RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 PCDHA6Q9UN73 950 aa32.08■■■□□ 2.73
CGREF1-207ENST00000440612 PCDHA8Q9Y5H6 950 aa32.08■■■□□ 2.73
CGREF1-207ENST00000440612 CSPP1Q1MSJ5 1256 aa32.07■■■□□ 2.72
CGREF1-207ENST00000440612 FAM160B2Q86V87 743 aa32.07■■■□□ 2.72
CGREF1-207ENST00000440612 RASGRP4Q8TDF6 673 aa32.07■■■□□ 2.72
CGREF1-207ENST00000440612 CNKSR2Q8WXI2 1034 aa32.07■■■□□ 2.72
CGREF1-207ENST00000440612 PGBD1Q96JS3 809 aa32.07■■■□□ 2.72
CGREF1-207ENST00000440612 CLMNQ96JQ2 1002 aa32.06■■■□□ 2.72
CGREF1-207ENST00000440612 RANBP17Q9H2T7 1088 aaKnown RBP32.06■■■□□ 2.72
CGREF1-207ENST00000440612 PTPAQ15257 358 aa32.05■■■□□ 2.72
CGREF1-207ENST00000440612 RILPL1Q5EBL4 403 aa32.05■■■□□ 2.72
CGREF1-207ENST00000440612 C19orf81C9J6K1 198 aa32.05■■■□□ 2.72
CGREF1-207ENST00000440612 WNT7AO00755 349 aa32.05■■■□□ 2.72
CGREF1-207ENST00000440612 YEATS4O95619 227 aa32.05■■■□□ 2.72
CGREF1-207ENST00000440612 KLHL40Q2TBA0 621 aa32.05■■■□□ 2.72
CGREF1-207ENST00000440612 SKOR2Q2VWA4 1001 aaPredicted RBP32.05■■■□□ 2.72
CGREF1-207ENST00000440612 LDHDQ86WU2 507 aa32.05■■■□□ 2.72
CGREF1-207ENST00000440612 ANKRD13AQ8IZ07 590 aa32.05■■■□□ 2.72
CGREF1-207ENST00000440612 ANP32EQ9BTT0 268 aa32.05■■■□□ 2.72
CGREF1-207ENST00000440612 C6orf50Q9HD87 102 aa32.05■■■□□ 2.72
CGREF1-207ENST00000440612 CSADQ9Y600 493 aa32.05■■■□□ 2.72
CGREF1-207ENST00000440612 DCAF8L1A6NGE4 600 aa32.04■■■□□ 2.72
CGREF1-207ENST00000440612 GNA11P29992 359 aa32.04■■■□□ 2.72
CGREF1-207ENST00000440612 HMGCS2P54868 508 aa32.04■■■□□ 2.72
CGREF1-207ENST00000440612 UBE2HP62256 183 aa32.04■■■□□ 2.72
CGREF1-207ENST00000440612 SF3A1Q15459 793 aaKnown RBP32.04■■■□□ 2.72
CGREF1-207ENST00000440612 SH3D19Q5HYK7 790 aa32.04■■■□□ 2.72
CGREF1-207ENST00000440612 LDLRAD1Q5T700 205 aa32.04■■■□□ 2.72
CGREF1-207ENST00000440612 KIFC2Q96AC6 838 aa32.04■■■□□ 2.72
CGREF1-207ENST00000440612 PCDHA1Q9Y5I3 950 aa32.04■■■□□ 2.72
CGREF1-207ENST00000440612 AMNQ9BXJ7 453 aa32.03■■■□□ 2.72
CGREF1-207ENST00000440612 DDX49Q9Y6V7 483 aaKnown RBP32.03■■■□□ 2.72
CGREF1-207ENST00000440612 SLC39A14Q15043 492 aa32.02■■■□□ 2.72
CGREF1-207ENST00000440612 PIK3AP1Q6ZUJ8 805 aa32.02■■■□□ 2.72
CGREF1-207ENST00000440612 RPAP3Q9H6T3 665 aaPredicted RBP32.02■■■□□ 2.72
CGREF1-207ENST00000440612 RIC8AQ9NPQ8 531 aa32.02■■■□□ 2.72
CGREF1-207ENST00000440612 PCDHB6Q9Y5E3 794 aa32.02■■■□□ 2.72
CGREF1-207ENST00000440612 TAL1P17542 331 aaPredicted RBP32.02■■■□□ 2.72
CGREF1-207ENST00000440612 FBXO11Q86XK2 927 aa32.02■■■□□ 2.72
CGREF1-207ENST00000440612 ELP3Q9H9T3 547 aa32.02■■■□□ 2.72
CGREF1-207ENST00000440612 SPDYE5A6NIY4 337 aa32■■■□□ 2.71
CGREF1-207ENST00000440612 CLK2P49760 499 aaKnown RBP32■■■□□ 2.71
CGREF1-207ENST00000440612 ADCY7P51828 1080 aa32■■■□□ 2.71
CGREF1-207ENST00000440612 PRPF38AQ8NAV1 312 aaKnown RBP32■■■□□ 2.71
CGREF1-207ENST00000440612 SLF1Q9BQI6 1058 aa32■■■□□ 2.71
CGREF1-207ENST00000440612 PPATQ06203 517 aa31.99■■■□□ 2.71
CGREF1-207ENST00000440612 TTLL12Q14166 644 aaPredicted RBP31.99■■■□□ 2.71
CGREF1-207ENST00000440612 ARMC9Q7Z3E5 817 aa31.99■■■□□ 2.71
CGREF1-207ENST00000440612 RBM46Q8TBY0 533 aaKnown RBP31.99■■■□□ 2.71
CGREF1-207ENST00000440612 OPLAHO14841 1288 aa31.99■■■□□ 2.71
CGREF1-207ENST00000440612 STK38Q15208 465 aa31.99■■■□□ 2.71
CGREF1-207ENST00000440612 ERO1BQ86YB8 467 aa31.99■■■□□ 2.71
CGREF1-207ENST00000440612 BICD2Q8TD16 824 aa31.99■■■□□ 2.71
CGREF1-207ENST00000440612 KCNG4Q8TDN1 519 aa31.99■■■□□ 2.71
CGREF1-207ENST00000440612 ZNF526Q8TF50 670 aaPredicted RBP31.99■■■□□ 2.71
CGREF1-207ENST00000440612 TANGO6Q9C0B7 1094 aa31.99■■■□□ 2.71
CGREF1-207ENST00000440612 EIF4ENIF1Q9NRA8 985 aaKnown RBP31.99■■■□□ 2.71
CGREF1-207ENST00000440612 PPP1R9AQ9ULJ8 1098 aa31.99■■■□□ 2.71
CGREF1-207ENST00000440612 ZNF536O15090 1300 aa31.98■■■□□ 2.71
CGREF1-207ENST00000440612 SPTLC2O15270 562 aa31.98■■■□□ 2.71
CGREF1-207ENST00000440612 MBD3O95983 291 aa31.98■■■□□ 2.71
CGREF1-207ENST00000440612 TRAPPC10P48553 1259 aa31.98■■■□□ 2.71
CGREF1-207ENST00000440612 REXO1Q8N1G1 1221 aaKnown RBP31.98■■■□□ 2.71
CGREF1-207ENST00000440612 TMEM260Q9NX78 707 aa31.98■■■□□ 2.71
CGREF1-207ENST00000440612 BIN2Q9UBW5 565 aaPredicted RBP31.98■■■□□ 2.71
CGREF1-207ENST00000440612 PCDHA7Q9UN72 937 aa31.98■■■□□ 2.71
CGREF1-207ENST00000440612 PARP14Q460N5 1801 aa31.97■■■□□ 2.71
CGREF1-207ENST00000440612 IRF6O14896 467 aa31.97■■■□□ 2.71
CGREF1-207ENST00000440612 USH1GQ495M9 461 aa31.97■■■□□ 2.71
CGREF1-207ENST00000440612 PSTPIP2Q9H939 334 aa31.97■■■□□ 2.71
CGREF1-207ENST00000440612 PTPRFP10586 1907 aa31.97■■■□□ 2.71
CGREF1-207ENST00000440612 RLFQ13129 1914 aa31.97■■■□□ 2.71
CGREF1-207ENST00000440612 FLOT1O75955 427 aa31.95■■■□□ 2.71
CGREF1-207ENST00000440612 ATP2B1P20020 1258 aa31.95■■■□□ 2.71
CGREF1-207ENST00000440612 AXDND1Q5T1B0 1012 aaPredicted RBP31.95■■■□□ 2.71
CGREF1-207ENST00000440612 CCDC174Q6PII3 467 aa31.95■■■□□ 2.71
CGREF1-207ENST00000440612 KRT25Q7Z3Z0 450 aa31.95■■■□□ 2.71
CGREF1-207ENST00000440612 CUL5Q93034 780 aa31.95■■■□□ 2.71
CGREF1-207ENST00000440612 OTUD5Q96G74 571 aa31.95■■■□□ 2.71
CGREF1-207ENST00000440612 SLC38A10Q9HBR0 1119 aa31.95■■■□□ 2.71
CGREF1-207ENST00000440612 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.95■■■□□ 2.71
CGREF1-207ENST00000440612 NOL7Q9UMY1 257 aaKnown RBP31.95■■■□□ 2.71
CGREF1-207ENST00000440612 CCDC194A0A1B0GVG4 234 aa31.95■■■□□ 2.7
CGREF1-207ENST00000440612 UBE2SQ16763 222 aa31.95■■■□□ 2.7
CGREF1-207ENST00000440612 TTC38Q5R3I4 469 aa31.95■■■□□ 2.7
CGREF1-207ENST00000440612 JAKMIP3Q5VZ66 844 aa31.95■■■□□ 2.7
CGREF1-207ENST00000440612 KCNH4Q9UQ05 1017 aa31.95■■■□□ 2.7
CGREF1-207ENST00000440612 MORC2Q9Y6X9 1032 aaPredicted RBP31.95■■■□□ 2.7
CGREF1-207ENST00000440612 MEIS2O14770 477 aa31.94■■■□□ 2.7
CGREF1-207ENST00000440612 EDIL3O43854 480 aa31.94■■■□□ 2.7
CGREF1-207ENST00000440612 PPP6R2O75170 966 aa31.94■■■□□ 2.7
CGREF1-207ENST00000440612 MRPL12P52815 198 aaKnown RBP31.94■■■□□ 2.7
CGREF1-207ENST00000440612 CATSPERGQ6ZRH7 1159 aa31.94■■■□□ 2.7
CGREF1-207ENST00000440612 ZNF408Q9H9D4 720 aa31.94■■■□□ 2.7
CGREF1-207ENST00000440612 TMOD4Q9NZQ9 345 aa31.94■■■□□ 2.7
CGREF1-207ENST00000440612 SMCHD1A6NHR9 2005 aa31.94■■■□□ 2.7
CGREF1-207ENST00000440612 A0A0G2JLL6 359 aaPredicted RBP31.93■■■□□ 2.7
CGREF1-207ENST00000440612 ITGBL1O95965 494 aaPredicted RBP31.93■■■□□ 2.7
CGREF1-207ENST00000440612 ME1P48163 572 aa31.93■■■□□ 2.7
CGREF1-207ENST00000440612 PPIL2Q13356 520 aa31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms