RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 ZNF543Q08ER8 600 aa26■■□□□ 1.75
HDLBP-220ENST00000442730 CCDC178Q5BJE1 867 aa26■■□□□ 1.75
HDLBP-220ENST00000442730 PRAMEF19Q5SWL8 479 aa26■■□□□ 1.75
HDLBP-220ENST00000442730 SYDE2Q5VT97 1194 aa26■■□□□ 1.75
HDLBP-220ENST00000442730 ENAHQ8N8S7 591 aaPredicted RBP26■■□□□ 1.75
HDLBP-220ENST00000442730 ANKS1AQ92625 1134 aa26■■□□□ 1.75
HDLBP-220ENST00000442730 DDX11Q96FC9 970 aa26■■□□□ 1.75
HDLBP-220ENST00000442730 RANBP17Q9H2T7 1088 aaKnown RBP26■■□□□ 1.75
HDLBP-220ENST00000442730 C11orf49Q9H6J7 331 aa26■■□□□ 1.75
HDLBP-220ENST00000442730 ACAD9Q9H845 621 aa26■■□□□ 1.75
HDLBP-220ENST00000442730 GPCPD1Q9NPB8 672 aa26■■□□□ 1.75
HDLBP-220ENST00000442730 RNF146Q9NTX7 359 aa26■■□□□ 1.75
HDLBP-220ENST00000442730 ZSWIM5Q9P217 1185 aa26■■□□□ 1.75
HDLBP-220ENST00000442730 NRBP1Q9UHY1 535 aa26■■□□□ 1.75
HDLBP-220ENST00000442730 PFASO15067 1338 aa25.99■■□□□ 1.75
HDLBP-220ENST00000442730 TNKSO95271 1327 aa25.99■■□□□ 1.75
HDLBP-220ENST00000442730 SEPT4O43236 478 aa25.99■■□□□ 1.75
HDLBP-220ENST00000442730 COL6A1P12109 1028 aa25.99■■□□□ 1.75
HDLBP-220ENST00000442730 TKFCQ3LXA3 575 aa25.99■■□□□ 1.75
HDLBP-220ENST00000442730 ANKRD35Q8N283 1001 aa25.99■■□□□ 1.75
HDLBP-220ENST00000442730 U3KPZ7 1027 aaPredicted RBP25.99■■□□□ 1.75
HDLBP-220ENST00000442730 ALPK3Q96L96 1907 aa25.98■■□□□ 1.75
HDLBP-220ENST00000442730 CYP21A2P08686 494 aa25.98■■□□□ 1.75
HDLBP-220ENST00000442730 MSL3Q8N5Y2 521 aaKnown RBP25.98■■□□□ 1.75
HDLBP-220ENST00000442730 FGD4Q96M96 766 aa25.98■■□□□ 1.75
HDLBP-220ENST00000442730 SYNGAP1Q96PV0 1343 aa25.97■■□□□ 1.75
HDLBP-220ENST00000442730 ICAM1P05362 532 aa25.97■■□□□ 1.75
HDLBP-220ENST00000442730 TAL1P17542 331 aaPredicted RBP25.97■■□□□ 1.75
HDLBP-220ENST00000442730 ZNF467Q7Z7K2 595 aaPredicted RBP25.97■■□□□ 1.75
HDLBP-220ENST00000442730 PNMA1Q8ND90 353 aa25.97■■□□□ 1.75
HDLBP-220ENST00000442730 TRERF1Q96PN7 1200 aa25.97■■□□□ 1.75
HDLBP-220ENST00000442730 KAT14Q9H8E8 782 aa25.97■■□□□ 1.75
HDLBP-220ENST00000442730 CCPG1Q9ULG6 757 aa25.97■■□□□ 1.75
HDLBP-220ENST00000442730 TAF6LQ9Y6J9 622 aa25.97■■□□□ 1.75
HDLBP-220ENST00000442730 ALAS1P13196 640 aa25.96■■□□□ 1.75
HDLBP-220ENST00000442730 BMP2KLQ5H9B9 411 aa25.96■■□□□ 1.75
HDLBP-220ENST00000442730 MAMDC4Q6UXC1 1216 aa25.96■■□□□ 1.75
HDLBP-220ENST00000442730 UBAC1Q9BSL1 405 aa25.96■■□□□ 1.75
HDLBP-220ENST00000442730 A1CFQ9NQ94 594 aaKnown RBP25.96■■□□□ 1.75
HDLBP-220ENST00000442730 EVI5O60447 810 aa25.95■■□□□ 1.74
HDLBP-220ENST00000442730 GPATCH4Q5T3I0 446 aaKnown RBP25.95■■□□□ 1.74
HDLBP-220ENST00000442730 ANO1Q5XXA6 986 aa25.95■■□□□ 1.74
HDLBP-220ENST00000442730 CYB5R4Q7L1T6 521 aa25.95■■□□□ 1.74
HDLBP-220ENST00000442730 MAP4K1Q92918 833 aa25.95■■□□□ 1.74
HDLBP-220ENST00000442730 CNPY2Q9Y2B0 182 aa25.95■■□□□ 1.74
HDLBP-220ENST00000442730 NR2E3Q9Y5X4 410 aa25.95■■□□□ 1.74
HDLBP-220ENST00000442730 DNM1LO00429 736 aa25.94■■□□□ 1.74
HDLBP-220ENST00000442730 ZNF865P0CJ78 1059 aaPredicted RBP25.94■■□□□ 1.74
HDLBP-220ENST00000442730 GOLGA8HP0CJ92 632 aa25.94■■□□□ 1.74
HDLBP-220ENST00000442730 MUM1L1Q5H9M0 696 aa25.94■■□□□ 1.74
HDLBP-220ENST00000442730 FAM133AQ8N9E0 248 aa25.94■■□□□ 1.74
HDLBP-220ENST00000442730 SNAI1O95863 264 aaPredicted RBP25.93■■□□□ 1.74
HDLBP-220ENST00000442730 CNTN2Q02246 1040 aa25.93■■□□□ 1.74
HDLBP-220ENST00000442730 TRDNQ13061 729 aa25.93■■□□□ 1.74
HDLBP-220ENST00000442730 STOX1Q6ZVD7 989 aa25.93■■□□□ 1.74
HDLBP-220ENST00000442730 ESYT1Q9BSJ8 1104 aa25.93■■□□□ 1.74
HDLBP-220ENST00000442730 RBM8AQ9Y5S9 174 aaKnown RBP25.93■■□□□ 1.74
HDLBP-220ENST00000442730 POTEB2H3BUK9 544 aa25.92■■□□□ 1.74
HDLBP-220ENST00000442730 SEC23AQ15436 765 aa25.92■■□□□ 1.74
HDLBP-220ENST00000442730 CCDC136Q96JN2 1154 aa25.92■■□□□ 1.74
HDLBP-220ENST00000442730 LSG1Q9H089 658 aaKnown RBP25.92■■□□□ 1.74
HDLBP-220ENST00000442730 RANBP2P49792 3224 aaKnown RBP25.91■■□□□ 1.74
HDLBP-220ENST00000442730 E7EWF7 191 aa25.91■■□□□ 1.74
HDLBP-220ENST00000442730 IFIT1BQ5T764 474 aaKnown RBP25.91■■□□□ 1.74
HDLBP-220ENST00000442730 CPVLQ9H3G5 476 aa25.91■■□□□ 1.74
HDLBP-220ENST00000442730 CYP39A1Q9NYL5 469 aa25.91■■□□□ 1.74
HDLBP-220ENST00000442730 WDR19Q8NEZ3 1342 aa25.9■■□□□ 1.74
HDLBP-220ENST00000442730 AKR1A1P14550 325 aa25.9■■□□□ 1.74
HDLBP-220ENST00000442730 ASPRV1Q53RT3 343 aa25.9■■□□□ 1.74
HDLBP-220ENST00000442730 GJC2Q5T442 439 aaPredicted RBP25.9■■□□□ 1.74
HDLBP-220ENST00000442730 KIAA1211Q6ZU35 1233 aa25.9■■□□□ 1.74
HDLBP-220ENST00000442730 ARMCX2Q7L311 632 aa25.9■■□□□ 1.74
HDLBP-220ENST00000442730 C7orf61Q8IZ16 206 aa25.9■■□□□ 1.74
HDLBP-220ENST00000442730 ARRDC4Q8NCT1 418 aa25.9■■□□□ 1.74
HDLBP-220ENST00000442730 LENG1Q96BZ8 264 aaPredicted RBP25.9■■□□□ 1.74
HDLBP-220ENST00000442730 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.9■■□□□ 1.74
HDLBP-220ENST00000442730 ASTN1O14525 1302 aa25.89■■□□□ 1.74
HDLBP-220ENST00000442730 SOWAHBA6NEL2 793 aa25.89■■□□□ 1.74
HDLBP-220ENST00000442730 RARBP10826 455 aa25.89■■□□□ 1.74
HDLBP-220ENST00000442730 RALYLQ86SE5 291 aaKnown RBP25.89■■□□□ 1.74
HDLBP-220ENST00000442730 CCDC144CPQ8IYA2 1237 aa25.89■■□□□ 1.74
HDLBP-220ENST00000442730 UBA5Q9GZZ9 404 aa25.89■■□□□ 1.74
HDLBP-220ENST00000442730 XPNPEP3Q9NQH7 507 aa25.89■■□□□ 1.74
HDLBP-220ENST00000442730 ZHX1Q9UKY1 873 aaPredicted RBP25.89■■□□□ 1.74
HDLBP-220ENST00000442730 PNMA2Q9UL42 364 aa25.89■■□□□ 1.74
HDLBP-220ENST00000442730 LRRC37A2A6NM11 1700 aa25.88■■□□□ 1.73
HDLBP-220ENST00000442730 LCTP09848 1927 aa25.88■■□□□ 1.73
HDLBP-220ENST00000442730 NFIBO00712 420 aa25.88■■□□□ 1.73
HDLBP-220ENST00000442730 PARP1P09874 1014 aaKnown RBP25.88■■□□□ 1.73
HDLBP-220ENST00000442730 LRRC41Q15345 812 aa25.88■■□□□ 1.73
HDLBP-220ENST00000442730 LRRC26Q2I0M4 334 aa25.88■■□□□ 1.73
HDLBP-220ENST00000442730 NSMFQ6X4W1 530 aa25.88■■□□□ 1.73
HDLBP-220ENST00000442730 NCOA7Q8NI08 942 aa25.88■■□□□ 1.73
HDLBP-220ENST00000442730 SENP6Q9GZR1 1112 aaPredicted RBP25.88■■□□□ 1.73
HDLBP-220ENST00000442730 SMCHD1A6NHR9 2005 aa25.87■■□□□ 1.73
HDLBP-220ENST00000442730 KBTBD13C9JR72 458 aa25.87■■□□□ 1.73
HDLBP-220ENST00000442730 ACVR2BQ13705 512 aa25.87■■□□□ 1.73
HDLBP-220ENST00000442730 CLEC4DQ8WXI8 215 aa25.87■■□□□ 1.73
HDLBP-220ENST00000442730 KATNBL1Q9H079 304 aa25.87■■□□□ 1.73
HDLBP-220ENST00000442730 ABHD16BQ9H3Z7 469 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms