RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 SLC1A4P43007 532 aa16.51■□□□□ 0.23
TREX1-202ENST00000444177 OAZ1P54368 228 aa16.51■□□□□ 0.23
TREX1-202ENST00000444177 IMMTQ16891 758 aaKnown RBP16.51■□□□□ 0.23
TREX1-202ENST00000444177 SLC39A5Q6ZMH5 540 aa16.51■□□□□ 0.23
TREX1-202ENST00000444177 MSL3Q8N5Y2 521 aaKnown RBP16.51■□□□□ 0.23
TREX1-202ENST00000444177 CHURC1Q8WUH1 139 aa16.51■□□□□ 0.23
TREX1-202ENST00000444177 LRCH3Q96II8 777 aa16.51■□□□□ 0.23
TREX1-202ENST00000444177 CCDC136Q96JN2 1154 aa16.51■□□□□ 0.23
TREX1-202ENST00000444177 XPNPEP3Q9NQH7 507 aa16.51■□□□□ 0.23
TREX1-202ENST00000444177 CTNNA3Q9UI47 895 aa16.51■□□□□ 0.23
TREX1-202ENST00000444177 MTMR7Q9Y216 660 aa16.51■□□□□ 0.23
TREX1-202ENST00000444177 CNPY2Q9Y2B0 182 aa16.51■□□□□ 0.23
TREX1-202ENST00000444177 SNAI1O95863 264 aaPredicted RBP16.5■□□□□ 0.23
TREX1-202ENST00000444177 RTP1P59025 263 aa16.5■□□□□ 0.23
TREX1-202ENST00000444177 IKQ13123 557 aaPredicted RBP16.5■□□□□ 0.23
TREX1-202ENST00000444177 RCSD1Q6JBY9 416 aa16.5■□□□□ 0.23
TREX1-202ENST00000444177 MAMDC4Q6UXC1 1216 aa16.5■□□□□ 0.23
TREX1-202ENST00000444177 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.5■□□□□ 0.23
TREX1-202ENST00000444177 FAM160B2Q86V87 743 aa16.5■□□□□ 0.23
TREX1-202ENST00000444177 ANKRD35Q8N283 1001 aa16.5■□□□□ 0.23
TREX1-202ENST00000444177 CHST13Q8NET6 341 aa16.5■□□□□ 0.23
TREX1-202ENST00000444177 FERMT2Q96AC1 680 aa16.5■□□□□ 0.23
TREX1-202ENST00000444177 PPP4R2Q9NY27 417 aa16.5■□□□□ 0.23
TREX1-202ENST00000444177 FBXO40Q9UH90 709 aa16.5■□□□□ 0.23
TREX1-202ENST00000444177 PLA2G6O60733 806 aa16.49■□□□□ 0.23
TREX1-202ENST00000444177 PGK1P00558 417 aa16.49■□□□□ 0.23
TREX1-202ENST00000444177 NOVP48745 357 aa16.49■□□□□ 0.23
TREX1-202ENST00000444177 STAT2P52630 851 aa16.49■□□□□ 0.23
TREX1-202ENST00000444177 MDM2Q00987 491 aaPredicted RBP16.49■□□□□ 0.23
TREX1-202ENST00000444177 RASGRP2Q7LDG7 609 aa16.49■□□□□ 0.23
TREX1-202ENST00000444177 TDHQ8IZJ6 230 aa16.49■□□□□ 0.23
TREX1-202ENST00000444177 ESR2Q92731 530 aa16.49■□□□□ 0.23
TREX1-202ENST00000444177 ATP11BQ9Y2G3 1177 aa16.49■□□□□ 0.23
TREX1-202ENST00000444177 SYNGAP1Q96PV0 1343 aa16.48■□□□□ 0.23
TREX1-202ENST00000444177 AKR1A1P14550 325 aa16.48■□□□□ 0.23
TREX1-202ENST00000444177 CCDC96Q2M329 555 aa16.48■□□□□ 0.23
TREX1-202ENST00000444177 LRIT3Q3SXY7 679 aa16.48■□□□□ 0.23
TREX1-202ENST00000444177 KCTD1Q719H9 257 aa16.48■□□□□ 0.23
TREX1-202ENST00000444177 ZNF467Q7Z7K2 595 aaPredicted RBP16.48■□□□□ 0.23
TREX1-202ENST00000444177 RNF180Q86T96 592 aa16.48■□□□□ 0.23
TREX1-202ENST00000444177 AGBL1Q96MI9 1066 aa16.48■□□□□ 0.23
TREX1-202ENST00000444177 TCP11L1Q9NUJ3 509 aa16.48■□□□□ 0.23
TREX1-202ENST00000444177 FAM184BQ9ULE4 1060 aa16.48■□□□□ 0.23
TREX1-202ENST00000444177 PHF24Q9UPV7 400 aa16.48■□□□□ 0.23
TREX1-202ENST00000444177 PLXNA1Q9UIW2 1896 aa16.48■□□□□ 0.23
TREX1-202ENST00000444177 ZNF536O15090 1300 aa16.47■□□□□ 0.23
TREX1-202ENST00000444177 B4E1Z4 1266 aa16.47■□□□□ 0.23
TREX1-202ENST00000444177 SGSM2O43147 1006 aa16.47■□□□□ 0.23
TREX1-202ENST00000444177 TOP1P11387 765 aaKnown RBP16.47■□□□□ 0.23
TREX1-202ENST00000444177 SNX17Q15036 470 aa16.47■□□□□ 0.23
TREX1-202ENST00000444177 TRIM60Q495X7 471 aa16.47■□□□□ 0.23
TREX1-202ENST00000444177 FGD4Q96M96 766 aa16.47■□□□□ 0.23
TREX1-202ENST00000444177 LBHD1Q9BQE6 289 aaPredicted RBP16.47■□□□□ 0.23
TREX1-202ENST00000444177 ZKSCAN3Q9BRR0 538 aa16.47■□□□□ 0.23
TREX1-202ENST00000444177 HOMER2Q9NSB8 354 aa16.47■□□□□ 0.23
TREX1-202ENST00000444177 PRKAG2Q9UGJ0 569 aa16.47■□□□□ 0.23
TREX1-202ENST00000444177 PRR12Q9ULL5 1215 aa16.47■□□□□ 0.23
TREX1-202ENST00000444177 KDM4AO75164 1064 aa16.46■□□□□ 0.23
TREX1-202ENST00000444177 SNAP25P60880 206 aa16.46■□□□□ 0.23
TREX1-202ENST00000444177 CNTN2Q02246 1040 aa16.46■□□□□ 0.23
TREX1-202ENST00000444177 PTH1RQ03431 593 aa16.46■□□□□ 0.23
TREX1-202ENST00000444177 ACVR2BQ13705 512 aa16.46■□□□□ 0.23
TREX1-202ENST00000444177 C1orf53Q5VUE5 145 aa16.46■□□□□ 0.23
TREX1-202ENST00000444177 LENG1Q96BZ8 264 aaPredicted RBP16.46■□□□□ 0.23
TREX1-202ENST00000444177 TMEM47Q9BQJ4 181 aa16.46■□□□□ 0.23
TREX1-202ENST00000444177 ACAD9Q9H845 621 aa16.46■□□□□ 0.23
TREX1-202ENST00000444177 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.46■□□□□ 0.23
TREX1-202ENST00000444177 ZHX1Q9UKY1 873 aaPredicted RBP16.46■□□□□ 0.23
TREX1-202ENST00000444177 POTEB2H3BUK9 544 aa16.45■□□□□ 0.22
TREX1-202ENST00000444177 ADAMTS4O75173 837 aa16.45■□□□□ 0.22
TREX1-202ENST00000444177 NT5C2P49902 561 aa16.45■□□□□ 0.22
TREX1-202ENST00000444177 TKFCQ3LXA3 575 aa16.45■□□□□ 0.22
TREX1-202ENST00000444177 BMP2KLQ5H9B9 411 aa16.45■□□□□ 0.22
TREX1-202ENST00000444177 CCDC174Q6PII3 467 aa16.45■□□□□ 0.22
TREX1-202ENST00000444177 IQCA1Q86XH1 822 aa16.45■□□□□ 0.22
TREX1-202ENST00000444177 DCAF4Q8WV16 495 aa16.45■□□□□ 0.22
TREX1-202ENST00000444177 TRERF1Q96PN7 1200 aa16.45■□□□□ 0.22
TREX1-202ENST00000444177 KRT23Q9C075 422 aa16.45■□□□□ 0.22
TREX1-202ENST00000444177 ABHD16BQ9H3Z7 469 aa16.45■□□□□ 0.22
TREX1-202ENST00000444177 CNNM2Q9H8M5 875 aa16.45■□□□□ 0.22
TREX1-202ENST00000444177 RNF146Q9NTX7 359 aa16.45■□□□□ 0.22
TREX1-202ENST00000444177 U3KPZ7 1027 aaPredicted RBP16.45■□□□□ 0.22
TREX1-202ENST00000444177 FRMPD2Q68DX3 1309 aaPredicted RBP16.45■□□□□ 0.22
TREX1-202ENST00000444177 DUSP11O75319 330 aaKnown RBP16.44■□□□□ 0.22
TREX1-202ENST00000444177 ALAS1P13196 640 aa16.44■□□□□ 0.22
TREX1-202ENST00000444177 TLE2Q04725 743 aa16.44■□□□□ 0.22
TREX1-202ENST00000444177 TTBK2Q6IQ55 1244 aa16.44■□□□□ 0.22
TREX1-202ENST00000444177 GPR153Q6NV75 609 aa16.44■□□□□ 0.22
TREX1-202ENST00000444177 ARMCX2Q7L311 632 aa16.44■□□□□ 0.22
TREX1-202ENST00000444177 FAM133AQ8N9E0 248 aa16.44■□□□□ 0.22
TREX1-202ENST00000444177 KLHDC9Q8NEP7 349 aa16.44■□□□□ 0.22
TREX1-202ENST00000444177 TSEN34Q9BSV6 310 aaKnown RBP16.44■□□□□ 0.22
TREX1-202ENST00000444177 A1CFQ9NQ94 594 aaKnown RBP16.44■□□□□ 0.22
TREX1-202ENST00000444177 A0A1W2PQ45 241 aaPredicted RBP16.43■□□□□ 0.22
TREX1-202ENST00000444177 A0A1W2PQY0 241 aa16.43■□□□□ 0.22
TREX1-202ENST00000444177 TRIM43BA6NCK2 446 aa16.43■□□□□ 0.22
TREX1-202ENST00000444177 CYP21A2P08686 494 aa16.43■□□□□ 0.22
TREX1-202ENST00000444177 ACLYP53396 1101 aa16.43■□□□□ 0.22
TREX1-202ENST00000444177 KCNA10Q16322 511 aa16.43■□□□□ 0.22
TREX1-202ENST00000444177 CCDC144BQ3MJ40 725 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms