RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-213ENST00000440293 GJC2Q5T442 439 aaPredicted RBP21.23■□□□□ 0.99
HDAC7-213ENST00000440293 PRPF38AQ8NAV1 312 aaKnown RBP21.23■□□□□ 0.99
HDAC7-213ENST00000440293 ATG4CQ96DT6 458 aa21.23■□□□□ 0.99
HDAC7-213ENST00000440293 ZKSCAN3Q9BRR0 538 aa21.23■□□□□ 0.99
HDAC7-213ENST00000440293 FBXO28Q9NVF7 368 aa21.23■□□□□ 0.99
HDAC7-213ENST00000440293 FEM1BQ9UK73 627 aa21.23■□□□□ 0.99
HDAC7-213ENST00000440293 PPP1R9AQ9ULJ8 1098 aa21.23■□□□□ 0.99
HDAC7-213ENST00000440293 COPB2P35606 906 aa21.22■□□□□ 0.99
HDAC7-213ENST00000440293 ZNF697Q5TEC3 545 aa21.22■□□□□ 0.99
HDAC7-213ENST00000440293 RCSD1Q6JBY9 416 aa21.22■□□□□ 0.99
HDAC7-213ENST00000440293 MAML3Q96JK9 1138 aa21.22■□□□□ 0.99
HDAC7-213ENST00000440293 SLF1Q9BQI6 1058 aa21.22■□□□□ 0.99
HDAC7-213ENST00000440293 A0A0G2JMZ2 1700 aa21.21■□□□□ 0.99
HDAC7-213ENST00000440293 CUL9Q8IWT3 2517 aa21.21■□□□□ 0.99
HDAC7-213ENST00000440293 E7EWF7 191 aa21.21■□□□□ 0.99
HDAC7-213ENST00000440293 NCAPG2Q86XI2 1143 aa21.21■□□□□ 0.99
HDAC7-213ENST00000440293 ANKS1AQ92625 1134 aa21.21■□□□□ 0.99
HDAC7-213ENST00000440293 GUCD1Q96NT3 240 aa21.21■□□□□ 0.99
HDAC7-213ENST00000440293 ZSCAN10Q96SZ4 725 aaPredicted RBP21.21■□□□□ 0.99
HDAC7-213ENST00000440293 ISY1Q9ULR0 285 aaKnown RBP21.21■□□□□ 0.99
HDAC7-213ENST00000440293 ATP11BQ9Y2G3 1177 aa21.21■□□□□ 0.99
HDAC7-213ENST00000440293 VWA5AO00534 786 aa21.2■□□□□ 0.98
HDAC7-213ENST00000440293 PLS1Q14651 629 aa21.2■□□□□ 0.98
HDAC7-213ENST00000440293 NECTIN1Q15223 517 aa21.2■□□□□ 0.98
HDAC7-213ENST00000440293 LRRC41Q15345 812 aa21.2■□□□□ 0.98
HDAC7-213ENST00000440293 RALYLQ86SE5 291 aaKnown RBP21.2■□□□□ 0.98
HDAC7-213ENST00000440293 RIOX2Q8IUF8 465 aa21.2■□□□□ 0.98
HDAC7-213ENST00000440293 NCOA7Q8NI08 942 aa21.2■□□□□ 0.98
HDAC7-213ENST00000440293 CHURC1Q8WUH1 139 aa21.2■□□□□ 0.98
HDAC7-213ENST00000440293 DCAF4Q8WV16 495 aa21.2■□□□□ 0.98
HDAC7-213ENST00000440293 UBAC1Q9BSL1 405 aa21.2■□□□□ 0.98
HDAC7-213ENST00000440293 LAMA2P24043 3122 aaKnown RBP21.19■□□□□ 0.98
HDAC7-213ENST00000440293 TMEM232C9JQI7 657 aa21.19■□□□□ 0.98
HDAC7-213ENST00000440293 ZBED4O75132 1171 aa21.19■□□□□ 0.98
HDAC7-213ENST00000440293 SMAD3P84022 425 aaKnown RBP21.19■□□□□ 0.98
HDAC7-213ENST00000440293 TMEM132BQ14DG7 1078 aa21.19■□□□□ 0.98
HDAC7-213ENST00000440293 FAM160B2Q86V87 743 aa21.19■□□□□ 0.98
HDAC7-213ENST00000440293 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.19■□□□□ 0.98
HDAC7-213ENST00000440293 MSL3Q8N5Y2 521 aaKnown RBP21.19■□□□□ 0.98
HDAC7-213ENST00000440293 KIFC2Q96AC6 838 aa21.19■□□□□ 0.98
HDAC7-213ENST00000440293 CHMP4CQ96CF2 233 aa21.19■□□□□ 0.98
HDAC7-213ENST00000440293 PHF24Q9UPV7 400 aa21.19■□□□□ 0.98
HDAC7-213ENST00000440293 MTMR7Q9Y216 660 aa21.19■□□□□ 0.98
HDAC7-213ENST00000440293 CTDP1Q9Y5B0 961 aaPredicted RBP21.19■□□□□ 0.98
HDAC7-213ENST00000440293 RLFQ13129 1914 aa21.19■□□□□ 0.98
HDAC7-213ENST00000440293 SLC27A2O14975 620 aa21.18■□□□□ 0.98
HDAC7-213ENST00000440293 PLA2G6O60733 806 aa21.18■□□□□ 0.98
HDAC7-213ENST00000440293 RARBP10826 455 aa21.18■□□□□ 0.98
HDAC7-213ENST00000440293 CREB3L3Q68CJ9 461 aa21.18■□□□□ 0.98
HDAC7-213ENST00000440293 KAT14Q9H8E8 782 aa21.18■□□□□ 0.98
HDAC7-213ENST00000440293 TAF6LQ9Y6J9 622 aa21.18■□□□□ 0.98
HDAC7-213ENST00000440293 UNC80Q8N2C7 3258 aa21.17■□□□□ 0.98
HDAC7-213ENST00000440293 FDX1P10109 184 aa21.17■□□□□ 0.98
HDAC7-213ENST00000440293 STAT3P40763 770 aa21.17■□□□□ 0.98
HDAC7-213ENST00000440293 ADCYAP1R1P41586 468 aa21.17■□□□□ 0.98
HDAC7-213ENST00000440293 STAT2P52630 851 aa21.17■□□□□ 0.98
HDAC7-213ENST00000440293 IKQ13123 557 aaPredicted RBP21.17■□□□□ 0.98
HDAC7-213ENST00000440293 KCTD2Q14681 263 aa21.17■□□□□ 0.98
HDAC7-213ENST00000440293 SHHQ15465 462 aa21.17■□□□□ 0.98
HDAC7-213ENST00000440293 TRIM60Q495X7 471 aa21.17■□□□□ 0.98
HDAC7-213ENST00000440293 RNF20Q5VTR2 975 aa21.17■□□□□ 0.98
HDAC7-213ENST00000440293 STOX1Q6ZVD7 989 aa21.17■□□□□ 0.98
HDAC7-213ENST00000440293 KCTD1Q719H9 257 aa21.17■□□□□ 0.98
HDAC7-213ENST00000440293 CYB5R4Q7L1T6 521 aa21.17■□□□□ 0.98
HDAC7-213ENST00000440293 RNF180Q86T96 592 aa21.17■□□□□ 0.98
HDAC7-213ENST00000440293 ENAHQ8N8S7 591 aaPredicted RBP21.17■□□□□ 0.98
HDAC7-213ENST00000440293 MMP19Q99542 508 aa21.17■□□□□ 0.98
HDAC7-213ENST00000440293 TINF2Q9BSI4 451 aa21.17■□□□□ 0.98
HDAC7-213ENST00000440293 PDLIM7Q9NR12 457 aa21.17■□□□□ 0.98
HDAC7-213ENST00000440293 TNKSO95271 1327 aa21.17■□□□□ 0.98
HDAC7-213ENST00000440293 TMEM265A0A087WTH1 108 aa21.16■□□□□ 0.98
HDAC7-213ENST00000440293 CCDC96Q2M329 555 aa21.16■□□□□ 0.98
HDAC7-213ENST00000440293 ZNF792Q3KQV3 632 aa21.16■□□□□ 0.98
HDAC7-213ENST00000440293 PRAMEF19Q5SWL8 479 aa21.16■□□□□ 0.98
HDAC7-213ENST00000440293 REPS2Q8NFH8 660 aa21.16■□□□□ 0.98
HDAC7-213ENST00000440293 TSEN34Q9BSV6 310 aaKnown RBP21.16■□□□□ 0.98
HDAC7-213ENST00000440293 XPNPEP3Q9NQH7 507 aa21.16■□□□□ 0.98
HDAC7-213ENST00000440293 ERICH2A1L162 156 aa21.15■□□□□ 0.98
HDAC7-213ENST00000440293 PDHBP11177 359 aa21.15■□□□□ 0.98
HDAC7-213ENST00000440293 IFIT1BQ5T764 474 aaKnown RBP21.15■□□□□ 0.98
HDAC7-213ENST00000440293 PNMA1Q8ND90 353 aa21.15■□□□□ 0.98
HDAC7-213ENST00000440293 BADQ92934 168 aa21.15■□□□□ 0.98
HDAC7-213ENST00000440293 SEMA6BQ9H3T3 888 aa21.15■□□□□ 0.98
HDAC7-213ENST00000440293 SLC38A10Q9HBR0 1119 aa21.15■□□□□ 0.98
HDAC7-213ENST00000440293 PRDM5Q9NQX1 630 aaPredicted RBP21.15■□□□□ 0.98
HDAC7-213ENST00000440293 ZNF214Q9UL59 606 aaPredicted RBP21.15■□□□□ 0.98
HDAC7-213ENST00000440293 MYH4Q9Y623 1939 aa21.14■□□□□ 0.98
HDAC7-213ENST00000440293 LTBP2Q14767 1821 aa21.14■□□□□ 0.97
HDAC7-213ENST00000440293 IFIT3O14879 490 aaKnown RBP21.14■□□□□ 0.97
HDAC7-213ENST00000440293 REC8O95072 547 aa21.14■□□□□ 0.97
HDAC7-213ENST00000440293 AKR1A1P14550 325 aa21.14■□□□□ 0.97
HDAC7-213ENST00000440293 SART3Q15020 963 aaKnown RBP21.14■□□□□ 0.97
HDAC7-213ENST00000440293 SEC23AQ15436 765 aa21.14■□□□□ 0.97
HDAC7-213ENST00000440293 ANO1Q5XXA6 986 aa21.14■□□□□ 0.97
HDAC7-213ENST00000440293 TOX2Q96NM4 488 aa21.14■□□□□ 0.97
HDAC7-213ENST00000440293 COL25A1Q9BXS0 654 aaPredicted RBP21.14■□□□□ 0.97
HDAC7-213ENST00000440293 TRIM43BA6NCK2 446 aa21.13■□□□□ 0.97
HDAC7-213ENST00000440293 ATP2A1O14983 1001 aa21.13■□□□□ 0.97
HDAC7-213ENST00000440293 KIAA0355O15063 1070 aa21.13■□□□□ 0.97
HDAC7-213ENST00000440293 SNHG28P0DPA3 235 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms