RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.95□□□□□ -0.82
TOP3B-209ENST00000442653 ZNF467Q7Z7K2 595 aaPredicted RBP9.95□□□□□ -0.82
TOP3B-209ENST00000442653 GMCL1P1Q8NEA9 526 aa9.95□□□□□ -0.82
TOP3B-209ENST00000442653 OTUD7AQ8TE49 926 aaPredicted RBP9.95□□□□□ -0.82
TOP3B-209ENST00000442653 SEC62Q99442 399 aaKnown RBP9.95□□□□□ -0.82
TOP3B-209ENST00000442653 STARD7Q9NQZ5 370 aa9.95□□□□□ -0.82
TOP3B-209ENST00000442653 HOMER2Q9NSB8 354 aa9.95□□□□□ -0.82
TOP3B-209ENST00000442653 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.95□□□□□ -0.82
TOP3B-209ENST00000442653 FAM184BQ9ULE4 1060 aa9.95□□□□□ -0.82
TOP3B-209ENST00000442653 PLIN4Q96Q06 1357 aa9.95□□□□□ -0.82
TOP3B-209ENST00000442653 MOXD2PA6NHM9 499 aa9.94□□□□□ -0.82
TOP3B-209ENST00000442653 DCDC2CA8MYV0 355 aa9.94□□□□□ -0.82
TOP3B-209ENST00000442653 CTAGE5O15320 804 aa9.94□□□□□ -0.82
TOP3B-209ENST00000442653 TTLL1O95922 423 aa9.94□□□□□ -0.82
TOP3B-209ENST00000442653 ZFYP08048 801 aaPredicted RBP9.94□□□□□ -0.82
TOP3B-209ENST00000442653 C6orf222P0C671 652 aaPredicted RBP9.94□□□□□ -0.82
TOP3B-209ENST00000442653 GNAT2P19087 354 aa9.94□□□□□ -0.82
TOP3B-209ENST00000442653 CST5P28325 142 aaPredicted RBP9.94□□□□□ -0.82
TOP3B-209ENST00000442653 CNTN2Q02246 1040 aa9.94□□□□□ -0.82
TOP3B-209ENST00000442653 ARMCX2Q7L311 632 aa9.94□□□□□ -0.82
TOP3B-209ENST00000442653 CCDC144CPQ8IYA2 1237 aa9.94□□□□□ -0.82
TOP3B-209ENST00000442653 IFNL3Q8IZI9 196 aa9.94□□□□□ -0.82
TOP3B-209ENST00000442653 ZNF444Q8N0Y2 327 aaPredicted RBP9.94□□□□□ -0.82
TOP3B-209ENST00000442653 ANKRD35Q8N283 1001 aa9.94□□□□□ -0.82
TOP3B-209ENST00000442653 NUP133Q8WUM0 1156 aa9.94□□□□□ -0.82
TOP3B-209ENST00000442653 CHMP4CQ96CF2 233 aa9.94□□□□□ -0.82
TOP3B-209ENST00000442653 GPATCH3Q96I76 525 aa9.94□□□□□ -0.82
TOP3B-209ENST00000442653 KATNBL1Q9H079 304 aa9.94□□□□□ -0.82
TOP3B-209ENST00000442653 ABHD16BQ9H3Z7 469 aa9.94□□□□□ -0.82
TOP3B-209ENST00000442653 FEM1BQ9UK73 627 aa9.94□□□□□ -0.82
TOP3B-209ENST00000442653 SYNPO2Q9UMS6 1093 aa9.94□□□□□ -0.82
TOP3B-209ENST00000442653 DDX49Q9Y6V7 483 aaKnown RBP9.94□□□□□ -0.82
TOP3B-209ENST00000442653 ASTN1O14525 1302 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 ZNF536O15090 1300 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 ELP1O95163 1332 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 PATL2C9JE40 543 aaKnown RBP9.93□□□□□ -0.82
TOP3B-209ENST00000442653 FOXP2O15409 715 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 TIMP1P01033 207 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 ASGR1P07306 291 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 BMP3P12645 472 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 FOSL2P15408 326 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 PTGS1P23219 599 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 CDK7P50613 346 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 OAZ1P54368 228 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 GJA9P57773 515 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 GRIN2CQ14957 1233 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 SLFN13Q68D06 897 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 C16orf59Q7L2K0 433 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 RASGRP2Q7LDG7 609 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 FAM133AQ8N9E0 248 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 CHST13Q8NET6 341 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 NEDD1Q8NHV4 660 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 PI4K2BQ8TCG2 481 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 GLT1D1Q96MS3 346 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 UPF3AQ9H1J1 476 aaKnown RBP9.93□□□□□ -0.82
TOP3B-209ENST00000442653 ZNF287Q9HBT7 754 aa9.93□□□□□ -0.82
TOP3B-209ENST00000442653 TMEM265A0A087WTH1 108 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.92□□□□□ -0.82
TOP3B-209ENST00000442653 SOWAHBA6NEL2 793 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 TMEM232C9JQI7 657 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 NMT2O60551 498 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 TSPY3P0CV98 308 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 TSPY8P0CW00 308 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 DNAJB2P25686 324 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 BEX3Q00994 111 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 TFAP4Q01664 338 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 PPARAQ07869 468 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 GNASQ5JWF2 1037 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 MFSD5Q6N075 450 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 FAM126BQ8IXS8 530 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 USP38Q8NB14 1042 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 PCSK9Q8NBP7 692 aaKnown RBP9.92□□□□□ -0.82
TOP3B-209ENST00000442653 AGBL1Q96MI9 1066 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.92□□□□□ -0.826e-10■■□□□ 14.2
TOP3B-209ENST00000442653 NACAP1Q9BZK3 213 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 A1CFQ9NQ94 594 aaKnown RBP9.92□□□□□ -0.82
TOP3B-209ENST00000442653 INCENPQ9NQS7 918 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 RNF146Q9NTX7 359 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 FBXO40Q9UH90 709 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 ISY1Q9ULR0 285 aaKnown RBP9.92□□□□□ -0.82
TOP3B-209ENST00000442653 CTDP1Q9Y5B0 961 aaPredicted RBP9.92□□□□□ -0.82
TOP3B-209ENST00000442653 PCDHB15Q9Y5E8 787 aa9.92□□□□□ -0.82
TOP3B-209ENST00000442653 LRRC37A2A6NM11 1700 aa9.91□□□□□ -0.82
TOP3B-209ENST00000442653 MROH7Q68CQ1 1323 aa9.91□□□□□ -0.82
TOP3B-209ENST00000442653 TTC41PQ6P2S7 1318 aa9.91□□□□□ -0.82
TOP3B-209ENST00000442653 ARVCFO00192 962 aa9.91□□□□□ -0.82
TOP3B-209ENST00000442653 CSF2RAP15509 400 aa9.91□□□□□ -0.82
TOP3B-209ENST00000442653 MCCP23508 829 aa9.91□□□□□ -0.82
TOP3B-209ENST00000442653 PBX2P40425 430 aa9.91□□□□□ -0.82
TOP3B-209ENST00000442653 STAT2P52630 851 aa9.91□□□□□ -0.82
TOP3B-209ENST00000442653 SNAP25P60880 206 aa9.91□□□□□ -0.82
TOP3B-209ENST00000442653 NKX3-2P78367 333 aa9.91□□□□□ -0.82
TOP3B-209ENST00000442653 PDE4BQ07343 736 aa9.91□□□□□ -0.82
TOP3B-209ENST00000442653 TMEM240Q5SV17 173 aa9.91□□□□□ -0.82
TOP3B-209ENST00000442653 ZMYM1Q5SVZ6 1142 aa9.91□□□□□ -0.82
TOP3B-209ENST00000442653 TMEM63BQ5T3F8 832 aa9.91□□□□□ -0.82
TOP3B-209ENST00000442653 RASIP1Q5U651 963 aa9.91□□□□□ -0.82
TOP3B-209ENST00000442653 CCDC129Q6ZRS4 1044 aa9.91□□□□□ -0.82
TOP3B-209ENST00000442653 KCTD1Q719H9 257 aa9.91□□□□□ -0.82
TOP3B-209ENST00000442653 VTI1AQ96AJ9 217 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms