RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 MAPKAPK5Q8IW41 473 aa12.59□□□□□ -0.39
HDAC8-215ENST00000444609 BANK1Q8NDB2 785 aa12.59□□□□□ -0.39
HDAC8-215ENST00000444609 TGFBRAP1Q8WUH2 860 aa12.59□□□□□ -0.39
HDAC8-215ENST00000444609 ATG4CQ96DT6 458 aa12.59□□□□□ -0.39
HDAC8-215ENST00000444609 ZBED2Q9BTP6 218 aa12.59□□□□□ -0.39
HDAC8-215ENST00000444609 FTOQ9C0B1 505 aaKnown RBP eCLIP12.59□□□□□ -0.39
HDAC8-215ENST00000444609 KMT2EQ8IZD2 1858 aa12.59□□□□□ -0.39
HDAC8-215ENST00000444609 TNKSO95271 1327 aa12.59□□□□□ -0.39
HDAC8-215ENST00000444609 STXBP3O00186 592 aa12.58□□□□□ -0.4
HDAC8-215ENST00000444609 MBTPS2O43462 519 aa12.58□□□□□ -0.4
HDAC8-215ENST00000444609 SUPT20HL2P0C7V6 817 aa12.58□□□□□ -0.4
HDAC8-215ENST00000444609 CYP2C9P11712 490 aa12.58□□□□□ -0.4
HDAC8-215ENST00000444609 ADORA1P30542 326 aa12.58□□□□□ -0.4
HDAC8-215ENST00000444609 RFX5P48382 616 aaPredicted RBP12.58□□□□□ -0.4
HDAC8-215ENST00000444609 WDR43Q15061 677 aaKnown RBP eCLIP12.58□□□□□ -0.4
HDAC8-215ENST00000444609 TIGD5Q53EQ6 642 aa12.58□□□□□ -0.4
HDAC8-215ENST00000444609 TCEAL5Q5H9L2 206 aa12.58□□□□□ -0.4
HDAC8-215ENST00000444609 ATF7IPQ6VMQ6 1270 aa12.58□□□□□ -0.4
HDAC8-215ENST00000444609 RIOX2Q8IUF8 465 aa12.58□□□□□ -0.4
HDAC8-215ENST00000444609 RAD9AQ99638 391 aa12.58□□□□□ -0.4
HDAC8-215ENST00000444609 ALDH8A1Q9H2A2 487 aaPredicted RBP12.58□□□□□ -0.4
HDAC8-215ENST00000444609 CLDND1Q9NY35 253 aa12.58□□□□□ -0.4
HDAC8-215ENST00000444609 MYH13Q9UKX3 1938 aa12.58□□□□□ -0.4
HDAC8-215ENST00000444609 FLT1P17948 1338 aa12.58□□□□□ -0.4
HDAC8-215ENST00000444609 SIPA1L1O43166 1804 aa12.58□□□□□ -0.4
HDAC8-215ENST00000444609 IQCF3P0C7M6 154 aa12.57□□□□□ -0.4
HDAC8-215ENST00000444609 KCNJ6P48051 423 aa12.57□□□□□ -0.4
HDAC8-215ENST00000444609 ACAP1Q15027 740 aa12.57□□□□□ -0.4
HDAC8-215ENST00000444609 MCTP2Q6DN12 878 aa12.57□□□□□ -0.4
HDAC8-215ENST00000444609 ABHD16BQ9H3Z7 469 aa12.57□□□□□ -0.4
HDAC8-215ENST00000444609 CEP126Q9P2H0 1117 aa12.57□□□□□ -0.4
HDAC8-215ENST00000444609 A0A1W2PRG0 241 aa12.56□□□□□ -0.4
HDAC8-215ENST00000444609 NCK2O43639 380 aa12.56□□□□□ -0.4
HDAC8-215ENST00000444609 FLOT1O75955 427 aa12.56□□□□□ -0.4
HDAC8-215ENST00000444609 GJB5O95377 273 aa12.56□□□□□ -0.4
HDAC8-215ENST00000444609 HLA-DOAP06340 250 aa12.56□□□□□ -0.4
HDAC8-215ENST00000444609 WDR5P61964 334 aaKnown RBP12.56□□□□□ -0.4
HDAC8-215ENST00000444609 PSMC6P62333 389 aa12.56□□□□□ -0.4
HDAC8-215ENST00000444609 ABCB5Q2M3G0 1257 aa12.56□□□□□ -0.4
HDAC8-215ENST00000444609 CTC1Q2NKJ3 1217 aa12.56□□□□□ -0.4
HDAC8-215ENST00000444609 SLC4A10Q6U841 1118 aa12.56□□□□□ -0.4
HDAC8-215ENST00000444609 ZNF467Q7Z7K2 595 aaPredicted RBP12.56□□□□□ -0.4
HDAC8-215ENST00000444609 FBXO22Q8NEZ5 403 aa12.56□□□□□ -0.4
HDAC8-215ENST00000444609 TRMT13Q9NUP7 481 aaKnown RBP12.56□□□□□ -0.4
HDAC8-215ENST00000444609 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.56□□□□□ -0.4
HDAC8-215ENST00000444609 SAP30BPQ9UHR5 308 aaKnown RBP12.56□□□□□ -0.4
HDAC8-215ENST00000444609 BAG3O95817 575 aa12.55□□□□□ -0.4
HDAC8-215ENST00000444609 GUCY1A2P33402 732 aa12.55□□□□□ -0.4
HDAC8-215ENST00000444609 PPP4CP60510 307 aa12.55□□□□□ -0.4
HDAC8-215ENST00000444609 DLX2Q07687 328 aaPredicted RBP12.55□□□□□ -0.4
HDAC8-215ENST00000444609 SMAD4Q13485 552 aaKnown RBP12.55□□□□□ -0.4
HDAC8-215ENST00000444609 CLUL1Q15846 466 aa12.55□□□□□ -0.4
HDAC8-215ENST00000444609 CERKLQ49MI3 558 aaPredicted RBP12.55□□□□□ -0.4
HDAC8-215ENST00000444609 KIAA1755Q5JYT7 1200 aa12.55□□□□□ -0.4
HDAC8-215ENST00000444609 TBC1D9Q6ZT07 1266 aa12.55□□□□□ -0.4
HDAC8-215ENST00000444609 NOL10Q9BSC4 688 aaKnown RBP12.55□□□□□ -0.4
HDAC8-215ENST00000444609 C17orf80Q9BSJ5 609 aa12.55□□□□□ -0.4
HDAC8-215ENST00000444609 NSUN3Q9H649 340 aaKnown RBP12.55□□□□□ -0.4
HDAC8-215ENST00000444609 CABP5Q9NP86 173 aa12.55□□□□□ -0.4
HDAC8-215ENST00000444609 AATFQ9NY61 560 aaKnown RBP eCLIP12.55□□□□□ -0.4
HDAC8-215ENST00000444609 DLL3Q9NYJ7 618 aa12.55□□□□□ -0.4
HDAC8-215ENST00000444609 RAI14Q9P0K7 980 aa12.55□□□□□ -0.4
HDAC8-215ENST00000444609 RALYQ9UKM9 306 aaKnown RBP12.55□□□□□ -0.4
HDAC8-215ENST00000444609 ADAMTS5Q9UNA0 930 aa12.55□□□□□ -0.4
HDAC8-215ENST00000444609 ASTN1O14525 1302 aa12.55□□□□□ -0.4
HDAC8-215ENST00000444609 DNAJC25-GNG10A0A024R161 153 aa12.54□□□□□ -0.4
HDAC8-215ENST00000444609 LOC730098B7Z3J9 87 aa12.54□□□□□ -0.4
HDAC8-215ENST00000444609 VAMP4O75379 141 aa12.54□□□□□ -0.4
HDAC8-215ENST00000444609 CIAO1O76071 339 aa12.54□□□□□ -0.4
HDAC8-215ENST00000444609 PLCG2P16885 1265 aa12.54□□□□□ -0.4
HDAC8-215ENST00000444609 STAT3P40763 770 aa12.54□□□□□ -0.4
HDAC8-215ENST00000444609 DEFB103AP81534 67 aa12.54□□□□□ -0.4
HDAC8-215ENST00000444609 CBX2Q14781 532 aaPredicted RBP12.54□□□□□ -0.4
HDAC8-215ENST00000444609 FSCN1Q16658 493 aaKnown RBP12.54□□□□□ -0.4
HDAC8-215ENST00000444609 RPAINQ86UA6 219 aa12.54□□□□□ -0.4
HDAC8-215ENST00000444609 MAGEB6Q8N7X4 407 aa12.54□□□□□ -0.4
HDAC8-215ENST00000444609 RETREG2Q8NC44 543 aa12.54□□□□□ -0.4
HDAC8-215ENST00000444609 PCGF6Q9BYE7 350 aa12.54□□□□□ -0.4
HDAC8-215ENST00000444609 VPS13AQ96RL7 3174 aa12.53□□□□□ -0.4
HDAC8-215ENST00000444609 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
HDAC8-215ENST00000444609 ZEB2O60315 1214 aa12.53□□□□□ -0.4
HDAC8-215ENST00000444609 COPB2P35606 906 aa12.53□□□□□ -0.4
HDAC8-215ENST00000444609 KATNBL1Q9H079 304 aa12.53□□□□□ -0.4
HDAC8-215ENST00000444609 HMG20BQ9P0W2 317 aa12.53□□□□□ -0.4
HDAC8-215ENST00000444609 FBXO3Q9UK99 471 aa12.53□□□□□ -0.4
HDAC8-215ENST00000444609 GNEQ9Y223 722 aaKnown RBP12.53□□□□□ -0.4
HDAC8-215ENST00000444609 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.52□□□□□ -0.41
HDAC8-215ENST00000444609 PDGFBP01127 241 aaPredicted RBP12.52□□□□□ -0.41
HDAC8-215ENST00000444609 TIMM10P62072 90 aa12.52□□□□□ -0.41
HDAC8-215ENST00000444609 TNFAIP2Q03169 654 aa12.52□□□□□ -0.41
HDAC8-215ENST00000444609 SEPT2Q15019 361 aa12.52□□□□□ -0.41
HDAC8-215ENST00000444609 RALBP1Q15311 655 aa12.52□□□□□ -0.41
HDAC8-215ENST00000444609 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.52□□□□□ -0.41
HDAC8-215ENST00000444609 DDX11Q96FC9 970 aa12.52□□□□□ -0.41
HDAC8-215ENST00000444609 RIPOR3Q96MK2 946 aa12.52□□□□□ -0.41
HDAC8-215ENST00000444609 CRBNQ96SW2 442 aa12.52□□□□□ -0.41
HDAC8-215ENST00000444609 EHD4Q9H223 541 aa12.52□□□□□ -0.41
HDAC8-215ENST00000444609 SERPINB13Q9UIV8 391 aa12.52□□□□□ -0.41
HDAC8-215ENST00000444609 DMXL1Q9Y485 3027 aa12.52□□□□□ -0.41
HDAC8-215ENST00000444609 H3BNC9 293 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms