00000445181 DPP9Q86TI2 863 aa28■■■□□ 2.07
C9orf3-207ENST00000445181 ANKLE1Q8NAG6 615 aa28■■■□□ 2.07
C9orf3-207ENST00000445181 NPLOC4Q8TAT6 608 aa28■■■□□ 2.07
C9orf3-207ENST00000445181 PARP1P09874 1014 aaKnown RBP27.99■■■□□ 2.07
C9orf3-207ENST00000445181 FCER1AP12319 257 aa27.99■■■□□ 2.07
C9orf3-207ENST00000445181 ADORA2AP29274 412 aa27.99■■■□□ 2.07
C9orf3-207ENST00000445181 CCND3P30281 292 aaPredicted RBP27.99■■■□□ 2.07
C9orf3-207ENST00000445181 KRT32Q14532 448 aa27.99■■■□□ 2.07
C9orf3-207ENST00000445181 BTNL9Q6UXG8 535 aa27.99■■■□□ 2.07
C9orf3-207ENST00000445181 NECAB2Q7Z6G3 386 aa27.99■■■□□ 2.07
C9orf3-207ENST00000445181 OGDHLQ9ULD0 1010 aa27.99■■■□□ 2.07
C9orf3-207ENST00000445181 ASPRV1Q53RT3 343 aa27.98■■■□□ 2.07
C9orf3-207ENST00000445181 RASEFQ8IZ41 740 aa27.98■■■□□ 2.07
C9orf3-207ENST00000445181 DIS3LQ8TF46 1054 aaKnown RBP27.98■■■□□ 2.07
C9orf3-207ENST00000445181 NEK1Q96PY6 1258 aa27.98■■■□□ 2.07
C9orf3-207ENST00000445181 MMP19Q99542 508 aa27.98■■■□□ 2.07
C9orf3-207ENST00000445181 SLC34A2O95436 690 aa27.97■■■□□ 2.07
C9orf3-207ENST00000445181 KCTD2Q14681 263 aa27.97■■■□□ 2.07
C9orf3-207ENST00000445181 IGDCC4Q8TDY8 1250 aa27.97■■■□□ 2.07
C9orf3-207ENST00000445181 SENP2Q9HC62 589 aa27.97■■■□□ 2.07
C9orf3-207ENST00000445181 HOMER2Q9NSB8 354 aa27.97■■■□□ 2.07
C9orf3-207ENST00000445181 RIPK3Q9Y572 518 aa27.97■■■□□ 2.07
C9orf3-207ENST00000445181 HSPA4P34932 840 aa27.96■■■□□ 2.07
C9orf3-207ENST00000445181 TSGA10IPQ3SY00 556 aa27.96■■■□□ 2.07
C9orf3-207ENST00000445181 CATIPQ7Z7H3 387 aa27.96■■■□□ 2.07
C9orf3-207ENST00000445181 ABRAQ8N0Z2 381 aa27.96■■■□□ 2.07
C9orf3-207ENST00000445181 TMEM87BQ96K49 555 aa27.96■■■□□ 2.07
C9orf3-207ENST00000445181 AGBL1Q96MI9 1066 aa27.96■■■□□ 2.07
C9orf3-207ENST00000445181 MTA3Q9BTC8 594 aa27.96■■■□□ 2.07
C9orf3-207ENST00000445181 SLC5A4Q9NY91 659 aa27.96■■■□□ 2.07
C9orf3-207ENST00000445181 NR2E3Q9Y5X4 410 aa27.96■■■□□ 2.07
C9orf3-207ENST00000445181 CYP2C19P33261 490 aa27.95■■■□□ 2.06
C9orf3-207ENST00000445181 NFXL1Q6ZNB6 911 aa27.95■■■□□ 2.06
C9orf3-207ENST00000445181 UBA5Q9GZZ9 404 aa27.95■■■□□ 2.06
C9orf3-207ENST00000445181 RANBP17Q9H2T7 1088 aaKnown RBP27.95■■■□□ 2.06
C9orf3-207ENST00000445181 DHX16O60231 1041 aaKnown RBP27.94■■■□□ 2.06
C9orf3-207ENST00000445181 COBLO75128 1261 aa27.94■■■□□ 2.06
C9orf3-207ENST00000445181 MNX1P50219 401 aaPredicted RBP27.94■■■□□ 2.06
C9orf3-207ENST00000445181 ADCK5Q3MIX3 580 aa27.94■■■□□ 2.06
C9orf3-207ENST00000445181 LHX8Q68G74 356 aa27.94■■■□□ 2.06
C9orf3-207ENST00000445181 CPVLQ9H3G5 476 aa27.94■■■□□ 2.06
C9orf3-207ENST00000445181 LY9Q9HBG7 655 aa27.94■■■□□ 2.06
C9orf3-207ENST00000445181 FBXO40Q9UH90 709 aa27.94■■■□□ 2.06
C9orf3-207ENST00000445181 CCPG1Q9ULG6 757 aa27.94■■■□□ 2.06
C9orf3-207ENST00000445181 ZNF536O15090 1300 aa27.93■■■□□ 2.06
C9orf3-207ENST00000445181 CCDC69A6NI79 296 aa27.93■■■□□ 2.06
C9orf3-207ENST00000445181 SH2B2O14492 632 aaPredicted RBP27.93■■■□□ 2.06
C9orf3-207ENST00000445181 EPB41L2O43491 1005 aaKnown RBP27.93■■■□□ 2.06
C9orf3-207ENST00000445181 ALAS1P13196 640 aa27.93■■■□□ 2.06
C9orf3-207ENST00000445181 COL9A3Q14050 684 aaPredicted RBP27.93■■■□□ 2.06
C9orf3-207ENST00000445181 HABP4Q5JVS0 413 aaKnown RBP27.93■■■□□ 2.06
C9orf3-207ENST00000445181 OLFML2BQ68BL8 750 aa27.93■■■□□ 2.06
C9orf3-207ENST00000445181 TMTC2Q8N394 836 aa27.93■■■□□ 2.06
C9orf3-207ENST00000445181 CHST13Q8NET6 341 aa27.93■■■□□ 2.06
C9orf3-207ENST00000445181 LRRC2Q9BYS8 371 aa27.93■■■□□ 2.06
C9orf3-207ENST00000445181 GPHNQ9NQX3 736 aaPredicted RBP27.93■■■□□ 2.06
C9orf3-207ENST00000445181 EVI5O60447 810 aa27.92■■■□□ 2.06
C9orf3-207ENST00000445181 IGHA2P01877 340 aa27.92■■■□□ 2.06
C9orf3-207ENST00000445181 ICAM1P05362 532 aa27.92■■■□□ 2.06
C9orf3-207ENST00000445181 HMGB1P09429 215 aaKnown RBP27.92■■■□□ 2.06
C9orf3-207ENST00000445181 TKFCQ3LXA3 575 aa27.92■■■□□ 2.06
C9orf3-207ENST00000445181 ANKRD35Q8N283 1001 aa27.92■■■□□ 2.06
C9orf3-207ENST00000445181 NUP133Q8WUM0 1156 aa27.92■■■□□ 2.06
C9orf3-207ENST00000445181 DDX11Q96FC9 970 aa27.92■■■□□ 2.06
C9orf3-207ENST00000445181 RNF146Q9NTX7 359 aa27.92■■■□□ 2.06
C9orf3-207ENST00000445181 COLQQ9Y215 455 aaPredicted RBP27.92■■■□□ 2.06
C9orf3-207ENST00000445181 SNX14Q9Y5W7 946 aa27.92■■■□□ 2.06
C9orf3-207ENST00000445181 ZNF236Q9UL36 1845 aa27.92■■■□□ 2.06
C9orf3-207ENST00000445181 PGK2P07205 417 aa27.91■■■□□ 2.06
C9orf3-207ENST00000445181 CNGA1P29973 690 aa27.91■■■□□ 2.06
C9orf3-207ENST00000445181 DHX32Q7L7V1 743 aaKnown RBP27.91■■■□□ 2.06
C9orf3-207ENST00000445181 STAG2Q8N3U4 1231 aa27.91■■■□□ 2.06
C9orf3-207ENST00000445181 KCNB2Q92953 911 aa27.91■■■□□ 2.06
C9orf3-207ENST00000445181 JAKMIP1Q96N16 626 aaKnown RBP27.91■■■□□ 2.06
C9orf3-207ENST00000445181 TRERF1Q96PN7 1200 aa27.91■■■□□ 2.06
C9orf3-207ENST00000445181 C11orf49Q9H6J7 331 aa27.91■■■□□ 2.06
C9orf3-207ENST00000445181 ACAD9Q9H845 621 aa27.91■■■□□ 2.06
C9orf3-207ENST00000445181 MAD2L2Q9UI95 211 aa27.91■■■□□ 2.06
C9orf3-207ENST00000445181 KLRF2D3W0D1 207 aa27.9■■■□□ 2.06
C9orf3-207ENST00000445181 GRM4Q14833 912 aa27.9■■■□□ 2.06
C9orf3-207ENST00000445181 ADGRF4Q8IZF3 695 aa27.9■■■□□ 2.06
C9orf3-207ENST00000445181 ZNF654Q8IZM8 581 aa27.9■■■□□ 2.06
C9orf3-207ENST00000445181 USP26Q9BXU7 913 aa27.9■■■□□ 2.06
C9orf3-207ENST00000445181 VAT1LQ9HCJ6 419 aa27.9■■■□□ 2.06
C9orf3-207ENST00000445181 PNMA2Q9UL42 364 aa27.9■■■□□ 2.06
C9orf3-207ENST00000445181 LIFRP42702 1097 aa27.89■■■□□ 2.06
C9orf3-207ENST00000445181 TROAPQ12815 778 aa27.89■■■□□ 2.06
C9orf3-207ENST00000445181 TRPV1Q8NER1 839 aa27.89■■■□□ 2.06
C9orf3-207ENST00000445181 TCEANC2Q96MN5 208 aa27.89■■■□□ 2.06
C9orf3-207ENST00000445181 DDX20Q9UHI6 824 aaKnown RBP27.89■■■□□ 2.06
C9orf3-207ENST00000445181 WDR19Q8NEZ3 1342 aa27.89■■■□□ 2.05
C9orf3-207ENST00000445181 DDAH1O94760 285 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms